RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCK1	YHR135C	VPS27	P40343	622 aa	Known RBP	7.82	□□□□□ -1.16
YCK1	YHR135C	PRP43	P53131	767 aa	Known RBP	7.82	□□□□□ -1.16
YCK1	YHR135C	PAP2	P53632	584 aa	Known RBP	7.82	□□□□□ -1.16
YCK1	YHR135C	YRR1	Q12172	810 aa		7.82	□□□□□ -1.16
YCK1	YHR135C	APC1	P53886	1748 aa		7.82	□□□□□ -1.16
YCK1	YHR135C	DPS1	P04802	557 aa	Known RBP	7.81	□□□□□ -1.16
YCK1	YHR135C	RPP0	P05317	312 aa	Known RBP	7.81	□□□□□ -1.16
YCK1	YHR135C	IOC4	Q04213	475 aa		7.81	□□□□□ -1.16
YCK1	YHR135C	CDC45	Q08032	650 aa		7.81	□□□□□ -1.16
YCK1	YHR135C	RVB2	Q12464	471 aa	Known RBP	7.81	□□□□□ -1.16
YCK1	YHR135C	SUI2	P20459	304 aa	Known RBP	7.81	□□□□□ -1.16
YCK1	YHR135C	RAM1	P22007	431 aa		7.81	□□□□□ -1.16
YCK1	YHR135C	GRX4	P32642	244 aa		7.81	□□□□□ -1.16
YCK1	YHR135C	TUM1	Q08686	304 aa	Known RBP	7.81	□□□□□ -1.16
YCK1	YHR135C	MVP1	P40959	511 aa	Known RBP	7.8	□□□□□ -1.16
YCK1	YHR135C	PDR1	P12383	1068 aa		7.79	□□□□□ -1.16
YCK1	YHR135C	PSE1	P32337	1089 aa	Known RBP	7.79	□□□□□ -1.16
YCK1	YHR135C	RPO41	P13433	1351 aa	Known RBP	7.78	□□□□□ -1.16
YCK1	YHR135C	THI22	Q06490	572 aa		7.78	□□□□□ -1.16
YCK1	YHR135C	GYP1	Q08484	637 aa		7.78	□□□□□ -1.16
YCK1	YHR135C	RGR1	P19263	1082 aa		7.77	□□□□□ -1.17
YCK1	YHR135C	PRD1	P25375	712 aa		7.77	□□□□□ -1.17
YCK1	YHR135C	NPL4	P33755	580 aa		7.77	□□□□□ -1.17
YCK1	YHR135C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.77	□□□□□ -1.17	not detected
YCK1	YHR135C	SAP155	P43612	1002 aa		7.77	□□□□□ -1.17
YCK1	YHR135C	SAS4	Q04003	481 aa		7.77	□□□□□ -1.17
YCK1	YHR135C	IES2	P40154	320 aa		7.76	□□□□□ -1.17
YCK1	YHR135C	YPR015C	Q12531	247 aa		7.76	□□□□□ -1.17
YCK1	YHR135C	TPD3	P31383	635 aa		7.75	□□□□□ -1.17
YCK1	YHR135C	YPR109W	Q06104	294 aa		7.75	□□□□□ -1.17
YCK1	YHR135C	YRF1-4	O13559	1382 aa		7.74	□□□□□ -1.17
YCK1	YHR135C	PRP45	P28004	379 aa	Predicted RBP	7.74	□□□□□ -1.17
YCK1	YHR135C	CLB5	P30283	435 aa		7.74	□□□□□ -1.17
YCK1	YHR135C	HEF3	P53978	1044 aa	Known RBP	7.74	□□□□□ -1.17
YCK1	YHR135C	RTT109	Q07794	436 aa		7.74	□□□□□ -1.17
YCK1	YHR135C	PRP5	P21372	849 aa	Predicted RBP	7.73	□□□□□ -1.17
YCK1	YHR135C	NUD1	P32336	851 aa		7.73	□□□□□ -1.17
YCK1	YHR135C	MSB3	P48566	633 aa	Predicted RBP	7.73	□□□□□ -1.17
YCK1	YHR135C	AKL1	P38080	1108 aa	Known RBP	7.72	□□□□□ -1.17
YCK1	YHR135C	YRF1-3	P0CX14	1859 aa		7.72	□□□□□ -1.17
YCK1	YHR135C	YRF1-7	P0CX15	1859 aa		7.72	□□□□□ -1.17
YCK1	YHR135C	YRF1-6	P53819	1859 aa		7.72	□□□□□ -1.17
YCK1	YHR135C	NUP42	P49686	430 aa	Known RBP	7.7	□□□□□ -1.18
YCK1	YHR135C	PRT1	P06103	763 aa	Known RBP	7.7	□□□□□ -1.18
YCK1	YHR135C	SLM3	Q12093	417 aa		7.7	□□□□□ -1.18
YCK1	YHR135C	DSD1	P53095	428 aa		7.69	□□□□□ -1.18
YCK1	YHR135C	YRB30	P53107	440 aa	Predicted RBP	7.69	□□□□□ -1.18
YCK1	YHR135C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.69	□□□□□ -1.18	not detected
YCK1	YHR135C	MRF1	P30775	413 aa	Predicted RBP	7.68	□□□□□ -1.18
YCK1	YHR135C	BUD20	Q08004	166 aa	Predicted RBP	7.68	□□□□□ -1.18
YCK1	YHR135C	ISM1	P48526	1002 aa		7.67	□□□□□ -1.18
YCK1	YHR135C	DAL5	P15365	543 aa		7.67	□□□□□ -1.18
YCK1	YHR135C	HSP104	P31539	908 aa	Known RBP	7.67	□□□□□ -1.18
YCK1	YHR135C	STR2	P47164	639 aa		7.67	□□□□□ -1.18
YCK1	YHR135C	SIR4	P11978	1358 aa		7.66	□□□□□ -1.18
YCK1	YHR135C	GCD11	P32481	527 aa	Known RBP	7.66	□□□□□ -1.18
YCK1	YHR135C	NTH2	P35172	780 aa		7.66	□□□□□ -1.18
YCK1	YHR135C	YIL092W	P40497	633 aa		7.66	□□□□□ -1.18
YCK1	YHR135C	XKS1	P42826	600 aa		7.66	□□□□□ -1.18
YCK1	YHR135C	DIT2	P21595	489 aa		7.65	□□□□□ -1.18
YCK1	YHR135C	TEA1	P47988	759 aa		7.65	□□□□□ -1.18
YCK1	YHR135C	TCB1	Q12466	1186 aa		7.65	□□□□□ -1.18
YCK1	YHR135C	RSF2	P46974	1380 aa		7.64	□□□□□ -1.19
YCK1	YHR135C	RAD2	P07276	1031 aa		7.63	□□□□□ -1.19
YCK1	YHR135C	YBR287W	P38355	427 aa		7.63	□□□□□ -1.19
YCK1	YHR135C	RRT14	P40470	206 aa		7.63	□□□□□ -1.19
YCK1	YHR135C	YNL050C	P53952	270 aa		7.63	□□□□□ -1.19
YCK1	YHR135C	APP1	P53933	587 aa		7.63	□□□□□ -1.19
YCK1	YHR135C	ENT1	Q12518	454 aa		7.63	□□□□□ -1.19
YCK1	YHR135C	RIM15	P43565	1770 aa		7.63	□□□□□ -1.19
YCK1	YHR135C	PAT1	P25644	796 aa	Known RBP	7.62	□□□□□ -1.19
YCK1	YHR135C	FPR3	P38911	411 aa	Known RBP	7.61	□□□□□ -1.19
YCK1	YHR135C	GYP7	P48365	746 aa		7.61	□□□□□ -1.19
YCK1	YHR135C	AOS1	Q06624	347 aa		7.61	□□□□□ -1.19
YCK1	YHR135C	YEL077C	Q3E7X8	1277 aa		7.61	□□□□□ -1.19
YCK1	YHR135C	SPT16	P32558	1035 aa	Known RBP	7.6	□□□□□ -1.19
YCK1	YHR135C	ZDS1	P50111	915 aa	Known RBP	7.6	□□□□□ -1.19
YCK1	YHR135C	YNR021W	P53723	404 aa	Known RBP	7.6	□□□□□ -1.19
YCK1	YHR135C	NUP145	P49687	1317 aa		7.6	□□□□□ -1.19
YCK1	YHR135C	POL32	P47110	350 aa		7.6	□□□□□ -1.19
YCK1	YHR135C	ATF2	P53296	535 aa		7.6	□□□□□ -1.19
YCK1	YHR135C	SRT1	Q03175	343 aa		7.6	□□□□□ -1.19
YCK1	YHR135C	ENV9	Q08651	330 aa		7.6	□□□□□ -1.19
YCK1	YHR135C	ERG12	P07277	443 aa		7.59	□□□□□ -1.19
YCK1	YHR135C	AMS1	P22855	1083 aa		7.59	□□□□□ -1.19
YCK1	YHR135C	INP54	Q08227	384 aa	Known RBP	7.59	□□□□□ -1.19
YCK1	YHR135C	BMS1	Q08965	1183 aa	Known RBP	7.59	□□□□□ -1.19
YCK1	YHR135C	COQ4	O13525	335 aa		7.58	□□□□□ -1.2
YCK1	YHR135C	MAM1	P40065	302 aa		7.58	□□□□□ -1.2
YCK1	YHR135C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.58	□□□□□ -1.2	not detected
YCK1	YHR135C	ADE16	P54113	591 aa	Known RBP	7.57	□□□□□ -1.2
YCK1	YHR135C	CTF4	Q01454	927 aa		7.57	□□□□□ -1.2
YCK1	YHR135C	EDE1	P34216	1381 aa		7.57	□□□□□ -1.2
YCK1	YHR135C	RPC31	P17890	251 aa		7.56	□□□□□ -1.2
YCK1	YHR135C	PUF6	Q04373	656 aa	Known RBP	7.56	□□□□□ -1.2
YCK1	YHR135C	TY1A-DR4	O74302	440 aa		7.56	□□□□□ -1.2
YCK1	YHR135C	TY1A-H	P0C2I4	478 aa	Known RBP	7.56	□□□□□ -1.2
YCK1	YHR135C	TY1A-A	P0CX57	440 aa		7.56	□□□□□ -1.2
YCK1	YHR135C	TY1A-PR1	P0CX58	440 aa		7.56	□□□□□ -1.2
YCK1	YHR135C	TY1A-OR	P0CX59	440 aa		7.56	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms