RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W TY1A-DR3Q12441 440 aa7.71□□□□□ -1.18
RPN9YDR427W ALA1P40825 983 aaKnown RBP7.7□□□□□ -1.18
RPN9YDR427W ISF1P32488 338 aa7.69□□□□□ -1.18
RPN9YDR427W UTP7P40055 554 aaKnown RBP7.68□□□□□ -1.18
RPN9YDR427W YNR014WP53719 212 aa7.68□□□□□ -1.18
RPN9YDR427W ATG3P40344 310 aa7.67□□□□□ -1.18
RPN9YDR427W SUM1P46676 1062 aa7.67□□□□□ -1.18
RPN9YDR427W YBL036CP38197 257 aa7.66□□□□□ -1.18
RPN9YDR427W FPS1P23900 669 aa7.65□□□□□ -1.18
RPN9YDR427W RPN1P38764 993 aaKnown RBP7.65□□□□□ -1.18
RPN9YDR427W JJJ2P46997 583 aa7.65□□□□□ -1.18
RPN9YDR427W MCX1P38323 520 aaPredicted RBP7.64□□□□□ -1.19
RPN9YDR427W LEO1P38439 464 aa7.64□□□□□ -1.19
RPN9YDR427W GUA1P38625 525 aaKnown RBP7.64□□□□□ -1.19
RPN9YDR427W UTP13Q05946 817 aaKnown RBP7.64□□□□□ -1.19
RPN9YDR427W IRE1P32361 1115 aa7.63□□□□□ -1.19
RPN9YDR427W HAL5P38970 855 aaKnown RBP7.63□□□□□ -1.19
RPN9YDR427W GPM1P00950 247 aaKnown RBP7.62□□□□□ -1.19
RPN9YDR427W YPP1P46951 817 aa7.62□□□□□ -1.19
RPN9YDR427W SLX8P40072 274 aa7.61□□□□□ -1.19
RPN9YDR427W YDJ1P25491 409 aaKnown RBP7.6□□□□□ -1.19
RPN9YDR427W MET1P36150 593 aa7.6□□□□□ -1.19
RPN9YDR427W BRL1P38770 471 aa7.6□□□□□ -1.19
RPN9YDR427W BOI2P39969 1040 aa7.6□□□□□ -1.19
RPN9YDR427W HPC2Q01448 625 aa7.6□□□□□ -1.19
RPN9YDR427W SOH1P38633 127 aa7.59□□□□□ -1.19
RPN9YDR427W HDA3Q06623 655 aa7.59□□□□□ -1.19
RPN9YDR427W MRPL16P38064 232 aa7.57□□□□□ -1.2
RPN9YDR427W SHM1P37292 490 aaPredicted RBP7.56□□□□□ -1.2
RPN9YDR427W PDC6P26263 563 aaKnown RBP7.54□□□□□ -1.2
RPN9YDR427W KNS1P32350 737 aaPredicted RBP7.54□□□□□ -1.2
RPN9YDR427W PSH1Q12161 406 aa7.54□□□□□ -1.2
RPN9YDR427W STB3Q12427 513 aa7.54□□□□□ -1.2
RPN9YDR427W RPP1AP05318 106 aaPredicted RBP7.53□□□□□ -1.2
RPN9YDR427W YCK2P23292 546 aaKnown RBP7.53□□□□□ -1.2
RPN9YDR427W YDR215CQ12240 137 aa7.53□□□□□ -1.2
RPN9YDR427W TFB3Q03290 321 aa7.52□□□□□ -1.21
RPN9YDR427W PDC5P16467 563 aaKnown RBP7.51□□□□□ -1.21
RPN9YDR427W SPR3P41901 512 aa7.5□□□□□ -1.21
RPN9YDR427W TAT1P38085 619 aa7.49□□□□□ -1.21
RPN9YDR427W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
RPN9YDR427W AMN1P38285 549 aaPredicted RBP7.48□□□□□ -1.21
RPN9YDR427W SLN1P39928 1220 aaPredicted RBP7.48□□□□□ -1.21
RPN9YDR427W BIO2P32451 375 aa7.47□□□□□ -1.21
RPN9YDR427W LSB6P42951 607 aa7.47□□□□□ -1.21
RPN9YDR427W TY1A-DR2Q03964 440 aaKnown RBP7.47□□□□□ -1.21
RPN9YDR427W YPQ2Q06328 317 aa7.47□□□□□ -1.21
RPN9YDR427W RPS31P05759 152 aaKnown RBP7.46□□□□□ -1.22
RPN9YDR427W SWI5P08153 709 aa7.46□□□□□ -1.22
RPN9YDR427W SUP45P12385 437 aaKnown RBP7.46□□□□□ -1.22
RPN9YDR427W AIM9P40053 627 aaKnown RBP7.45□□□□□ -1.22
RPN9YDR427W YFL034WP43564 1073 aa7.45□□□□□ -1.22
RPN9YDR427W YNL108CP53929 270 aa7.45□□□□□ -1.22
RPN9YDR427W MCA1Q08601 432 aa7.45□□□□□ -1.22
RPN9YDR427W LEU1P07264 779 aaKnown RBP7.44□□□□□ -1.22
RPN9YDR427W PKC1P24583 1151 aa7.44□□□□□ -1.22
RPN9YDR427W YTA6P40328 754 aa7.44□□□□□ -1.22
RPN9YDR427W ENO2P00925 437 aaKnown RBP7.43□□□□□ -1.22
RPN9YDR427W MCM1P11746 286 aa7.41□□□□□ -1.22
RPN9YDR427W RPS6AP0CX37 236 aaKnown RBP7.4□□□□□ -1.22
RPN9YDR427W RPS6BP0CX38 236 aaPredicted RBP7.4□□□□□ -1.22
RPN9YDR427W RIM21P48565 533 aa7.4□□□□□ -1.22
RPN9YDR427W GLT1Q12680 2145 aaKnown RBP7.39□□□□□ -1.23
RPN9YDR427W RGP1P16664 663 aa7.39□□□□□ -1.23
RPN9YDR427W MAC1P35192 417 aa7.39□□□□□ -1.23
RPN9YDR427W MSC7P38694 644 aa7.38□□□□□ -1.23
RPN9YDR427W PRY1P47032 299 aa7.38□□□□□ -1.23
RPN9YDR427W ALD2P47771 506 aa7.38□□□□□ -1.23
RPN9YDR427W TPS3P38426 1054 aaKnown RBP7.36□□□□□ -1.23
RPN9YDR427W YPL034WQ03083 165 aa7.36□□□□□ -1.23
RPN9YDR427W NHA1Q99271 985 aa7.36□□□□□ -1.23
RPN9YDR427W NTH2P35172 780 aa7.35□□□□□ -1.23
RPN9YDR427W YNL165WP53891 406 aa7.35□□□□□ -1.23
RPN9YDR427W HEH2Q03281 663 aa7.35□□□□□ -1.23
RPN9YDR427W RDS2P19541 446 aaKnown RBP7.34□□□□□ -1.23
RPN9YDR427W MLF3P32047 452 aa7.32□□□□□ -1.24
RPN9YDR427W ALG14P38242 237 aa7.32□□□□□ -1.24
RPN9YDR427W Q0182Q9ZZW1 134 aa7.32□□□□□ -1.24
RPN9YDR427W PGM2P37012 569 aaKnown RBP7.31□□□□□ -1.24
RPN9YDR427W TSC13Q99190 310 aa7.31□□□□□ -1.24
RPN9YDR427W YJL007CP47080 104 aa7.3□□□□□ -1.24
RPN9YDR427W PDI1P17967 522 aaKnown RBP7.29□□□□□ -1.24
RPN9YDR427W NCL1P38205 684 aaKnown RBP7.28□□□□□ -1.24
RPN9YDR427W ALO1P54783 526 aaKnown RBP7.28□□□□□ -1.24
RPN9YDR427W CYT1P07143 309 aa7.27□□□□□ -1.25
RPN9YDR427W NAB2P32505 525 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
RPN9YDR427W MTO1P53070 669 aa7.27□□□□□ -1.25
RPN9YDR427W BUD9P53226 547 aa7.27□□□□□ -1.25
RPN9YDR427W OMA1P36163 345 aa7.26□□□□□ -1.25
RPN9YDR427W UTP4Q06679 776 aaKnown RBP7.26□□□□□ -1.25
RPN9YDR427W PRK1P40494 810 aa7.25□□□□□ -1.25
RPN9YDR427W MRX10Q05648 414 aa7.25□□□□□ -1.25
RPN9YDR427W SKP1P52286 194 aa7.24□□□□□ -1.25
RPN9YDR427W ENO1P00924 437 aaKnown RBP7.23□□□□□ -1.25
RPN9YDR427W GIS4Q04233 774 aa7.23□□□□□ -1.25
RPN9YDR427W NAR1P23503 491 aaKnown RBP7.22□□□□□ -1.25
RPN9YDR427W AI3P03877 415 aa7.21□□□□□ -1.26
RPN9YDR427W SCD5P34758 872 aa7.21□□□□□ -1.26
RPN9YDR427W INP52P50942 1183 aa7.21□□□□□ -1.26
RPN9YDR427W DMA2P53924 522 aa7.21□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms