RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C SSF1P38789 453 aaPredicted RBP12.55□□□□□ -0.4
CCA1YER168C SET1P38827 1080 aaKnown RBP12.55□□□□□ -0.4
CCA1YER168C BDH2P39713 417 aa12.55□□□□□ -0.4
CCA1YER168C RIM20Q12033 661 aa12.55□□□□□ -0.4
CCA1YER168C NOP53Q12080 455 aaKnown RBP12.55□□□□□ -0.4
CCA1YER168C AAP1P37898 856 aaKnown RBP12.54□□□□□ -0.4
CCA1YER168C ENV9Q08651 330 aa12.54□□□□□ -0.4
CCA1YER168C MRPS35P53292 345 aa12.53□□□□□ -0.4
CCA1YER168C COG8Q04632 607 aa12.53□□□□□ -0.4
CCA1YER168C YPR204WQ08995 1032 aa12.53□□□□□ -0.4
CCA1YER168C KTR3P38130 404 aaPredicted RBP12.52□□□□□ -0.4
CCA1YER168C HXT10P43581 546 aa12.52□□□□□ -0.4
CCA1YER168C YGL081WP53156 320 aa12.52□□□□□ -0.4
CCA1YER168C HRQ1Q05549 1077 aa12.52□□□□□ -0.4
CCA1YER168C FPR4Q06205 392 aaPredicted RBP12.52□□□□□ -0.4
CCA1YER168C HST1P53685 503 aa12.51□□□□□ -0.41
CCA1YER168C BRE1Q07457 700 aaKnown RBP12.51□□□□□ -0.41
CCA1YER168C SSP2Q08646 371 aa12.51□□□□□ -0.41
CCA1YER168C TUM1Q08686 304 aaKnown RBP12.51□□□□□ -0.41
CCA1YER168C YGL242CP53066 181 aa12.51□□□□□ -0.41
CCA1YER168C MLC1P53141 149 aa12.51□□□□□ -0.41
CCA1YER168C ALO1P54783 526 aaKnown RBP12.51□□□□□ -0.41
CCA1YER168C BIK1P11709 440 aa12.5□□□□□ -0.41
CCA1YER168C CIR1P42940 261 aa12.5□□□□□ -0.41
CCA1YER168C YLR271WQ06152 274 aa12.5□□□□□ -0.41
CCA1YER168C ARG8P18544 423 aa12.49□□□□□ -0.41
CCA1YER168C SLA1P32790 1244 aa12.48□□□□□ -0.41
CCA1YER168C AIM9P40053 627 aaKnown RBP12.48□□□□□ -0.41
CCA1YER168C APP1P53933 587 aa12.48□□□□□ -0.41
CCA1YER168C FAP1P53971 965 aa12.48□□□□□ -0.41
CCA1YER168C HYR1P40581 163 aaKnown RBP12.46□□□□□ -0.41
CCA1YER168C KRI1P42846 591 aaKnown RBP12.46□□□□□ -0.41
CCA1YER168C FCP1Q03254 732 aa12.46□□□□□ -0.41
CCA1YER168C PSH1Q12161 406 aa12.46□□□□□ -0.41
CCA1YER168C DCD1P06773 312 aa12.45□□□□□ -0.42
CCA1YER168C RVS167P39743 482 aaKnown RBP12.45□□□□□ -0.42
CCA1YER168C RSC1P53236 928 aa12.45□□□□□ -0.42
CCA1YER168C PKH1Q03407 766 aa12.45□□□□□ -0.42
CCA1YER168C RIM15P43565 1770 aa12.45□□□□□ -0.42
CCA1YER168C KTR1P27810 393 aaKnown RBP12.44□□□□□ -0.42
CCA1YER168C PIB2P53191 635 aa12.44□□□□□ -0.42
CCA1YER168C KEX1P09620 729 aa12.44□□□□□ -0.42
CCA1YER168C RPN12P32496 274 aa12.44□□□□□ -0.42
CCA1YER168C RKM3P38222 552 aa12.44□□□□□ -0.42
CCA1YER168C KRE33P53914 1056 aaKnown RBP12.44□□□□□ -0.42
CCA1YER168C LCD1Q04377 747 aa12.44□□□□□ -0.42
CCA1YER168C PHM7Q12252 991 aa12.44□□□□□ -0.42
CCA1YER168C COBP00163 385 aa12.43□□□□□ -0.42
CCA1YER168C PIL1P53252 339 aaKnown RBP12.43□□□□□ -0.42
CCA1YER168C MTC5Q03897 1148 aa12.43□□□□□ -0.42
CCA1YER168C IMH1Q06704 911 aaKnown RBP12.43□□□□□ -0.42
CCA1YER168C SSK22P25390 1331 aaPredicted RBP12.43□□□□□ -0.42
CCA1YER168C AIM44Q99299 758 aa12.42□□□□□ -0.42
CCA1YER168C RPL19AP0CX82 189 aaKnown RBP12.41□□□□□ -0.42
CCA1YER168C RPL19BP0CX83 189 aaPredicted RBP12.41□□□□□ -0.42
CCA1YER168C EPS1P40557 701 aa12.41□□□□□ -0.42
CCA1YER168C MDG1P53885 366 aa12.41□□□□□ -0.42
CCA1YER168C FOX2Q02207 900 aaKnown RBP12.41□□□□□ -0.42
CCA1YER168C GYP5Q12344 894 aa12.41□□□□□ -0.42
CCA1YER168C GRX1P25373 110 aaKnown RBP12.4□□□□□ -0.42
CCA1YER168C YAH1Q12184 172 aaKnown RBP12.4□□□□□ -0.42
CCA1YER168C AI2P03876 854 aa12.4□□□□□ -0.42
CCA1YER168C CAB3P36076 571 aa12.4□□□□□ -0.42
CCA1YER168C STM1P39015 273 aaKnown RBP12.4□□□□□ -0.42
CCA1YER168C DOT5P40553 215 aa12.4□□□□□ -0.42
CCA1YER168C TSR3Q12094 313 aaKnown RBP12.4□□□□□ -0.42
CCA1YER168C RSM25P40496 264 aa12.39□□□□□ -0.43
CCA1YER168C SPO22P40511 975 aa12.39□□□□□ -0.43
CCA1YER168C PEX19Q07418 342 aa12.39□□□□□ -0.43
CCA1YER168C APC11Q12157 165 aa12.39□□□□□ -0.43
CCA1YER168C UTP10P42945 1769 aaKnown RBP12.39□□□□□ -0.43
CCA1YER168C YKR075CP36155 307 aa12.38□□□□□ -0.43
CCA1YER168C UBP16Q02863 499 aa12.38□□□□□ -0.43
CCA1YER168C YGL082WP53155 381 aa12.37□□□□□ -0.43
CCA1YER168C SUP35P05453 685 aaKnown RBP12.37□□□□□ -0.43
CCA1YER168C PRX1P34227 261 aaKnown RBP12.37□□□□□ -0.43
CCA1YER168C CTF18P49956 741 aa12.37□□□□□ -0.43
CCA1YER168C SEC18P18759 758 aaKnown RBP12.36□□□□□ -0.43
CCA1YER168C CWH41P53008 833 aa12.36□□□□□ -0.43
CCA1YER168C CTR9P89105 1077 aa12.36□□□□□ -0.43
CCA1YER168C RPN7Q06103 429 aaKnown RBP12.36□□□□□ -0.43
CCA1YER168C TPM1P17536 199 aaKnown RBP12.35□□□□□ -0.43
CCA1YER168C MBR1P23493 339 aa12.35□□□□□ -0.43
CCA1YER168C DID4P36108 232 aa12.35□□□□□ -0.43
CCA1YER168C PBY1P38254 753 aa12.35□□□□□ -0.43
CCA1YER168C SAC3P46674 1301 aa12.34□□□□□ -0.43
CCA1YER168C YNL193WP53870 558 aa12.34□□□□□ -0.43
CCA1YER168C SNU66Q12420 587 aaPredicted RBP12.34□□□□□ -0.43
CCA1YER168C PGA3Q12746 312 aaKnown RBP12.34□□□□□ -0.43
CCA1YER168C ELM1P32801 640 aa12.33□□□□□ -0.43
CCA1YER168C CIC1P38779 376 aaKnown RBP12.33□□□□□ -0.43
CCA1YER168C PEX14P53112 341 aa12.33□□□□□ -0.43
CCA1YER168C SER1P33330 395 aaKnown RBP12.33□□□□□ -0.44
CCA1YER168C OSH3P38713 996 aaKnown RBP12.33□□□□□ -0.44
CCA1YER168C CPA2P03965 1118 aaKnown RBP12.32□□□□□ -0.44
CCA1YER168C MCM2P29469 868 aa12.32□□□□□ -0.44
CCA1YER168C TTI1P36097 1038 aa12.32□□□□□ -0.44
CCA1YER168C CCT5P40413 562 aaKnown RBP12.32□□□□□ -0.44
CCA1YER168C VID28P40547 921 aa12.32□□□□□ -0.44
CCA1YER168C FRS2P15625 503 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 97.7 ms