RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A NAF1P53919 492 aaKnown RBP6.46□□□□□ -1.38
YDR170W-AYDR170W-A WTM2Q12206 467 aa6.46□□□□□ -1.38
YDR170W-AYDR170W-A ALO1P54783 526 aaKnown RBP6.45□□□□□ -1.38
YDR170W-AYDR170W-A YPL034WQ03083 165 aa6.45□□□□□ -1.38
YDR170W-AYDR170W-A KNS1P32350 737 aaPredicted RBP6.44□□□□□ -1.38
YDR170W-AYDR170W-A PDC5P16467 563 aaKnown RBP6.43□□□□□ -1.38
YDR170W-AYDR170W-A PRY1P47032 299 aa6.43□□□□□ -1.38
YDR170W-AYDR170W-A INP52P50942 1183 aa6.42□□□□□ -1.38
YDR170W-AYDR170W-A RAD59Q12223 238 aa6.42□□□□□ -1.38
YDR170W-AYDR170W-A OMA1P36163 345 aa6.4□□□□□ -1.39
YDR170W-AYDR170W-A FRA1Q07825 749 aa6.39□□□□□ -1.39
YDR170W-AYDR170W-A DMA2P53924 522 aa6.38□□□□□ -1.39
YDR170W-AYDR170W-A SPT2P06843 333 aaPredicted RBP6.37□□□□□ -1.39
YDR170W-AYDR170W-A STE20Q03497 939 aaKnown RBP6.37□□□□□ -1.39
YDR170W-AYDR170W-A DAT1P13483 248 aaKnown RBP6.36□□□□□ -1.39
YDR170W-AYDR170W-A MRPL16P38064 232 aa6.36□□□□□ -1.39
YDR170W-AYDR170W-A JJJ2P46997 583 aa6.36□□□□□ -1.39
YDR170W-AYDR170W-A UTR2P32623 467 aa6.35□□□□□ -1.39
YDR170W-AYDR170W-A GUA1P38625 525 aaKnown RBP6.35□□□□□ -1.39
YDR170W-AYDR170W-A UTP7P40055 554 aaKnown RBP6.35□□□□□ -1.39
YDR170W-AYDR170W-A CSN12P47130 423 aa6.35□□□□□ -1.39
YDR170W-AYDR170W-A TAF7Q05021 590 aa6.35□□□□□ -1.39
YDR170W-AYDR170W-A IRE1P32361 1115 aa6.34□□□□□ -1.39
YDR170W-AYDR170W-A MAK16P10962 306 aaPredicted RBP6.33□□□□□ -1.4
YDR170W-AYDR170W-A ALA1P40825 983 aaKnown RBP6.33□□□□□ -1.4
YDR170W-AYDR170W-A TY1A-DR2Q03964 440 aaKnown RBP6.33□□□□□ -1.4
YDR170W-AYDR170W-A SHM1P37292 490 aaPredicted RBP6.32□□□□□ -1.4
YDR170W-AYDR170W-A ISR1Q06098 443 aaKnown RBP6.32□□□□□ -1.4
YDR170W-AYDR170W-A STB3Q12427 513 aa6.32□□□□□ -1.4
YDR170W-AYDR170W-A SUM1P46676 1062 aa6.31□□□□□ -1.4
YDR170W-AYDR170W-A SPR3P41901 512 aa6.3□□□□□ -1.4
YDR170W-AYDR170W-A PSH1Q12161 406 aa6.3□□□□□ -1.4
YDR170W-AYDR170W-A TBS1P38114 1094 aa6.29□□□□□ -1.4
YDR170W-AYDR170W-A AVT1P47082 602 aa6.29□□□□□ -1.4
YDR170W-AYDR170W-A PDC6P26263 563 aaKnown RBP6.28□□□□□ -1.4
YDR170W-AYDR170W-A TPS3P38426 1054 aaKnown RBP6.28□□□□□ -1.4
YDR170W-AYDR170W-A APL6P46682 809 aa6.26□□□□□ -1.41
YDR170W-AYDR170W-A HPC2Q01448 625 aa6.26□□□□□ -1.41
YDR170W-AYDR170W-A SSA2P10592 639 aaKnown RBP6.25□□□□□ -1.41
YDR170W-AYDR170W-A MRX12P47084 519 aa6.25□□□□□ -1.41
YDR170W-AYDR170W-A HGH1P48362 394 aaKnown RBP6.25□□□□□ -1.41
YDR170W-AYDR170W-A BUD9P53226 547 aa6.25□□□□□ -1.41
YDR170W-AYDR170W-A TFB3Q03290 321 aa6.24□□□□□ -1.41
YDR170W-AYDR170W-A MSC7P38694 644 aa6.23□□□□□ -1.41
YDR170W-AYDR170W-A BRL1P38770 471 aa6.22□□□□□ -1.41
YDR170W-AYDR170W-A HAL5P38970 855 aaKnown RBP6.22□□□□□ -1.41
YDR170W-AYDR170W-A PGM1P33401 570 aaKnown RBP6.21□□□□□ -1.42
YDR170W-AYDR170W-A SLX8P40072 274 aa6.21□□□□□ -1.42
YDR170W-AYDR170W-A NHA1Q99271 985 aa6.21□□□□□ -1.42
YDR170W-AYDR170W-A EMP47P43555 445 aa6.2□□□□□ -1.42
YDR170W-AYDR170W-A RPS31P05759 152 aaKnown RBP6.19□□□□□ -1.42
YDR170W-AYDR170W-A PKC1P24583 1151 aa6.19□□□□□ -1.42
YDR170W-AYDR170W-A PGM2P37012 569 aaKnown RBP6.18□□□□□ -1.42
YDR170W-AYDR170W-A AI3P03877 415 aa6.17□□□□□ -1.42
YDR170W-AYDR170W-A RPP1AP05318 106 aaPredicted RBP6.17□□□□□ -1.42
YDR170W-AYDR170W-A LEU1P07264 779 aaKnown RBP6.17□□□□□ -1.42
YDR170W-AYDR170W-A ALG14P38242 237 aa6.17□□□□□ -1.42
YDR170W-AYDR170W-A AOS1Q06624 347 aa6.17□□□□□ -1.42
YDR170W-AYDR170W-A ISF1P32488 338 aa6.16□□□□□ -1.42
YDR170W-AYDR170W-A MCM16Q12262 181 aa6.14□□□□□ -1.43
YDR170W-AYDR170W-A YKR073CP36153 106 aa6.13□□□□□ -1.43
YDR170W-AYDR170W-A ALD2P47771 506 aa6.13□□□□□ -1.43
YDR170W-AYDR170W-A HDA3Q06623 655 aa6.12□□□□□ -1.43
YDR170W-AYDR170W-A MED7Q08278 222 aa6.12□□□□□ -1.43
YDR170W-AYDR170W-A ELM1P32801 640 aa6.11□□□□□ -1.43
YDR170W-AYDR170W-A YBL036CP38197 257 aa6.11□□□□□ -1.43
YDR170W-AYDR170W-A YPQ2Q06328 317 aa6.11□□□□□ -1.43
YDR170W-AYDR170W-A TRP3P00937 484 aa6.1□□□□□ -1.43
YDR170W-AYDR170W-A RGP1P16664 663 aa6.1□□□□□ -1.43
YDR170W-AYDR170W-A SAC7P17121 654 aa6.1□□□□□ -1.43
YDR170W-AYDR170W-A YJL007CP47080 104 aa6.1□□□□□ -1.43
YDR170W-AYDR170W-A ARI1P53111 347 aaKnown RBP6.1□□□□□ -1.43
YDR170W-AYDR170W-A GAS5Q08193 484 aa6.1□□□□□ -1.43
YDR170W-AYDR170W-A RLF2Q12495 606 aa6.1□□□□□ -1.43
YDR170W-AYDR170W-A NAR1P23503 491 aaKnown RBP6.08□□□□□ -1.44
YDR170W-AYDR170W-A BIM1P40013 344 aa6.08□□□□□ -1.44
YDR170W-AYDR170W-A LIP5P32875 414 aa6.07□□□□□ -1.44
YDR170W-AYDR170W-A UTP13Q05946 817 aaKnown RBP6.07□□□□□ -1.44
YDR170W-AYDR170W-A CSE4P36012 229 aa6.06□□□□□ -1.44
YDR170W-AYDR170W-A KAE1P36132 386 aa6.06□□□□□ -1.44
YDR170W-AYDR170W-A SOH1P38633 127 aa6.06□□□□□ -1.44
YDR170W-AYDR170W-A ATG32P40458 529 aa6.06□□□□□ -1.44
YDR170W-AYDR170W-A PRK1P40494 810 aa6.06□□□□□ -1.44
YDR170W-AYDR170W-A GIS4Q04233 774 aa6.06□□□□□ -1.44
YDR170W-AYDR170W-A COQ2P32378 372 aa6.05□□□□□ -1.44
YDR170W-AYDR170W-A RRM3P38766 723 aa6.05□□□□□ -1.44
YDR170W-AYDR170W-A HEH2Q03281 663 aa6.05□□□□□ -1.44
YDR170W-AYDR170W-A BIO2P32451 375 aa6.04□□□□□ -1.44
YDR170W-AYDR170W-A TOS1P38288 455 aa6.04□□□□□ -1.44
YDR170W-AYDR170W-A CTH1P47976 325 aa6.04□□□□□ -1.44
YDR170W-AYDR170W-A YNL165WP53891 406 aa6.04□□□□□ -1.44
YDR170W-AYDR170W-A SPT5P27692 1063 aaKnown RBP6.03□□□□□ -1.44
YDR170W-AYDR170W-A PUB1P32588 453 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
YDR170W-AYDR170W-A SFA1P32771 386 aa6.03□□□□□ -1.44
YDR170W-AYDR170W-A YLR122CQ12312 125 aa6.03□□□□□ -1.44
YDR170W-AYDR170W-A YTA6P40328 754 aa6.02□□□□□ -1.45
YDR170W-AYDR170W-A ATG3P40344 310 aa6.02□□□□□ -1.45
YDR170W-AYDR170W-A RPL34BP40525 121 aaKnown RBP6.02□□□□□ -1.45
YDR170W-AYDR170W-A YNL108CP53929 270 aa6.02□□□□□ -1.45
YDR170W-AYDR170W-A SWI5P08153 709 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms