RNA–Protein interactions for RNA: YJL141C

YAK1, Transcript of Serine-threonine protein kinase, yeast

Gene YAK1, Length 2,424 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAK1	YJL141C	TUM1	Q08686	304 aa	Known RBP	4.06	□□□□□ -1.76
YAK1	YJL141C	PLP2	Q12017	286 aa		4.06	□□□□□ -1.76
YAK1	YJL141C	GEF1	P37020	779 aa		4.05	□□□□□ -1.76
YAK1	YJL141C	ORC6	P38826	435 aa		4.05	□□□□□ -1.76
YAK1	YJL141C	NUP42	P49686	430 aa	Known RBP	4.05	□□□□□ -1.76
YAK1	YJL141C	RIX1	P38883	763 aa	Predicted RBP	4.05	□□□□□ -1.76
YAK1	YJL141C	THI12	P42883	340 aa		4.05	□□□□□ -1.76
YAK1	YJL141C	THI5	P43534	340 aa		4.05	□□□□□ -1.76
YAK1	YJL141C	THI11	P47183	340 aa		4.05	□□□□□ -1.76
YAK1	YJL141C	THI13	Q07748	340 aa		4.05	□□□□□ -1.76
YAK1	YJL141C	RPS0A	P32905	252 aa	Known RBP	4.04	□□□□□ -1.76
YAK1	YJL141C	SEC3	P33332	1336 aa	Known RBP	4.04	□□□□□ -1.76
YAK1	YJL141C	CLC1	P17891	233 aa		4.04	□□□□□ -1.76
YAK1	YJL141C	TFB3	Q03290	321 aa		4.04	□□□□□ -1.76
YAK1	YJL141C	SSA1	P10591	642 aa	Known RBP	4.03	□□□□□ -1.76
YAK1	YJL141C	BRE2	P43132	505 aa		4.03	□□□□□ -1.76
YAK1	YJL141C	ATG36	P46983	293 aa		4.03	□□□□□ -1.76
YAK1	YJL141C	GRX3	Q03835	250 aa		4.03	□□□□□ -1.76
YAK1	YJL141C	TFB4	Q12004	338 aa		4.03	□□□□□ -1.76
YAK1	YJL141C	CSC1	Q06538	782 aa		4.03	□□□□□ -1.76
YAK1	YJL141C	RPP1B	P10622	106 aa	Known RBP	4.02	□□□□□ -1.77
YAK1	YJL141C	TOA1	P32773	286 aa		4.02	□□□□□ -1.77
YAK1	YJL141C	BCK1	Q01389	1478 aa		4.02	□□□□□ -1.77
YAK1	YJL141C	ERG12	P07277	443 aa		4.02	□□□□□ -1.77
YAK1	YJL141C	PAM1	P37304	830 aa	Known RBP	4.02	□□□□□ -1.77
YAK1	YJL141C	NMD2	P38798	1089 aa	Known RBP	4.02	□□□□□ -1.77
YAK1	YJL141C	YNL011C	P53980	444 aa		4.02	□□□□□ -1.77
YAK1	YJL141C	SUB1	P54000	292 aa	Known RBP	4.02	□□□□□ -1.77
YAK1	YJL141C	HIF1	Q12373	385 aa		4.02	□□□□□ -1.77
YAK1	YJL141C	SPC110	P32380	944 aa		4.01	□□□□□ -1.77
YAK1	YJL141C	MVP1	P40959	511 aa	Known RBP	4.01	□□□□□ -1.77
YAK1	YJL141C	AIM7	Q12156	149 aa		4.01	□□□□□ -1.77
YAK1	YJL141C	IES2	P40154	320 aa		4.01	□□□□□ -1.77
YAK1	YJL141C	BDP1	P46678	594 aa		4.01	□□□□□ -1.77
YAK1	YJL141C	SSA2	P10592	639 aa	Known RBP	4	□□□□□ -1.77
YAK1	YJL141C	PEX21	P50091	288 aa		4	□□□□□ -1.77
YAK1	YJL141C	GIN4	Q12263	1142 aa		4	□□□□□ -1.77
YAK1	YJL141C	ATG32	P40458	529 aa		4	□□□□□ -1.77
YAK1	YJL141C	PIL1	P53252	339 aa	Known RBP	4	□□□□□ -1.77
YAK1	YJL141C	YMR074C	Q04773	145 aa		4	□□□□□ -1.77
YAK1	YJL141C	IPL1	P38991	367 aa		3.99	□□□□□ -1.77
YAK1	YJL141C	DOS2	P54858	310 aa		3.99	□□□□□ -1.77
YAK1	YJL141C	GEA1	P47102	1408 aa	Predicted RBP	3.98	□□□□□ -1.77
YAK1	YJL141C	GAR1	P28007	205 aa	Known RBP	3.98	□□□□□ -1.77
YAK1	YJL141C	GCD11	P32481	527 aa	Known RBP	3.98	□□□□□ -1.77
YAK1	YJL141C	SWE1	P32944	819 aa		3.98	□□□□□ -1.77
YAK1	YJL141C	KIC1	P38692	1080 aa		3.98	□□□□□ -1.77
YAK1	YJL141C	BIM1	P40013	344 aa		3.98	□□□□□ -1.77
YAK1	YJL141C	REF2	P42073	533 aa	Predicted RBP	3.98	□□□□□ -1.77
YAK1	YJL141C	FRK1	Q03002	865 aa	Predicted RBP	3.98	□□□□□ -1.77
YAK1	YJL141C	NHA1	Q99271	985 aa		3.98	□□□□□ -1.77
YAK1	YJL141C	RGR1	P19263	1082 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	MET22	P32179	357 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	TLG1	Q03322	224 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	RRN6	P32786	894 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	RRN7	P40992	514 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	NNF2	P53253	936 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	SEN54	Q02825	467 aa	Predicted RBP	3.97	□□□□□ -1.77
YAK1	YJL141C	YSH1	Q06224	779 aa	Predicted RBP	3.97	□□□□□ -1.77
YAK1	YJL141C	ERF2	Q06551	359 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	ETT1	Q08421	412 aa	Known RBP	3.97	□□□□□ -1.77
YAK1	YJL141C	NOB1	Q08444	459 aa	Known RBP	3.97	□□□□□ -1.77
YAK1	YJL141C	YRF1-2	P40105	1681 aa		3.97	□□□□□ -1.77
YAK1	YJL141C	CDC4	P07834	779 aa		3.96	□□□□□ -1.77
YAK1	YJL141C	COX6	P00427	148 aa		3.96	□□□□□ -1.78
YAK1	YJL141C	SPT16	P32558	1035 aa	Known RBP	3.96	□□□□□ -1.78
YAK1	YJL141C	VPS4	P52917	437 aa		3.95	□□□□□ -1.78
YAK1	YJL141C	HPC2	Q01448	625 aa		3.95	□□□□□ -1.78
YAK1	YJL141C	YDL176W	Q12027	708 aa		3.95	□□□□□ -1.78
YAK1	YJL141C	MOD5	P07884	428 aa		3.95	□□□□□ -1.78
YAK1	YJL141C	CPS1	P27614	576 aa		3.95	□□□□□ -1.78
YAK1	YJL141C	NPL4	P33755	580 aa		3.95	□□□□□ -1.78
YAK1	YJL141C	GCR2	Q01722	534 aa		3.95	□□□□□ -1.78
YAK1	YJL141C	MSH4	P40965	878 aa	Predicted RBP	3.94	□□□□□ -1.78
YAK1	YJL141C	YJL007C	P47080	104 aa		3.94	□□□□□ -1.78
YAK1	YJL141C	EAF7	P53911	425 aa	Known RBP	3.94	□□□□□ -1.78
YAK1	YJL141C	IME2	P32581	645 aa		3.94	□□□□□ -1.78
YAK1	YJL141C	SPC42	P36094	363 aa		3.94	□□□□□ -1.78
YAK1	YJL141C	NOP7	P53261	605 aa	Known RBP	3.94	□□□□□ -1.78
YAK1	YJL141C	HED1	Q03937	162 aa		3.94	□□□□□ -1.78
YAK1	YJL141C	AGE1	Q04412	482 aa		3.94	□□□□□ -1.78
YAK1	YJL141C	ENV9	Q08651	330 aa		3.94	□□□□□ -1.78
YAK1	YJL141C	CFT1	Q06632	1357 aa	Known RBP	3.93	□□□□□ -1.78
YAK1	YJL141C	SRB8	P25648	1427 aa		3.93	□□□□□ -1.78
YAK1	YJL141C	PDR11	P40550	1411 aa		3.93	□□□□□ -1.78
YAK1	YJL141C	YML083C	Q04526	418 aa		3.93	□□□□□ -1.78
YAK1	YJL141C	YPR109W	Q06104	294 aa		3.93	□□□□□ -1.78
YAK1	YJL141C	MET32	Q12041	191 aa		3.93	□□□□□ -1.78
YAK1	YJL141C	KEX2	P13134	814 aa		3.93	□□□□□ -1.78
YAK1	YJL141C	PAC1	P39946	494 aa	Known RBP	3.93	□□□□□ -1.78
YAK1	YJL141C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
YAK1	YJL141C	PDR5	P33302	1511 aa	Known RBP	3.92	□□□□□ -1.78
YAK1	YJL141C	EDE1	P34216	1381 aa		3.92	□□□□□ -1.78
YAK1	YJL141C	MSH3	P25336	1018 aa		3.92	□□□□□ -1.78
YAK1	YJL141C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
YAK1	YJL141C	FAR11	P53917	953 aa		3.92	□□□□□ -1.78
YAK1	YJL141C	TIF1	P10081	395 aa	Known RBP	3.91	□□□□□ -1.78
YAK1	YJL141C	KTR1	P27810	393 aa	Known RBP	3.91	□□□□□ -1.78
YAK1	YJL141C	LTV1	P34078	463 aa		3.91	□□□□□ -1.78
YAK1	YJL141C	OCA5	P38738	679 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms