RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSC84	YHR016C	YKR075C	P36155	307 aa		13.88	□□□□□ -0.19
YSC84	YHR016C	ATG13	Q06628	738 aa		13.88	□□□□□ -0.19
YSC84	YHR016C	ALE1	Q08548	619 aa		13.88	□□□□□ -0.19
YSC84	YHR016C	HST1	P53685	503 aa		13.87	□□□□□ -0.19
YSC84	YHR016C	DNM1	P54861	757 aa		13.87	□□□□□ -0.19
YSC84	YHR016C	LAM6	Q08001	693 aa		13.87	□□□□□ -0.19
YSC84	YHR016C	NUP133	P36161	1157 aa		13.86	□□□□□ -0.19
YSC84	YHR016C	CIR1	P42940	261 aa		13.86	□□□□□ -0.19
YSC84	YHR016C	SWI1	P09547	1314 aa		13.85	□□□□□ -0.19
YSC84	YHR016C	CST6	P40535	587 aa		13.85	□□□□□ -0.19
YSC84	YHR016C	TCB2	P48231	1178 aa		13.85	□□□□□ -0.19
YSC84	YHR016C	HRQ1	Q05549	1077 aa		13.85	□□□□□ -0.19
YSC84	YHR016C	BUD31	P25337	157 aa	Predicted RBP	13.84	□□□□□ -0.19
YSC84	YHR016C	YJR008W	P47085	338 aa		13.83	□□□□□ -0.2
YSC84	YHR016C	PIL1	P53252	339 aa	Known RBP	13.83	□□□□□ -0.2
YSC84	YHR016C	PRP40	P33203	583 aa	Known RBP	13.82	□□□□□ -0.2
YSC84	YHR016C	YJL181W	P46987	611 aa		13.82	□□□□□ -0.2
YSC84	YHR016C	RSC1	P53236	928 aa		13.82	□□□□□ -0.2
YSC84	YHR016C	LCD1	Q04377	747 aa		13.82	□□□□□ -0.2
YSC84	YHR016C	BIK1	P11709	440 aa		13.81	□□□□□ -0.2
YSC84	YHR016C	UBP1	P25037	809 aa		13.81	□□□□□ -0.2
YSC84	YHR016C	ECM21	P38167	1117 aa	Known RBP	13.81	□□□□□ -0.2
YSC84	YHR016C	RKM3	P38222	552 aa		13.81	□□□□□ -0.2
YSC84	YHR016C	HYR1	P40581	163 aa	Known RBP	13.81	□□□□□ -0.2
YSC84	YHR016C	YGL081W	P53156	320 aa		13.81	□□□□□ -0.2
YSC84	YHR016C	MNN4	P36044	1178 aa		13.81	□□□□□ -0.2
YSC84	YHR016C	NPR2	P39923	615 aa		13.81	□□□□□ -0.2
YSC84	YHR016C	CTR9	P89105	1077 aa		13.81	□□□□□ -0.2
YSC84	YHR016C	AAP1	P37898	856 aa	Known RBP	13.8	□□□□□ -0.2
YSC84	YHR016C	UBP12	P39538	1254 aa		13.8	□□□□□ -0.2
YSC84	YHR016C	YBP2	P53169	641 aa		13.8	□□□□□ -0.2
YSC84	YHR016C	NCB2	Q92317	146 aa		13.8	□□□□□ -0.2
YSC84	YHR016C	PDR18	P53756	1333 aa		13.79	□□□□□ -0.2
YSC84	YHR016C	KEX1	P09620	729 aa		13.79	□□□□□ -0.2
YSC84	YHR016C	RPN12	P32496	274 aa		13.79	□□□□□ -0.2
YSC84	YHR016C	RVS167	P39743	482 aa	Known RBP	13.79	□□□□□ -0.2
YSC84	YHR016C	KRE33	P53914	1056 aa	Known RBP	13.79	□□□□□ -0.2
YSC84	YHR016C	RIM20	Q12033	661 aa		13.79	□□□□□ -0.2
YSC84	YHR016C	RMD1	Q03441	430 aa		13.78	□□□□□ -0.2
YSC84	YHR016C	FPR4	Q06205	392 aa	Predicted RBP	13.78	□□□□□ -0.2
YSC84	YHR016C	AIM44	Q99299	758 aa		13.78	□□□□□ -0.2
YSC84	YHR016C	LPD1	P09624	499 aa	Known RBP	13.77	□□□□□ -0.21
YSC84	YHR016C	SSF1	P38789	453 aa	Predicted RBP	13.77	□□□□□ -0.21
YSC84	YHR016C	MRPS35	P53292	345 aa		13.76	□□□□□ -0.21
YSC84	YHR016C	BRE1	Q07457	700 aa	Known RBP	13.76	□□□□□ -0.21
YSC84	YHR016C	UTP10	P42945	1769 aa	Known RBP	13.75	□□□□□ -0.21
YSC84	YHR016C	GRX1	P25373	110 aa	Known RBP	13.75	□□□□□ -0.21
YSC84	YHR016C	AIM9	P40053	627 aa	Known RBP	13.75	□□□□□ -0.21
YSC84	YHR016C	RSM25	P40496	264 aa		13.74	□□□□□ -0.21
YSC84	YHR016C	SET1	P38827	1080 aa	Known RBP	13.73	□□□□□ -0.21
YSC84	YHR016C	MLC1	P53141	149 aa		13.73	□□□□□ -0.21
YSC84	YHR016C	RMT2	Q03305	412 aa		13.73	□□□□□ -0.21
YSC84	YHR016C	YGL242C	P53066	181 aa		13.73	□□□□□ -0.21
YSC84	YHR016C	VPS64	Q03944	604 aa		13.73	□□□□□ -0.21
YSC84	YHR016C	KTR3	P38130	404 aa	Predicted RBP	13.72	□□□□□ -0.21
YSC84	YHR016C	APC11	Q12157	165 aa		13.72	□□□□□ -0.21
YSC84	YHR016C	MSB4	Q12317	492 aa		13.72	□□□□□ -0.21
YSC84	YHR016C	RPL19A	P0CX82	189 aa	Known RBP	13.71	□□□□□ -0.22
YSC84	YHR016C	RPL19B	P0CX83	189 aa	Predicted RBP	13.71	□□□□□ -0.22
YSC84	YHR016C	PRI1	P10363	409 aa		13.71	□□□□□ -0.22
YSC84	YHR016C	KRI1	P42846	591 aa	Known RBP	13.71	□□□□□ -0.22
YSC84	YHR016C	LYS4	P49367	693 aa	Predicted RBP	13.71	□□□□□ -0.22
YSC84	YHR016C	MDG1	P53885	366 aa		13.71	□□□□□ -0.22
YSC84	YHR016C	ALO1	P54783	526 aa	Known RBP	13.71	□□□□□ -0.22
YSC84	YHR016C	TUM1	Q08686	304 aa	Known RBP	13.71	□□□□□ -0.22
YSC84	YHR016C	PEX19	Q07418	342 aa		13.7	□□□□□ -0.22
YSC84	YHR016C	MCM2	P29469	868 aa		13.68	□□□□□ -0.22
YSC84	YHR016C	CWH41	P53008	833 aa		13.68	□□□□□ -0.22
YSC84	YHR016C	NOP53	Q12080	455 aa	Known RBP	13.68	□□□□□ -0.22
YSC84	YHR016C	KTR1	P27810	393 aa	Known RBP	13.67	□□□□□ -0.22
YSC84	YHR016C	HXT10	P43581	546 aa		13.67	□□□□□ -0.22
YSC84	YHR016C	APL2	P36000	726 aa	Predicted RBP	13.66	□□□□□ -0.22
YSC84	YHR016C	DID4	P36108	232 aa		13.66	□□□□□ -0.22
YSC84	YHR016C	YPR204W	Q08995	1032 aa		13.66	□□□□□ -0.22
YSC84	YHR016C	ELM1	P32801	640 aa		13.65	□□□□□ -0.22
YSC84	YHR016C	MIC60	P36112	540 aa		13.65	□□□□□ -0.22
YSC84	YHR016C	SPO22	P40511	975 aa		13.65	□□□□□ -0.22
YSC84	YHR016C	YLR271W	Q06152	274 aa		13.65	□□□□□ -0.22
YSC84	YHR016C	SSP2	Q08646	371 aa		13.65	□□□□□ -0.22
YSC84	YHR016C	GRE2	Q12068	342 aa	Known RBP	13.65	□□□□□ -0.22
YSC84	YHR016C	PRX1	P34227	261 aa	Known RBP	13.64	□□□□□ -0.23
YSC84	YHR016C	PIB2	P53191	635 aa		13.64	□□□□□ -0.23
YSC84	YHR016C	MBR1	P23493	339 aa		13.64	□□□□□ -0.23
YSC84	YHR016C	TSR3	Q12094	313 aa	Known RBP	13.64	□□□□□ -0.23
YSC84	YHR016C	SLA1	P32790	1244 aa		13.63	□□□□□ -0.23
YSC84	YHR016C	CCT5	P40413	562 aa	Known RBP	13.63	□□□□□ -0.23
YSC84	YHR016C	CTH1	P47976	325 aa		13.63	□□□□□ -0.23
YSC84	YHR016C	CTF18	P49956	741 aa		13.63	□□□□□ -0.23
YSC84	YHR016C	PEX14	P53112	341 aa		13.63	□□□□□ -0.23
YSC84	YHR016C	ARG8	P18544	423 aa		13.62	□□□□□ -0.23
YSC84	YHR016C	YBL086C	P38177	466 aa		13.62	□□□□□ -0.23
YSC84	YHR016C	TTI1	P36097	1038 aa		13.61	□□□□□ -0.23
YSC84	YHR016C	STM1	P39015	273 aa	Known RBP	13.61	□□□□□ -0.23
YSC84	YHR016C	GTT3	P39996	337 aa		13.61	□□□□□ -0.23
YSC84	YHR016C	ALD2	P47771	506 aa		13.61	□□□□□ -0.23
YSC84	YHR016C	PSH1	Q12161	406 aa		13.61	□□□□□ -0.23
YSC84	YHR016C	PHM7	Q12252	991 aa		13.61	□□□□□ -0.23
YSC84	YHR016C	FRS2	P15625	503 aa	Known RBP	13.6	□□□□□ -0.23
YSC84	YHR016C	TPM1	P17536	199 aa	Known RBP	13.6	□□□□□ -0.23
YSC84	YHR016C	BDF1	P35817	686 aa		13.6	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms