RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C ALO1P54783 526 aaKnown RBP5.69□□□□□ -1.5
SMB1YER029C LEU3P08638 886 aa5.68□□□□□ -1.5
SMB1YER029C PRY1P47032 299 aa5.67□□□□□ -1.5
SMB1YER029C SPT2P06843 333 aaPredicted RBP5.65□□□□□ -1.5
SMB1YER029C DAT1P13483 248 aaKnown RBP5.65□□□□□ -1.5
SMB1YER029C FPS1P23900 669 aa5.65□□□□□ -1.5
SMB1YER029C UTR2P32623 467 aa5.65□□□□□ -1.5
SMB1YER029C ISR1Q06098 443 aaKnown RBP5.64□□□□□ -1.51
SMB1YER029C SSA2P10592 639 aaKnown RBP5.63□□□□□ -1.51
SMB1YER029C TBS1P38114 1094 aa5.62□□□□□ -1.51
SMB1YER029C UTP7P40055 554 aaKnown RBP5.62□□□□□ -1.51
SMB1YER029C MRX12P47084 519 aa5.62□□□□□ -1.51
SMB1YER029C MET1P36150 593 aa5.61□□□□□ -1.51
SMB1YER029C IRC24P40580 263 aa5.61□□□□□ -1.51
SMB1YER029C ALA1P40825 983 aaKnown RBP5.61□□□□□ -1.51
SMB1YER029C JJJ2P46997 583 aa5.6□□□□□ -1.51
SMB1YER029C OMA1P36163 345 aa5.59□□□□□ -1.51
SMB1YER029C EMP47P43555 445 aa5.59□□□□□ -1.51
SMB1YER029C SUM1P46676 1062 aa5.59□□□□□ -1.51
SMB1YER029C APL6P46682 809 aa5.59□□□□□ -1.51
SMB1YER029C YPL034WQ03083 165 aa5.59□□□□□ -1.51
SMB1YER029C IRE1P32361 1115 aa5.58□□□□□ -1.52
SMB1YER029C MRPL16P38064 232 aa5.58□□□□□ -1.52
SMB1YER029C PDC5P16467 563 aaKnown RBP5.57□□□□□ -1.52
SMB1YER029C KNS1P32350 737 aaPredicted RBP5.57□□□□□ -1.52
SMB1YER029C ISF1P32488 338 aa5.56□□□□□ -1.52
SMB1YER029C MCM16Q12262 181 aa5.56□□□□□ -1.52
SMB1YER029C SHM1P37292 490 aaPredicted RBP5.55□□□□□ -1.52
SMB1YER029C HAL5P38970 855 aaKnown RBP5.55□□□□□ -1.52
SMB1YER029C STB3Q12427 513 aa5.55□□□□□ -1.52
SMB1YER029C PDC6P26263 563 aaKnown RBP5.53□□□□□ -1.52
SMB1YER029C CSE4P36012 229 aa5.53□□□□□ -1.52
SMB1YER029C SLX8P40072 274 aa5.53□□□□□ -1.52
SMB1YER029C INP52P50942 1183 aa5.53□□□□□ -1.52
SMB1YER029C PSH1Q12161 406 aa5.53□□□□□ -1.52
SMB1YER029C SPT5P27692 1063 aaKnown RBP5.52□□□□□ -1.53
SMB1YER029C AVT1P47082 602 aa5.51□□□□□ -1.53
SMB1YER029C TY1A-DR2Q03964 440 aaKnown RBP5.51□□□□□ -1.53
SMB1YER029C SPR3P41901 512 aa5.5□□□□□ -1.53
SMB1YER029C RPN1P38764 993 aaKnown RBP5.49□□□□□ -1.53
SMB1YER029C HDA3Q06623 655 aa5.49□□□□□ -1.53
SMB1YER029C SOH1P38633 127 aa5.48□□□□□ -1.53
SMB1YER029C ATG3P40344 310 aa5.48□□□□□ -1.53
SMB1YER029C UTP13Q05946 817 aaKnown RBP5.48□□□□□ -1.53
SMB1YER029C RPP1AP05318 106 aaPredicted RBP5.46□□□□□ -1.54
SMB1YER029C KIN1P13185 1064 aa5.46□□□□□ -1.54
SMB1YER029C RPS31P05759 152 aaKnown RBP5.45□□□□□ -1.54
SMB1YER029C YDJ1P25491 409 aaKnown RBP5.45□□□□□ -1.54
SMB1YER029C LEU1P07264 779 aaKnown RBP5.44□□□□□ -1.54
SMB1YER029C YBL036CP38197 257 aa5.44□□□□□ -1.54
SMB1YER029C TPS3P38426 1054 aaKnown RBP5.44□□□□□ -1.54
SMB1YER029C HPC2Q01448 625 aa5.44□□□□□ -1.54
SMB1YER029C MSC7P38694 644 aa5.43□□□□□ -1.54
SMB1YER029C YPQ2Q06328 317 aa5.43□□□□□ -1.54
SMB1YER029C YPP1P46951 817 aa5.42□□□□□ -1.54
SMB1YER029C BUD9P53226 547 aa5.42□□□□□ -1.54
SMB1YER029C TFB3Q03290 321 aa5.42□□□□□ -1.54
SMB1YER029C NHA1Q99271 985 aa5.41□□□□□ -1.54
SMB1YER029C SWI5P08153 709 aa5.4□□□□□ -1.54
SMB1YER029C RGP1P16664 663 aa5.4□□□□□ -1.54
SMB1YER029C ALD2P47771 506 aa5.4□□□□□ -1.54
SMB1YER029C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
SMB1YER029C PGM2P37012 569 aaKnown RBP5.39□□□□□ -1.55
SMB1YER029C GUA1P38625 525 aaKnown RBP5.39□□□□□ -1.55
SMB1YER029C YTA6P40328 754 aa5.39□□□□□ -1.55
SMB1YER029C GAS5Q08193 484 aa5.39□□□□□ -1.55
SMB1YER029C ALG14P38242 237 aa5.38□□□□□ -1.55
SMB1YER029C LEO1P38439 464 aa5.38□□□□□ -1.55
SMB1YER029C AIM9P40053 627 aaKnown RBP5.36□□□□□ -1.55
SMB1YER029C YNL165WP53891 406 aa5.36□□□□□ -1.55
SMB1YER029C MCM1P11746 286 aa5.35□□□□□ -1.55
SMB1YER029C HEH2Q03281 663 aa5.35□□□□□ -1.55
SMB1YER029C BRL1P38770 471 aa5.34□□□□□ -1.55
SMB1YER029C TRP3P00937 484 aa5.33□□□□□ -1.56
SMB1YER029C AI3P03877 415 aa5.33□□□□□ -1.56
SMB1YER029C RPS6AP0CX37 236 aaKnown RBP5.33□□□□□ -1.56
SMB1YER029C RPS6BP0CX38 236 aaPredicted RBP5.33□□□□□ -1.56
SMB1YER029C MLF3P32047 452 aa5.33□□□□□ -1.56
SMB1YER029C YKR073CP36153 106 aa5.33□□□□□ -1.56
SMB1YER029C BIO2P32451 375 aa5.32□□□□□ -1.56
SMB1YER029C LIP5P32875 414 aa5.32□□□□□ -1.56
SMB1YER029C PGM1P33401 570 aaKnown RBP5.32□□□□□ -1.56
SMB1YER029C PRK1P40494 810 aa5.32□□□□□ -1.56
SMB1YER029C YFL034WP43564 1073 aa5.32□□□□□ -1.56
SMB1YER029C NAR1P23503 491 aaKnown RBP5.31□□□□□ -1.56
SMB1YER029C GIS4Q04233 774 aa5.31□□□□□ -1.56
SMB1YER029C ENO2P00925 437 aaKnown RBP5.3□□□□□ -1.56
SMB1YER029C SUP45P12385 437 aaKnown RBP5.3□□□□□ -1.56
SMB1YER029C SAC7P17121 654 aa5.3□□□□□ -1.56
SMB1YER029C NAB2P32505 525 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SMB1YER029C Q0182Q9ZZW1 134 aa5.29□□□□□ -1.56
SMB1YER029C NTH2P35172 780 aa5.28□□□□□ -1.56
SMB1YER029C NCL1P38205 684 aaKnown RBP5.28□□□□□ -1.56
SMB1YER029C RRM3P38766 723 aa5.28□□□□□ -1.56
SMB1YER029C ARI1P53111 347 aaKnown RBP5.28□□□□□ -1.56
SMB1YER029C YNL108CP53929 270 aa5.28□□□□□ -1.56
SMB1YER029C MED7Q08278 222 aa5.28□□□□□ -1.56
SMB1YER029C COQ2P32378 372 aa5.27□□□□□ -1.57
SMB1YER029C RIM21P48565 533 aa5.27□□□□□ -1.57
SMB1YER029C MTO1P53070 669 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms