RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C ALD2P47771 506 aa7.17□□□□□ -1.26
RPT6YGL048C AUS1Q08409 1394 aa7.17□□□□□ -1.26
RPT6YGL048C YIL177CP40434 1758 aa7.16□□□□□ -1.26
RPT6YGL048C YJL225CP40889 1758 aa7.16□□□□□ -1.26
RPT6YGL048C FKS3Q04952 1785 aa7.16□□□□□ -1.26
RPT6YGL048C PDI1P17967 522 aaKnown RBP7.16□□□□□ -1.26
RPT6YGL048C PRP40P33203 583 aaKnown RBP7.16□□□□□ -1.26
RPT6YGL048C NMA111P53920 997 aa7.16□□□□□ -1.26
RPT6YGL048C TAP42Q04372 366 aa7.16□□□□□ -1.26
RPT6YGL048C ISU2Q12056 156 aa7.16□□□□□ -1.26
RPT6YGL048C YRF1-4O13559 1382 aa7.16□□□□□ -1.26
RPT6YGL048C SIR4P11978 1358 aa7.16□□□□□ -1.26
RPT6YGL048C APC1P53886 1748 aa7.15□□□□□ -1.26
RPT6YGL048C ADE16P54113 591 aaKnown RBP7.15□□□□□ -1.26
RPT6YGL048C CSC1Q06538 782 aa7.15□□□□□ -1.26
RPT6YGL048C CDC73Q06697 393 aa7.15□□□□□ -1.26
RPT6YGL048C SPT23P35210 1082 aa7.14□□□□□ -1.27
RPT6YGL048C PEX21P50091 288 aa7.14□□□□□ -1.27
RPT6YGL048C RTF1P53064 558 aa7.14□□□□□ -1.27
RPT6YGL048C BNI4P53858 892 aa7.14□□□□□ -1.27
RPT6YGL048C FRK1Q03002 865 aaPredicted RBP7.14□□□□□ -1.27
RPT6YGL048C GRX4P32642 244 aa7.13□□□□□ -1.27
RPT6YGL048C ORC6P38826 435 aa7.13□□□□□ -1.27
RPT6YGL048C MEC3Q02574 474 aa7.13□□□□□ -1.27
RPT6YGL048C HIM1Q06674 414 aa7.13□□□□□ -1.27
RPT6YGL048C TFB4Q12004 338 aa7.13□□□□□ -1.27
RPT6YGL048C RPO41P13433 1351 aaKnown RBP7.12□□□□□ -1.27
RPT6YGL048C SEC3P33332 1336 aaKnown RBP7.12□□□□□ -1.27
RPT6YGL048C DMA2P53924 522 aa7.12□□□□□ -1.27
RPT6YGL048C PSE1P32337 1089 aaKnown RBP7.1□□□□□ -1.27
RPT6YGL048C PDS5Q04264 1277 aa7.1□□□□□ -1.27
RPT6YGL048C SSA1P10591 642 aaKnown RBP7.09□□□□□ -1.27
RPT6YGL048C GAP1P19145 602 aaPredicted RBP7.09□□□□□ -1.27
RPT6YGL048C SIS2P36024 562 aa7.09□□□□□ -1.27
RPT6YGL048C PTC2P39966 464 aaKnown RBP7.09□□□□□ -1.27
RPT6YGL048C INP54Q08227 384 aaKnown RBP7.09□□□□□ -1.27
RPT6YGL048C MHP1P43638 1398 aa7.08□□□□□ -1.28
RPT6YGL048C OSM1P21375 501 aaKnown RBP7.08□□□□□ -1.28
RPT6YGL048C YDR344CQ05510 147 aa7.08□□□□□ -1.28
RPT6YGL048C SPT7P35177 1332 aa7.07□□□□□ -1.28
RPT6YGL048C MVP1P40959 511 aaKnown RBP7.07□□□□□ -1.28
RPT6YGL048C NUP42P49686 430 aaKnown RBP7.07□□□□□ -1.28
RPT6YGL048C CLB5P30283 435 aa7.06□□□□□ -1.28
RPT6YGL048C BCK2P33306 851 aa7.06□□□□□ -1.28
RPT6YGL048C ATG13Q06628 738 aa7.06□□□□□ -1.28
RPT6YGL048C SNF2P22082 1703 aa7.06□□□□□ -1.28
RPT6YGL048C RGR1P19263 1082 aa7.05□□□□□ -1.28
RPT6YGL048C POL5P39985 1022 aaKnown RBP7.05□□□□□ -1.28
RPT6YGL048C ALD3P54114 506 aa7.05□□□□□ -1.28
RPT6YGL048C YML082WQ04533 649 aaKnown RBP7.05□□□□□ -1.28
RPT6YGL048C TUM1Q08686 304 aaKnown RBP7.05□□□□□ -1.28
RPT6YGL048C RAD4P14736 754 aa7.04□□□□□ -1.28
RPT6YGL048C TOS1P38288 455 aa7.04□□□□□ -1.28
RPT6YGL048C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
RPT6YGL048C DSD1P53095 428 aa7.04□□□□□ -1.28
RPT6YGL048C YNR021WP53723 404 aaKnown RBP7.04□□□□□ -1.28
RPT6YGL048C GRX1P25373 110 aaKnown RBP7.03□□□□□ -1.28
RPT6YGL048C NUP145P49687 1317 aa7.02□□□□□ -1.28
RPT6YGL048C TRK1P12685 1235 aa7.02□□□□□ -1.29
RPT6YGL048C KAR2P16474 682 aaKnown RBP7.02□□□□□ -1.29
RPT6YGL048C DIT2P21595 489 aa7.02□□□□□ -1.29
RPT6YGL048C CTF4Q01454 927 aa7.02□□□□□ -1.29
RPT6YGL048C YRR1Q12172 810 aa7.02□□□□□ -1.29
RPT6YGL048C MLP1Q02455 1875 aaKnown RBP7.02□□□□□ -1.29
RPT6YGL048C SNU71P53207 620 aaKnown RBP7.01□□□□□ -1.29
RPT6YGL048C UTP22P53254 1237 aaPredicted RBP7.01□□□□□ -1.29
RPT6YGL048C BUG1Q12191 341 aa7.01□□□□□ -1.29
RPT6YGL048C TOP1P04786 769 aa7□□□□□ -1.29
RPT6YGL048C HSP104P31539 908 aaKnown RBP7□□□□□ -1.29
RPT6YGL048C VRP1P37370 817 aa7□□□□□ -1.29
RPT6YGL048C YFR016CP43597 1233 aaKnown RBP7□□□□□ -1.29
RPT6YGL048C EAF6P47128 113 aa7□□□□□ -1.29
RPT6YGL048C YPR109WQ06104 294 aa7□□□□□ -1.29
RPT6YGL048C AKL1P38080 1108 aaKnown RBP6.99□□□□□ -1.29
RPT6YGL048C YBP2P53169 641 aa6.99□□□□□ -1.29
RPT6YGL048C ATF2P53296 535 aa6.99□□□□□ -1.29
RPT6YGL048C NPL4P33755 580 aa6.98□□□□□ -1.29
RPT6YGL048C TEA1P47988 759 aa6.98□□□□□ -1.29
RPT6YGL048C RLF2Q12495 606 aa6.98□□□□□ -1.29
RPT6YGL048C PDR1P12383 1068 aa6.97□□□□□ -1.29
RPT6YGL048C RRP46P53256 223 aaPredicted RBP6.97□□□□□ -1.29
RPT6YGL048C NYV1Q12255 253 aa6.97□□□□□ -1.29
RPT6YGL048C NUD1P32336 851 aa6.96□□□□□ -1.3
RPT6YGL048C NTH2P35172 780 aa6.96□□□□□ -1.3
RPT6YGL048C RPN1P38764 993 aaKnown RBP6.96□□□□□ -1.3
RPT6YGL048C SAP155P43612 1002 aa6.96□□□□□ -1.3
RPT6YGL048C PAP2P53632 584 aaKnown RBP6.96□□□□□ -1.3
RPT6YGL048C RIX7Q07844 837 aaKnown RBP6.96□□□□□ -1.3
RPT6YGL048C AIM7Q12156 149 aa6.96□□□□□ -1.3
RPT6YGL048C RAM1P22007 431 aa6.95□□□□□ -1.3
RPT6YGL048C ERT1P38140 529 aa6.95□□□□□ -1.3
RPT6YGL048C XDJ1P39102 459 aa6.95□□□□□ -1.3
RPT6YGL048C MSN5P52918 1224 aa6.94□□□□□ -1.3
RPT6YGL048C KIN4Q01919 800 aa6.94□□□□□ -1.3
RPT6YGL048C AOS1Q06624 347 aa6.94□□□□□ -1.3
RPT6YGL048C CTT1P06115 562 aa6.93□□□□□ -1.3
RPT6YGL048C GLC3P32775 704 aa6.93□□□□□ -1.3
RPT6YGL048C HPC2Q01448 625 aa6.93□□□□□ -1.3
RPT6YGL048C RIM15P43565 1770 aa6.92□□□□□ -1.3
RPT6YGL048C RMT2Q03305 412 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms