RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W SKN7P38889 622 aa3.56□□□□□ -1.84
BRP1YGL007W VTC4P47075 721 aa3.56□□□□□ -1.84
BRP1YGL007W SPB4P25808 606 aaPredicted RBP3.55□□□□□ -1.84
BRP1YGL007W RSC30P38781 883 aa3.55□□□□□ -1.84
BRP1YGL007W YMR187CQ03236 431 aa3.55□□□□□ -1.84
BRP1YGL007W GLT1Q12680 2145 aaKnown RBP3.55□□□□□ -1.84
BRP1YGL007W RKR1Q04781 1562 aa3.55□□□□□ -1.84
BRP1YGL007W STU1P38198 1513 aa3.54□□□□□ -1.84
BRP1YGL007W YOR1P53049 1477 aa3.54□□□□□ -1.84
BRP1YGL007W SPP41P38904 1435 aa3.54□□□□□ -1.84
BRP1YGL007W ADE12P80210 433 aaKnown RBP3.54□□□□□ -1.84
BRP1YGL007W TDA6Q06466 467 aa3.54□□□□□ -1.84
BRP1YGL007W TRM732Q03496 1420 aa3.53□□□□□ -1.84
BRP1YGL007W TY2B-BQ12491 1770 aa3.53□□□□□ -1.84
BRP1YGL007W RPA190P10964 1664 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W BNI1P41832 1953 aa3.53□□□□□ -1.84
BRP1YGL007W STE6P12866 1290 aa3.53□□□□□ -1.84
BRP1YGL007W DAL1P32375 460 aa3.53□□□□□ -1.84
BRP1YGL007W FBP26P32604 452 aa3.53□□□□□ -1.84
BRP1YGL007W SBE2P42223 864 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W FIG4P42837 879 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-HO13535 1793 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-DR5P0C2I2 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-DR6P0C2I3 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-LR2P0C2I5 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-LR3P0C2I6 1755 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W TY1B-PR1P0C2I9 1755 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W TY1B-PR2P0C2J0 1756 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-PR3P0C2J1 1755 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W TY1B-JR1P47098 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-ML2Q03434 1755 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W TY1B-ER1Q03612 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-ML1Q04711 1755 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W TY1B-GR2Q12269 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-OLQ12273 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TY1B-PLQ12414 1755 aaKnown RBP3.53□□□□□ -1.84
BRP1YGL007W TY1B-DR3Q99231 1755 aa3.53□□□□□ -1.84
BRP1YGL007W TSC11P40061 1430 aa3.53□□□□□ -1.85
BRP1YGL007W ATF2P53296 535 aa3.52□□□□□ -1.85
BRP1YGL007W YMR265CQ03508 461 aaKnown RBP3.52□□□□□ -1.85
BRP1YGL007W SYT1Q06836 1226 aa3.52□□□□□ -1.85
BRP1YGL007W NUP159P40477 1460 aa3.51□□□□□ -1.85
BRP1YGL007W ESC1Q03661 1658 aaKnown RBP3.5□□□□□ -1.85
BRP1YGL007W ARG8P18544 423 aa3.5□□□□□ -1.85
BRP1YGL007W DIT1P21623 536 aa3.5□□□□□ -1.85
BRP1YGL007W PKH3Q03306 898 aaPredicted RBP3.5□□□□□ -1.85
BRP1YGL007W GEA2P39993 1459 aaKnown RBP3.49□□□□□ -1.85
BRP1YGL007W UBP15P50101 1230 aa3.49□□□□□ -1.85
BRP1YGL007W YNR014WP53719 212 aa3.49□□□□□ -1.85
BRP1YGL007W KRE33P53914 1056 aaKnown RBP3.49□□□□□ -1.85
BRP1YGL007W SNT2P53127 1403 aa3.49□□□□□ -1.85
BRP1YGL007W YTA7P40340 1379 aa3.49□□□□□ -1.85
BRP1YGL007W TEC1P18412 486 aa3.48□□□□□ -1.85
BRP1YGL007W DLD3P39976 496 aaKnown RBP3.48□□□□□ -1.85
BRP1YGL007W ISU1Q03020 165 aa3.48□□□□□ -1.85
BRP1YGL007W VTH1P40438 1549 aa3.48□□□□□ -1.85
BRP1YGL007W VTH2P40890 1549 aa3.48□□□□□ -1.85
BRP1YGL007W MYO4P32492 1471 aa3.47□□□□□ -1.85
BRP1YGL007W MCX1P38323 520 aaPredicted RBP3.47□□□□□ -1.85
BRP1YGL007W SAS10Q12136 610 aaPredicted RBP3.47□□□□□ -1.85
BRP1YGL007W YDR461C-AQ2V2P7 80 aa3.47□□□□□ -1.85
BRP1YGL007W YRF1-1P0CX20 1796 aa3.47□□□□□ -1.85
BRP1YGL007W YRF1-5P0CX21 1796 aa3.47□□□□□ -1.85
BRP1YGL007W YRF1-8P0CX22 1796 aa3.47□□□□□ -1.85
BRP1YGL007W DRS2P39524 1355 aa3.47□□□□□ -1.85
BRP1YGL007W VPS15P22219 1454 aa3.47□□□□□ -1.85
BRP1YGL007W MMS1Q06211 1407 aa3.46□□□□□ -1.86
BRP1YGL007W TY1B-JR2P47100 1755 aaKnown RBP3.46□□□□□ -1.86
BRP1YGL007W TY1B-ER2Q03619 1755 aa3.46□□□□□ -1.86
BRP1YGL007W TY1B-MR1Q04214 1755 aa3.46□□□□□ -1.86
BRP1YGL007W TY1B-MR2Q04670 1755 aaKnown RBP3.46□□□□□ -1.86
BRP1YGL007W TY1B-LR1Q12088 1755 aaKnown RBP3.46□□□□□ -1.86
BRP1YGL007W TY1B-NL1Q12112 1755 aa3.46□□□□□ -1.86
BRP1YGL007W TY1B-GR1Q12141 1755 aa3.46□□□□□ -1.86
BRP1YGL007W TY1B-BLQ12490 1755 aa3.46□□□□□ -1.86
BRP1YGL007W YCK2P23292 546 aaKnown RBP3.46□□□□□ -1.86
BRP1YGL007W KTR1P27810 393 aaKnown RBP3.46□□□□□ -1.86
BRP1YGL007W MET10P39692 1035 aa3.46□□□□□ -1.86
BRP1YGL007W RPP2BP02400 110 aaKnown RBP3.45□□□□□ -1.86
BRP1YGL007W AMN1P38285 549 aaPredicted RBP3.45□□□□□ -1.86
BRP1YGL007W YPR084WQ06821 456 aa3.45□□□□□ -1.86
BRP1YGL007W ATG20Q07528 640 aa3.45□□□□□ -1.86
BRP1YGL007W STH1P32597 1359 aa3.45□□□□□ -1.86
BRP1YGL007W SNQ2P32568 1501 aaKnown RBP3.44□□□□□ -1.86
BRP1YGL007W SLA1P32790 1244 aa3.44□□□□□ -1.86
BRP1YGL007W BOI2P39969 1040 aa3.44□□□□□ -1.86
BRP1YGL007W MSN5P52918 1224 aa3.44□□□□□ -1.86
BRP1YGL007W SSN3P39073 555 aa3.43□□□□□ -1.86
BRP1YGL007W SLN1P39928 1220 aaPredicted RBP3.43□□□□□ -1.86
BRP1YGL007W LSB6P42951 607 aa3.43□□□□□ -1.86
BRP1YGL007W MCA1Q08601 432 aa3.43□□□□□ -1.86
BRP1YGL007W YDR215CQ12240 137 aa3.43□□□□□ -1.86
BRP1YGL007W GPM1P00950 247 aaKnown RBP3.42□□□□□ -1.86
BRP1YGL007W LEU3P08638 886 aa3.42□□□□□ -1.86
BRP1YGL007W GUT2P32191 649 aa3.42□□□□□ -1.86
BRP1YGL007W MAC1P35192 417 aa3.42□□□□□ -1.86
BRP1YGL007W DMA2P53924 522 aa3.42□□□□□ -1.86
BRP1YGL007W TY1A-DR3Q12441 440 aa3.42□□□□□ -1.86
BRP1YGL007W RPO21P04050 1733 aaKnown RBP3.41□□□□□ -1.86
BRP1YGL007W PDR12Q02785 1511 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms