RNA–Protein interactions for RNA: YBR178W

YBR178W, Transcript of Dubious open reading frame, yeast

Gene YBR178W, Length 375 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR178W	YBR178W	TOS1	P38288	455 aa		4.56	□□□□□ -1.68
YBR178W	YBR178W	RSC30	P38781	883 aa		4.56	□□□□□ -1.68
YBR178W	YBR178W	ATG20	Q07528	640 aa		4.56	□□□□□ -1.68
YBR178W	YBR178W	RNQ1	P25367	405 aa		4.55	□□□□□ -1.68
YBR178W	YBR178W	YCR015C	P25616	317 aa		4.54	□□□□□ -1.68
YBR178W	YBR178W	STB3	Q12427	513 aa		4.54	□□□□□ -1.68
YBR178W	YBR178W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
YBR178W	YBR178W	KAE1	P36132	386 aa		4.53	□□□□□ -1.68
YBR178W	YBR178W	NUP42	P49686	430 aa	Known RBP	4.53	□□□□□ -1.68
YBR178W	YBR178W	FRA1	Q07825	749 aa		4.53	□□□□□ -1.68
YBR178W	YBR178W	NHA1	Q99271	985 aa		4.53	□□□□□ -1.68
YBR178W	YBR178W	AI3	P03877	415 aa		4.52	□□□□□ -1.69
YBR178W	YBR178W	TEC1	P18412	486 aa		4.52	□□□□□ -1.69
YBR178W	YBR178W	BRE4	Q07660	1125 aa		4.52	□□□□□ -1.69
YBR178W	YBR178W	WTM2	Q12206	467 aa		4.52	□□□□□ -1.69
YBR178W	YBR178W	COQ2	P32378	372 aa		4.51	□□□□□ -1.69
YBR178W	YBR178W	PGM2	P37012	569 aa	Known RBP	4.5	□□□□□ -1.69
YBR178W	YBR178W	GAS5	Q08193	484 aa		4.5	□□□□□ -1.69
YBR178W	YBR178W	SAC7	P17121	654 aa		4.49	□□□□□ -1.69
YBR178W	YBR178W	IRE1	P32361	1115 aa		4.49	□□□□□ -1.69
YBR178W	YBR178W	ALA1	P40825	983 aa	Known RBP	4.49	□□□□□ -1.69
YBR178W	YBR178W	SPR3	P41901	512 aa		4.49	□□□□□ -1.69
YBR178W	YBR178W	YPR084W	Q06821	456 aa		4.49	□□□□□ -1.69
YBR178W	YBR178W	ALG14	P38242	237 aa		4.48	□□□□□ -1.69
YBR178W	YBR178W	UTP7	P40055	554 aa	Known RBP	4.47	□□□□□ -1.69
YBR178W	YBR178W	CKB1	P43639	278 aa		4.47	□□□□□ -1.69
YBR178W	YBR178W	JJJ2	P46997	583 aa		4.47	□□□□□ -1.69
YBR178W	YBR178W	YLR122C	Q12312	125 aa		4.47	□□□□□ -1.69
YBR178W	YBR178W	DAT1	P13483	248 aa	Known RBP	4.46	□□□□□ -1.7
YBR178W	YBR178W	ARI1	P53111	347 aa	Known RBP	4.46	□□□□□ -1.7
YBR178W	YBR178W	DIT2	P21595	489 aa		4.45	□□□□□ -1.7
YBR178W	YBR178W	ARG8	P18544	423 aa		4.44	□□□□□ -1.7
YBR178W	YBR178W	PSH1	Q12161	406 aa		4.44	□□□□□ -1.7
YBR178W	YBR178W	SHM1	P37292	490 aa	Predicted RBP	4.43	□□□□□ -1.7
YBR178W	YBR178W	PDC6	P26263	563 aa	Known RBP	4.42	□□□□□ -1.7
YBR178W	YBR178W	MSC7	P38694	644 aa		4.42	□□□□□ -1.7
YBR178W	YBR178W	YGR130C	P53278	816 aa		4.42	□□□□□ -1.7
YBR178W	YBR178W	PKH3	Q03306	898 aa	Predicted RBP	4.41	□□□□□ -1.7
YBR178W	YBR178W	MAG2	Q06436	670 aa	Known RBP	4.41	□□□□□ -1.7
YBR178W	YBR178W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
YBR178W	YBR178W	RRM3	P38766	723 aa		4.39	□□□□□ -1.71
YBR178W	YBR178W	GUT2	P32191	649 aa		4.38	□□□□□ -1.71
YBR178W	YBR178W	DSF2	P38213	736 aa		4.38	□□□□□ -1.71
YBR178W	YBR178W	UTR2	P32623	467 aa		4.37	□□□□□ -1.71
YBR178W	YBR178W	ESC8	Q08119	714 aa		4.37	□□□□□ -1.71
YBR178W	YBR178W	SEG2	P34250	1132 aa		4.36	□□□□□ -1.71
YBR178W	YBR178W	SUM1	P46676	1062 aa		4.36	□□□□□ -1.71
YBR178W	YBR178W	CHS2	P14180	963 aa		4.35	□□□□□ -1.71
YBR178W	YBR178W	NAR1	P23503	491 aa	Known RBP	4.35	□□□□□ -1.71
YBR178W	YBR178W	TBS1	P38114	1094 aa		4.35	□□□□□ -1.71
YBR178W	YBR178W	SPT2	P06843	333 aa	Predicted RBP	4.34	□□□□□ -1.71
YBR178W	YBR178W	SFA1	P32771	386 aa		4.34	□□□□□ -1.71
YBR178W	YBR178W	TAF1	P46677	1066 aa		4.34	□□□□□ -1.71
YBR178W	YBR178W	NGR1	P32831	672 aa	Known RBP	4.33	□□□□□ -1.72
YBR178W	YBR178W	CYC7	P00045	113 aa		4.32	□□□□□ -1.72
YBR178W	YBR178W	SAF1	P38352	637 aa		4.32	□□□□□ -1.72
YBR178W	YBR178W	GIS4	Q04233	774 aa		4.32	□□□□□ -1.72
YBR178W	YBR178W	GIP4	P39732	760 aa		4.31	□□□□□ -1.72
YBR178W	YBR178W	ISR1	Q06098	443 aa	Known RBP	4.31	□□□□□ -1.72
YBR178W	YBR178W	RPP1A	P05318	106 aa	Predicted RBP	4.3	□□□□□ -1.72
YBR178W	YBR178W	NIT1	P40447	199 aa		4.29	□□□□□ -1.72
YBR178W	YBR178W	STE20	Q03497	939 aa	Known RBP	4.29	□□□□□ -1.72
YBR178W	YBR178W	RPS31	P05759	152 aa	Known RBP	4.28	□□□□□ -1.72
YBR178W	YBR178W	LRG1	P35688	1017 aa		4.28	□□□□□ -1.72
YBR178W	YBR178W	MCM16	Q12262	181 aa		4.28	□□□□□ -1.72
YBR178W	YBR178W	RSC6	P25632	483 aa		4.27	□□□□□ -1.73
YBR178W	YBR178W	YPT53	P36019	220 aa		4.27	□□□□□ -1.73
YBR178W	YBR178W	TAD3	Q9URQ3	322 aa		4.27	□□□□□ -1.73
YBR178W	YBR178W	LEU1	P07264	779 aa	Known RBP	4.26	□□□□□ -1.73
YBR178W	YBR178W	PRK1	P40494	810 aa		4.26	□□□□□ -1.73
YBR178W	YBR178W	KTR1	P27810	393 aa	Known RBP	4.25	□□□□□ -1.73
YBR178W	YBR178W	RGP1	P16664	663 aa		4.24	□□□□□ -1.73
YBR178W	YBR178W	AKR1	P39010	764 aa		4.24	□□□□□ -1.73
YBR178W	YBR178W	SPO74	P45819	413 aa		4.24	□□□□□ -1.73
YBR178W	YBR178W	NAM7	P30771	971 aa	Known RBP	4.23	□□□□□ -1.73
YBR178W	YBR178W	ALD2	P47771	506 aa		4.23	□□□□□ -1.73
YBR178W	YBR178W	SEA4	P38164	1038 aa		4.22	□□□□□ -1.73
YBR178W	YBR178W	PRP43	P53131	767 aa	Known RBP	4.21	□□□□□ -1.74
YBR178W	YBR178W	ATF2	P53296	535 aa		4.21	□□□□□ -1.74
YBR178W	YBR178W	HEH2	Q03281	663 aa		4.21	□□□□□ -1.74
YBR178W	YBR178W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YBR178W	YBR178W	POL12	P38121	705 aa	Predicted RBP	4.2	□□□□□ -1.74
YBR178W	YBR178W	GAS1	P22146	559 aa	Known RBP	4.19	□□□□□ -1.74
YBR178W	YBR178W	SLX8	P40072	274 aa		4.19	□□□□□ -1.74
YBR178W	YBR178W	ECL1	P48235	211 aa		4.18	□□□□□ -1.74
YBR178W	YBR178W	RAD59	Q12223	238 aa		4.18	□□□□□ -1.74
YBR178W	YBR178W	HAL5	P38970	855 aa	Known RBP	4.17	□□□□□ -1.74
YBR178W	YBR178W	SDH1	Q00711	640 aa		4.17	□□□□□ -1.74
YBR178W	YBR178W	HDA2	Q06629	674 aa		4.14	□□□□□ -1.75
YBR178W	YBR178W	TY1A-NL1	Q12391	440 aa	Known RBP	4.13	□□□□□ -1.75
YBR178W	YBR178W	DFG16	Q99234	619 aa		4.13	□□□□□ -1.75
YBR178W	YBR178W	MAK16	P10962	306 aa	Predicted RBP	4.12	□□□□□ -1.75
YBR178W	YBR178W	YTA6	P40328	754 aa		4.12	□□□□□ -1.75
YBR178W	YBR178W	APL6	P46682	809 aa		4.11	□□□□□ -1.75
YBR178W	YBR178W	YNL165W	P53891	406 aa		4.1	□□□□□ -1.75
YBR178W	YBR178W	EMP47	P43555	445 aa		4.09	□□□□□ -1.75
YBR178W	YBR178W	YPQ2	Q06328	317 aa		4.09	□□□□□ -1.75
YBR178W	YBR178W	ISF1	P32488	338 aa		4.08	□□□□□ -1.76
YBR178W	YBR178W	NCL1	P38205	684 aa	Known RBP	4.08	□□□□□ -1.76
YBR178W	YBR178W	HPC2	Q01448	625 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms