RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W HGH1P48362 394 aaKnown RBP8.52□□□□□ -1.05
PRE3YJL001W TOS1P38288 455 aa8.51□□□□□ -1.05
PRE3YJL001W YDL129WQ07555 291 aa8.5□□□□□ -1.05
PRE3YJL001W RLF2Q12495 606 aa8.5□□□□□ -1.05
PRE3YJL001W DPS1P04802 557 aaKnown RBP8.49□□□□□ -1.05
PRE3YJL001W RAD54P32863 898 aa8.49□□□□□ -1.05
PRE3YJL001W SOL3P38858 249 aa8.49□□□□□ -1.05
PRE3YJL001W BUG1Q12191 341 aa8.49□□□□□ -1.05
PRE3YJL001W KEX1P09620 729 aa8.48□□□□□ -1.05
PRE3YJL001W SAP30P38429 201 aa8.48□□□□□ -1.05
PRE3YJL001W RAD4P14736 754 aa8.47□□□□□ -1.05
PRE3YJL001W GUA1P38625 525 aaKnown RBP8.47□□□□□ -1.05
PRE3YJL001W MHP1P43638 1398 aa8.47□□□□□ -1.05
PRE3YJL001W PCS60P38137 543 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
PRE3YJL001W SAP155P43612 1002 aa8.46□□□□□ -1.06
PRE3YJL001W UTP22P53254 1237 aaPredicted RBP8.46□□□□□ -1.06
PRE3YJL001W GAS4Q08271 471 aa8.46□□□□□ -1.06
PRE3YJL001W MSN5P52918 1224 aa8.45□□□□□ -1.06
PRE3YJL001W MLP1Q02455 1875 aaKnown RBP8.45□□□□□ -1.06
PRE3YJL001W PSE1P32337 1089 aaKnown RBP8.44□□□□□ -1.06
PRE3YJL001W ATG13Q06628 738 aa8.44□□□□□ -1.06
PRE3YJL001W CTT1P06115 562 aa8.43□□□□□ -1.06
PRE3YJL001W SSA4P22202 642 aaKnown RBP8.43□□□□□ -1.06
PRE3YJL001W AUS1Q08409 1394 aa8.43□□□□□ -1.06
PRE3YJL001W YER156CP40093 338 aaKnown RBP8.42□□□□□ -1.06
PRE3YJL001W KIN4Q01919 800 aa8.42□□□□□ -1.06
PRE3YJL001W PDI1P17967 522 aaKnown RBP8.41□□□□□ -1.06
PRE3YJL001W GRX1P25373 110 aaKnown RBP8.41□□□□□ -1.06
PRE3YJL001W HPC2Q01448 625 aa8.41□□□□□ -1.06
PRE3YJL001W INP54Q08227 384 aaKnown RBP8.41□□□□□ -1.06
PRE3YJL001W SEC3P33332 1336 aaKnown RBP8.4□□□□□ -1.06
PRE3YJL001W CHL1P22516 861 aaPredicted RBP8.4□□□□□ -1.06
PRE3YJL001W ERT1P38140 529 aa8.4□□□□□ -1.06
PRE3YJL001W RTF1P53064 558 aa8.4□□□□□ -1.06
PRE3YJL001W SQS1P53866 767 aaKnown RBP8.4□□□□□ -1.06
PRE3YJL001W NST1P53935 1240 aa8.4□□□□□ -1.06
PRE3YJL001W ORC1P54784 914 aaPredicted RBP8.4□□□□□ -1.06
PRE3YJL001W RIX7Q07844 837 aaKnown RBP8.4□□□□□ -1.06
PRE3YJL001W OSM1P21375 501 aaKnown RBP8.39□□□□□ -1.07
PRE3YJL001W YKL222CP35995 705 aa8.38□□□□□ -1.07
PRE3YJL001W PRE3P38624 215 aa8.38□□□□□ -1.07
PRE3YJL001W PUS5Q06244 254 aa8.38□□□□□ -1.07
PRE3YJL001W AI4P03878 556 aa8.37□□□□□ -1.07
PRE3YJL001W MPH3P0CE00 602 aa8.37□□□□□ -1.07
PRE3YJL001W PEX21P50091 288 aa8.37□□□□□ -1.07
PRE3YJL001W SCT1P32784 759 aa8.36□□□□□ -1.07
PRE3YJL001W ORC6P38826 435 aa8.36□□□□□ -1.07
PRE3YJL001W CWH41P53008 833 aa8.36□□□□□ -1.07
PRE3YJL001W GRX4P32642 244 aa8.35□□□□□ -1.07
PRE3YJL001W PML39Q03760 334 aa8.35□□□□□ -1.07
PRE3YJL001W TAP42Q04372 366 aa8.35□□□□□ -1.07
PRE3YJL001W ILV3P39522 585 aaKnown RBP8.34□□□□□ -1.07
PRE3YJL001W TFB3Q03290 321 aa8.34□□□□□ -1.07
PRE3YJL001W TUM1Q08686 304 aaKnown RBP8.34□□□□□ -1.07
PRE3YJL001W UTP10P42945 1769 aaKnown RBP8.34□□□□□ -1.07
PRE3YJL001W RRT14P40470 206 aa8.33□□□□□ -1.08
PRE3YJL001W TEA1P47988 759 aa8.33□□□□□ -1.08
PRE3YJL001W YBP2P53169 641 aa8.33□□□□□ -1.08
PRE3YJL001W HIM1Q06674 414 aa8.33□□□□□ -1.08
PRE3YJL001W BRL1P38770 471 aa8.32□□□□□ -1.08
PRE3YJL001W CSN12P47130 423 aa8.32□□□□□ -1.08
PRE3YJL001W FPK1P53739 893 aa8.32□□□□□ -1.08
PRE3YJL001W NUP145P49687 1317 aa8.31□□□□□ -1.08
PRE3YJL001W BCK2P33306 851 aa8.31□□□□□ -1.08
PRE3YJL001W NYV1Q12255 253 aa8.31□□□□□ -1.08
PRE3YJL001W RGR1P19263 1082 aa8.29□□□□□ -1.08
PRE3YJL001W RPP1BP10622 106 aaKnown RBP8.28□□□□□ -1.08
PRE3YJL001W SLI15P38283 698 aa8.28□□□□□ -1.08
PRE3YJL001W CTI6Q08923 506 aa8.28□□□□□ -1.08
PRE3YJL001W CLB5P30283 435 aa8.27□□□□□ -1.09
PRE3YJL001W SMY1P32364 656 aaKnown RBP8.27□□□□□ -1.09
PRE3YJL001W PFF1P38244 976 aa8.27□□□□□ -1.09
PRE3YJL001W MVP1P40959 511 aaKnown RBP8.27□□□□□ -1.09
PRE3YJL001W PMD1P32634 1753 aa8.26□□□□□ -1.09
PRE3YJL001W HSP104P31539 908 aaKnown RBP8.25□□□□□ -1.09
PRE3YJL001W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
PRE3YJL001W DSD1P53095 428 aa8.25□□□□□ -1.09
PRE3YJL001W ELP4Q02884 456 aaKnown RBP8.25□□□□□ -1.09
PRE3YJL001W CSC1Q06538 782 aa8.25□□□□□ -1.09
PRE3YJL001W GAP1P19145 602 aaPredicted RBP8.24□□□□□ -1.09
PRE3YJL001W PKC1P24583 1151 aa8.24□□□□□ -1.09
PRE3YJL001W MID1P41821 548 aa8.24□□□□□ -1.09
PRE3YJL001W ARH1P48360 493 aa8.24□□□□□ -1.09
PRE3YJL001W CTF4Q01454 927 aa8.24□□□□□ -1.09
PRE3YJL001W BUD27P43573 796 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
PRE3YJL001W YDR344CQ05510 147 aa8.23□□□□□ -1.09
PRE3YJL001W TOP1P04786 769 aa8.22□□□□□ -1.09
PRE3YJL001W THS1P04801 734 aaKnown RBP8.22□□□□□ -1.09
PRE3YJL001W RET1P22276 1149 aaKnown RBP8.22□□□□□ -1.09
PRE3YJL001W DUS1P53759 423 aaKnown RBP8.22□□□□□ -1.09
PRE3YJL001W RMT2Q03305 412 aa8.22□□□□□ -1.09
PRE3YJL001W YPR109WQ06104 294 aa8.22□□□□□ -1.09
PRE3YJL001W ATG20Q07528 640 aa8.22□□□□□ -1.09
PRE3YJL001W YLR278CQ05854 1341 aa8.22□□□□□ -1.09
PRE3YJL001W FIG2P25653 1609 aa8.21□□□□□ -1.09
PRE3YJL001W FAS2P19097 1887 aaKnown RBP8.21□□□□□ -1.09
PRE3YJL001W RPS9BP05755 195 aaKnown RBP8.21□□□□□ -1.1
PRE3YJL001W LPD1P09624 499 aaKnown RBP8.21□□□□□ -1.1
PRE3YJL001W KTR1P27810 393 aaKnown RBP8.21□□□□□ -1.1
PRE3YJL001W ETP1P38748 585 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms