RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A MED7Q08278 222 aa3.63□□□□□ -1.83
TFB5YDR079C-A MRPL16P38064 232 aa3.62□□□□□ -1.83
TFB5YDR079C-A UBP5P39944 805 aa3.62□□□□□ -1.83
TFB5YDR079C-A LIP5P32875 414 aa3.61□□□□□ -1.83
TFB5YDR079C-A FRA1Q07825 749 aa3.61□□□□□ -1.83
TFB5YDR079C-A WTM2Q12206 467 aa3.61□□□□□ -1.83
TFB5YDR079C-A TRP3P00937 484 aa3.6□□□□□ -1.83
TFB5YDR079C-A AI3P03877 415 aa3.6□□□□□ -1.83
TFB5YDR079C-A DIT2P21595 489 aa3.6□□□□□ -1.83
TFB5YDR079C-A CTH1P47976 325 aa3.6□□□□□ -1.83
TFB5YDR079C-A JJJ2P46997 583 aa3.59□□□□□ -1.83
TFB5YDR079C-A STB3Q12427 513 aa3.59□□□□□ -1.83
TFB5YDR079C-A YCR015CP25616 317 aa3.58□□□□□ -1.84
TFB5YDR079C-A PUB1P32588 453 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
TFB5YDR079C-A TOS1P38288 455 aa3.58□□□□□ -1.84
TFB5YDR079C-A SPR3P41901 512 aa3.58□□□□□ -1.84
TFB5YDR079C-A NHA1Q99271 985 aa3.58□□□□□ -1.84
TFB5YDR079C-A IRE1P32361 1115 aa3.57□□□□□ -1.84
TFB5YDR079C-A SHM1P37292 490 aaPredicted RBP3.56□□□□□ -1.84
TFB5YDR079C-A MSC7P38694 644 aa3.56□□□□□ -1.84
TFB5YDR079C-A PSH1Q12161 406 aa3.56□□□□□ -1.84
TFB5YDR079C-A YKL222CP35995 705 aa3.55□□□□□ -1.84
TFB5YDR079C-A ARI1P53111 347 aaKnown RBP3.55□□□□□ -1.84
TFB5YDR079C-A SPT2P06843 333 aaPredicted RBP3.54□□□□□ -1.84
TFB5YDR079C-A SAC7P17121 654 aa3.54□□□□□ -1.84
TFB5YDR079C-A ARG8P18544 423 aa3.54□□□□□ -1.84
TFB5YDR079C-A RNQ1P25367 405 aa3.54□□□□□ -1.84
TFB5YDR079C-A PDC6P26263 563 aaKnown RBP3.54□□□□□ -1.84
TFB5YDR079C-A KAE1P36132 386 aa3.54□□□□□ -1.84
TFB5YDR079C-A PGM2P37012 569 aaKnown RBP3.54□□□□□ -1.84
TFB5YDR079C-A ALG14P38242 237 aa3.54□□□□□ -1.84
TFB5YDR079C-A BRE4Q07660 1125 aa3.54□□□□□ -1.84
TFB5YDR079C-A YLR122CQ12312 125 aa3.54□□□□□ -1.84
TFB5YDR079C-A GUT2P32191 649 aa3.53□□□□□ -1.84
TFB5YDR079C-A COQ2P32378 372 aa3.53□□□□□ -1.84
TFB5YDR079C-A UTP7P40055 554 aaKnown RBP3.53□□□□□ -1.84
TFB5YDR079C-A PKH3Q03306 898 aaPredicted RBP3.53□□□□□ -1.84
TFB5YDR079C-A ALA1P40825 983 aaKnown RBP3.52□□□□□ -1.85
TFB5YDR079C-A GAS5Q08193 484 aa3.52□□□□□ -1.85
TFB5YDR079C-A UTR2P32623 467 aa3.51□□□□□ -1.85
TFB5YDR079C-A SUM1P46676 1062 aa3.51□□□□□ -1.85
TFB5YDR079C-A DAT1P13483 248 aaKnown RBP3.5□□□□□ -1.85
TFB5YDR079C-A MAG2Q06436 670 aaKnown RBP3.5□□□□□ -1.85
TFB5YDR079C-A NAR1P23503 491 aaKnown RBP3.48□□□□□ -1.85
TFB5YDR079C-A SFA1P32771 386 aa3.48□□□□□ -1.85
TFB5YDR079C-A RPP1AP05318 106 aaPredicted RBP3.47□□□□□ -1.85
TFB5YDR079C-A KTR1P27810 393 aaKnown RBP3.47□□□□□ -1.85
TFB5YDR079C-A RRM3P38766 723 aa3.47□□□□□ -1.85
TFB5YDR079C-A LEU1P07264 779 aaKnown RBP3.46□□□□□ -1.86
TFB5YDR079C-A TBS1P38114 1094 aa3.46□□□□□ -1.86
TFB5YDR079C-A GIS4Q04233 774 aa3.46□□□□□ -1.86
TFB5YDR079C-A RPS31P05759 152 aaKnown RBP3.45□□□□□ -1.86
TFB5YDR079C-A YGR130CP53278 816 aa3.45□□□□□ -1.86
TFB5YDR079C-A ISR1Q06098 443 aaKnown RBP3.45□□□□□ -1.86
TFB5YDR079C-A ESC8Q08119 714 aa3.45□□□□□ -1.86
TFB5YDR079C-A MCM16Q12262 181 aa3.45□□□□□ -1.86
TFB5YDR079C-A NAB2P32505 525 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
TFB5YDR079C-A STE20Q03497 939 aaKnown RBP3.44□□□□□ -1.86
TFB5YDR079C-A SAF1P38352 637 aa3.43□□□□□ -1.86
TFB5YDR079C-A NIT1P40447 199 aa3.43□□□□□ -1.86
TFB5YDR079C-A PRK1P40494 810 aa3.43□□□□□ -1.86
TFB5YDR079C-A ALD2P47771 506 aa3.43□□□□□ -1.86
TFB5YDR079C-A CHS2P14180 963 aa3.42□□□□□ -1.86
TFB5YDR079C-A RGP1P16664 663 aa3.41□□□□□ -1.86
TFB5YDR079C-A NGR1P32831 672 aaKnown RBP3.41□□□□□ -1.86
TFB5YDR079C-A SEG2P34250 1132 aa3.41□□□□□ -1.86
TFB5YDR079C-A TAF1P46677 1066 aa3.41□□□□□ -1.86
TFB5YDR079C-A APL6P46682 809 aa3.41□□□□□ -1.86
TFB5YDR079C-A RAD59Q12223 238 aa3.41□□□□□ -1.86
TFB5YDR079C-A SLX8P40072 274 aa3.4□□□□□ -1.87
TFB5YDR079C-A HEH2Q03281 663 aa3.4□□□□□ -1.87
TFB5YDR079C-A CYC7P00045 113 aa3.39□□□□□ -1.87
TFB5YDR079C-A GIP4P39732 760 aa3.39□□□□□ -1.87
TFB5YDR079C-A ATF2P53296 535 aa3.39□□□□□ -1.87
TFB5YDR079C-A MAK16P10962 306 aaPredicted RBP3.38□□□□□ -1.87
TFB5YDR079C-A RSC6P25632 483 aa3.38□□□□□ -1.87
TFB5YDR079C-A HAL5P38970 855 aaKnown RBP3.38□□□□□ -1.87
TFB5YDR079C-A SPO74P45819 413 aa3.38□□□□□ -1.87
TFB5YDR079C-A LRG1P35688 1017 aa3.37□□□□□ -1.87
TFB5YDR079C-A SEA4P38164 1038 aa3.36□□□□□ -1.87
TFB5YDR079C-A MRX12P47084 519 aa3.36□□□□□ -1.87
TFB5YDR079C-A YPQ2Q06328 317 aa3.36□□□□□ -1.87
TFB5YDR079C-A TAD3Q9URQ3 322 aa3.36□□□□□ -1.87
TFB5YDR079C-A YPT53P36019 220 aa3.35□□□□□ -1.87
TFB5YDR079C-A PUF3Q07807 879 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
TFB5YDR079C-A AKR1P39010 764 aa3.34□□□□□ -1.87
TFB5YDR079C-A ECL1P48235 211 aa3.33□□□□□ -1.88
TFB5YDR079C-A PRP43P53131 767 aaKnown RBP3.33□□□□□ -1.88
TFB5YDR079C-A NAM7P30771 971 aaKnown RBP3.32□□□□□ -1.88
TFB5YDR079C-A YNL165WP53891 406 aa3.32□□□□□ -1.88
TFB5YDR079C-A HPC2Q01448 625 aa3.32□□□□□ -1.88
TFB5YDR079C-A HDA2Q06629 674 aa3.32□□□□□ -1.88
TFB5YDR079C-A TY1A-NL1Q12391 440 aaKnown RBP3.32□□□□□ -1.88
TFB5YDR079C-A POL12P38121 705 aaPredicted RBP3.3□□□□□ -1.88
TFB5YDR079C-A YTA6P40328 754 aa3.3□□□□□ -1.88
TFB5YDR079C-A EMP47P43555 445 aa3.3□□□□□ -1.88
TFB5YDR079C-A HDA3Q06623 655 aa3.3□□□□□ -1.88
TFB5YDR079C-A SLP1Q12232 587 aa3.3□□□□□ -1.88
TFB5YDR079C-A GAS1P22146 559 aaKnown RBP3.29□□□□□ -1.88
TFB5YDR079C-A SPB4P25808 606 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms