RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeastyeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPS1YJL172W NNF2P53253 936 aa5.75□□□□□ -1.49
CPS1YJL172W LAM6Q08001 693 aa5.75□□□□□ -1.49
CPS1YJL172W PTC3P34221 468 aaKnown RBP5.74□□□□□ -1.49
CPS1YJL172W DOT5P40553 215 aa5.74□□□□□ -1.49
CPS1YJL172W ATG13Q06628 738 aa5.74□□□□□ -1.49
CPS1YJL172W SIR4P11978 1358 aa5.73□□□□□ -1.49
CPS1YJL172W RPP0P05317 312 aaKnown RBP5.73□□□□□ -1.49
CPS1YJL172W UBP1P25037 809 aa5.73□□□□□ -1.49
CPS1YJL172W PEA2P40091 420 aa5.73□□□□□ -1.49
CPS1YJL172W TGL3P40308 642 aa5.73□□□□□ -1.49
CPS1YJL172W AOS1Q06624 347 aa5.73□□□□□ -1.49
CPS1YJL172W YDL144CQ07589 356 aa5.73□□□□□ -1.49
CPS1YJL172W YRF1-2P40105 1681 aa5.72□□□□□ -1.49
CPS1YJL172W PRD1P25375 712 aa5.72□□□□□ -1.49
CPS1YJL172W PRP40P33203 583 aaKnown RBP5.72□□□□□ -1.49
CPS1YJL172W RRP46P53256 223 aaPredicted RBP5.72□□□□□ -1.49
CPS1YJL172W DOS2P54858 310 aa5.72□□□□□ -1.49
CPS1YJL172W YRF1-4O13559 1382 aa5.72□□□□□ -1.49
CPS1YJL172W MCM1P11746 286 aa5.71□□□□□ -1.49
CPS1YJL172W TAF13P11747 167 aa5.71□□□□□ -1.49
CPS1YJL172W DAL5P15365 543 aa5.71□□□□□ -1.49
CPS1YJL172W EDE1P34216 1381 aa5.71□□□□□ -1.5
CPS1YJL172W COBP00163 385 aa5.71□□□□□ -1.5
CPS1YJL172W ROX1P25042 368 aa5.71□□□□□ -1.5
CPS1YJL172W CDC11P32458 415 aa5.71□□□□□ -1.5
CPS1YJL172W VPS27P40343 622 aaKnown RBP5.71□□□□□ -1.5
CPS1YJL172W MSH4P40965 878 aaPredicted RBP5.71□□□□□ -1.5
CPS1YJL172W RPN11P43588 306 aaKnown RBP5.71□□□□□ -1.5
CPS1YJL172W ADE16P54113 591 aaKnown RBP5.71□□□□□ -1.5
CPS1YJL172W FOX2Q02207 900 aaKnown RBP5.71□□□□□ -1.5
CPS1YJL172W FRK1Q03002 865 aaPredicted RBP5.71□□□□□ -1.5
CPS1YJL172W VMA1P17255 1071 aaKnown RBP5.7□□□□□ -1.5
CPS1YJL172W NTH2P35172 780 aa5.7□□□□□ -1.5
CPS1YJL172W YAP5P40574 245 aa5.7□□□□□ -1.5
CPS1YJL172W REF2P42073 533 aaPredicted RBP5.7□□□□□ -1.5
CPS1YJL172W OSW7P43611 510 aa5.7□□□□□ -1.5
CPS1YJL172W ZDS1P50111 915 aaKnown RBP5.7□□□□□ -1.5
CPS1YJL172W YNL050CP53952 270 aa5.7□□□□□ -1.5
CPS1YJL172W INP54Q08227 384 aaKnown RBP5.7□□□□□ -1.5
CPS1YJL172W HSC82P15108 705 aaKnown RBP5.69□□□□□ -1.5
CPS1YJL172W OSM1P21375 501 aaKnown RBP5.69□□□□□ -1.5
CPS1YJL172W SEC9P40357 651 aa5.69□□□□□ -1.5
CPS1YJL172W YIR014WP40570 242 aa5.69□□□□□ -1.5
CPS1YJL172W CDC45Q08032 650 aa5.69□□□□□ -1.5
CPS1YJL172W KCC4P25389 1037 aa5.68□□□□□ -1.5
CPS1YJL172W UGA3P26370 528 aa5.68□□□□□ -1.5
CPS1YJL172W MAM1P40065 302 aa5.68□□□□□ -1.5
CPS1YJL172W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
CPS1YJL172W YBP2P53169 641 aa5.68□□□□□ -1.5
CPS1YJL172W RTS3P53289 263 aa5.68□□□□□ -1.5
CPS1YJL172W NSE3Q05541 303 aa5.68□□□□□ -1.5
CPS1YJL172W APL5Q08951 932 aaKnown RBP5.68□□□□□ -1.5
CPS1YJL172W DIT2P21595 489 aa5.68□□□□□ -1.5
CPS1YJL172W MSH3P25336 1018 aa5.68□□□□□ -1.5
CPS1YJL172W RRP14P36080 434 aaKnown RBP5.68□□□□□ -1.5
CPS1YJL172W SLX8P40072 274 aa5.68□□□□□ -1.5
CPS1YJL172W ECM16Q04217 1267 aaKnown RBP5.68□□□□□ -1.5
CPS1YJL172W RPN7Q06103 429 aaKnown RBP5.68□□□□□ -1.5
CPS1YJL172W APC1P53886 1748 aa5.68□□□□□ -1.5
CPS1YJL172W FKS3Q04952 1785 aa5.68□□□□□ -1.5
CPS1YJL172W PET111P08468 800 aa5.67□□□□□ -1.5
CPS1YJL172W HOS4P40480 1083 aa5.67□□□□□ -1.5
CPS1YJL172W NUP42P49686 430 aaKnown RBP5.67□□□□□ -1.5
CPS1YJL172W THI22Q06490 572 aa5.67□□□□□ -1.5
CPS1YJL172W TY1B-AO13527 1196 aaKnown RBP5.66□□□□□ -1.5
CPS1YJL172W GRX1P25373 110 aaKnown RBP5.66□□□□□ -1.5
CPS1YJL172W TPD3P31383 635 aa5.66□□□□□ -1.5
CPS1YJL172W CBF5P33322 483 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CPS1YJL172W LTV1P34078 463 aa5.66□□□□□ -1.5
CPS1YJL172W YKR075CP36155 307 aa5.66□□□□□ -1.5
CPS1YJL172W GYP7P48365 746 aa5.66□□□□□ -1.5
CPS1YJL172W TAN1P53072 289 aaPredicted RBP5.66□□□□□ -1.5
CPS1YJL172W MSB4Q12317 492 aa5.66□□□□□ -1.5
CPS1YJL172W NUP145P49687 1317 aa5.66□□□□□ -1.5
CPS1YJL172W URB1P34241 1764 aaKnown RBP5.66□□□□□ -1.5
CPS1YJL172W SAP190P36123 1033 aa5.65□□□□□ -1.5
CPS1YJL172W SIC1P38634 284 aa5.65□□□□□ -1.5
CPS1YJL172W SLN1P39928 1220 aaPredicted RBP5.65□□□□□ -1.5
CPS1YJL172W LEM3P42838 414 aa5.65□□□□□ -1.5
CPS1YJL172W SAP155P43612 1002 aa5.65□□□□□ -1.5
CPS1YJL172W MAM3Q12296 706 aa5.65□□□□□ -1.5
CPS1YJL172W NOP58Q12499 511 aaKnown RBP5.65□□□□□ -1.5
CPS1YJL172W SEC20P28791 383 aa5.65□□□□□ -1.51
CPS1YJL172W GLC3P32775 704 aa5.65□□□□□ -1.51
CPS1YJL172W UBP14P38237 781 aaKnown RBP5.65□□□□□ -1.51
CPS1YJL172W NAB3P38996 802 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
CPS1YJL172W GTT3P39996 337 aa5.65□□□□□ -1.51
CPS1YJL172W RRT14P40470 206 aa5.65□□□□□ -1.51
CPS1YJL172W FAR11P53917 953 aa5.65□□□□□ -1.51
CPS1YJL172W RTT109Q07794 436 aa5.65□□□□□ -1.51
CPS1YJL172W CFT2Q12102 859 aaPredicted RBP5.65□□□□□ -1.51
CPS1YJL172W YIL177CP40434 1758 aa5.64□□□□□ -1.51
CPS1YJL172W YJL225CP40889 1758 aa5.64□□□□□ -1.51
CPS1YJL172W UGA2P38067 497 aa5.64□□□□□ -1.51
CPS1YJL172W NPR2P39923 615 aa5.64□□□□□ -1.51
CPS1YJL172W ALD2P47771 506 aa5.64□□□□□ -1.51
CPS1YJL172W YNR021WP53723 404 aaKnown RBP5.64□□□□□ -1.51
CPS1YJL172W YDR090CQ03193 310 aa5.64□□□□□ -1.51
CPS1YJL172W RMT2Q03305 412 aa5.64□□□□□ -1.51
CPS1YJL172W PRP3Q03338 469 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms