RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C RIM21P48565 533 aa6.07□□□□□ -1.44
RPB5YBR154C SLX8P40072 274 aa6.06□□□□□ -1.44
RPB5YBR154C SLA1P32790 1244 aa6.05□□□□□ -1.44
RPB5YBR154C RPL34BP40525 121 aaKnown RBP6.05□□□□□ -1.44
RPB5YBR154C DIT1P21623 536 aa6.04□□□□□ -1.44
RPB5YBR154C ICP55P40051 511 aa6.04□□□□□ -1.44
RPB5YBR154C YFL034WP43564 1073 aa6.04□□□□□ -1.44
RPB5YBR154C YMR265CQ03508 461 aaKnown RBP6.04□□□□□ -1.44
RPB5YBR154C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
RPB5YBR154C LEO1P38439 464 aa6.03□□□□□ -1.44
RPB5YBR154C JJJ2P46997 583 aa6.03□□□□□ -1.44
RPB5YBR154C PUS1Q12211 544 aaKnown RBP6.03□□□□□ -1.44
RPB5YBR154C TY1A-DR3Q12441 440 aa6.03□□□□□ -1.44
RPB5YBR154C BIM1P40013 344 aa6.02□□□□□ -1.45
RPB5YBR154C AIM9P40053 627 aaKnown RBP6.02□□□□□ -1.45
RPB5YBR154C PHM7Q12252 991 aa6.02□□□□□ -1.45
RPB5YBR154C TIF1P10081 395 aaKnown RBP6.01□□□□□ -1.45
RPB5YBR154C RTG2P32608 588 aaKnown RBP6.01□□□□□ -1.45
RPB5YBR154C KRE33P53914 1056 aaKnown RBP6.01□□□□□ -1.45
RPB5YBR154C YDR461C-AQ2V2P7 80 aa6.01□□□□□ -1.45
RPB5YBR154C RDS2P19541 446 aaKnown RBP6□□□□□ -1.45
RPB5YBR154C IRE1P32361 1115 aa6□□□□□ -1.45
RPB5YBR154C ATG32P40458 529 aa6□□□□□ -1.45
RPB5YBR154C SYT1Q06836 1226 aa6□□□□□ -1.45
RPB5YBR154C AI1P03875 834 aa5.99□□□□□ -1.45
RPB5YBR154C SWI5P08153 709 aa5.99□□□□□ -1.45
RPB5YBR154C ADE12P80210 433 aaKnown RBP5.99□□□□□ -1.45
RPB5YBR154C ENO1P00924 437 aaKnown RBP5.98□□□□□ -1.45
RPB5YBR154C MRX10Q05648 414 aa5.98□□□□□ -1.45
RPB5YBR154C NSG2P53898 299 aa5.97□□□□□ -1.45
RPB5YBR154C RPS6AP0CX37 236 aaKnown RBP5.96□□□□□ -1.46
RPB5YBR154C RPS6BP0CX38 236 aaPredicted RBP5.96□□□□□ -1.46
RPB5YBR154C TSC13Q99190 310 aa5.96□□□□□ -1.46
RPB5YBR154C RPP1AP05318 106 aaPredicted RBP5.95□□□□□ -1.46
RPB5YBR154C FPS1P23900 669 aa5.95□□□□□ -1.46
RPB5YBR154C NTH2P35172 780 aa5.95□□□□□ -1.46
RPB5YBR154C YPQ2Q06328 317 aa5.95□□□□□ -1.46
RPB5YBR154C THI72Q08579 599 aa5.95□□□□□ -1.46
RPB5YBR154C MCM1P11746 286 aa5.94□□□□□ -1.46
RPB5YBR154C PDC6P26263 563 aaKnown RBP5.94□□□□□ -1.46
RPB5YBR154C MDJ1P35191 511 aa5.94□□□□□ -1.46
RPB5YBR154C SIS2P36024 562 aa5.94□□□□□ -1.46
RPB5YBR154C SHM1P37292 490 aaPredicted RBP5.94□□□□□ -1.46
RPB5YBR154C YTA6P40328 754 aa5.94□□□□□ -1.46
RPB5YBR154C PDI1P17967 522 aaKnown RBP5.93□□□□□ -1.46
RPB5YBR154C MRPL16P38064 232 aa5.93□□□□□ -1.46
RPB5YBR154C PEP12P32854 288 aa5.92□□□□□ -1.46
RPB5YBR154C PSH1Q12161 406 aa5.92□□□□□ -1.46
RPB5YBR154C STB3Q12427 513 aa5.91□□□□□ -1.46
RPB5YBR154C CYT1P07143 309 aa5.9□□□□□ -1.46
RPB5YBR154C LSB3P43603 459 aaKnown RBP5.9□□□□□ -1.46
RPB5YBR154C HAP4P14064 554 aa5.89□□□□□ -1.47
RPB5YBR154C YFL066CP43538 392 aa5.89□□□□□ -1.47
RPB5YBR154C RPS31P05759 152 aaKnown RBP5.88□□□□□ -1.47
RPB5YBR154C LEU1P07264 779 aaKnown RBP5.88□□□□□ -1.47
RPB5YBR154C PHO87P25360 923 aa5.88□□□□□ -1.47
RPB5YBR154C KTR7P40504 517 aa5.88□□□□□ -1.47
RPB5YBR154C SPR3P41901 512 aa5.88□□□□□ -1.47
RPB5YBR154C YPR053CQ6Q5F3 151 aa5.88□□□□□ -1.47
RPB5YBR154C GPM1P00950 247 aaKnown RBP5.87□□□□□ -1.47
RPB5YBR154C YNR014WP53719 212 aa5.87□□□□□ -1.47
RPB5YBR154C GAS4Q08271 471 aa5.87□□□□□ -1.47
RPB5YBR154C MET1P36150 593 aa5.86□□□□□ -1.47
RPB5YBR154C ACS2P52910 683 aaKnown RBP5.86□□□□□ -1.47
RPB5YBR154C MLF3P32047 452 aa5.85□□□□□ -1.47
RPB5YBR154C KNS1P32350 737 aaPredicted RBP5.85□□□□□ -1.47
RPB5YBR154C YNL165WP53891 406 aa5.85□□□□□ -1.47
RPB5YBR154C Q0182Q9ZZW1 134 aa5.85□□□□□ -1.47
RPB5YBR154C RGP1P16664 663 aa5.84□□□□□ -1.47
RPB5YBR154C UBP1P25037 809 aa5.84□□□□□ -1.47
RPB5YBR154C SCD5P34758 872 aa5.84□□□□□ -1.47
RPB5YBR154C SBE2P42223 864 aaKnown RBP5.84□□□□□ -1.47
RPB5YBR154C ALD2P47771 506 aa5.84□□□□□ -1.47
RPB5YBR154C YMR187CQ03236 431 aa5.84□□□□□ -1.47
RPB5YBR154C TDA6Q06466 467 aa5.84□□□□□ -1.47
RPB5YBR154C UTP4Q06679 776 aaKnown RBP5.84□□□□□ -1.47
RPB5YBR154C GAL2P13181 574 aa5.82□□□□□ -1.48
RPB5YBR154C PDC5P16467 563 aaKnown RBP5.82□□□□□ -1.48
RPB5YBR154C BOI2P39969 1040 aa5.82□□□□□ -1.48
RPB5YBR154C TY1A-DR2Q03964 440 aaKnown RBP5.82□□□□□ -1.48
RPB5YBR154C MCX1P38323 520 aaPredicted RBP5.81□□□□□ -1.48
RPB5YBR154C CCT8P47079 568 aaKnown RBP5.81□□□□□ -1.48
RPB5YBR154C MTO1P53070 669 aa5.81□□□□□ -1.48
RPB5YBR154C HEH2Q03281 663 aa5.81□□□□□ -1.48
RPB5YBR154C VAN1P23642 535 aa5.8□□□□□ -1.48
RPB5YBR154C NGR1P32831 672 aaKnown RBP5.8□□□□□ -1.48
RPB5YBR154C SKN7P38889 622 aa5.8□□□□□ -1.48
RPB5YBR154C CWH41P53008 833 aa5.8□□□□□ -1.48
RPB5YBR154C DMA2P53924 522 aa5.8□□□□□ -1.48
RPB5YBR154C TGL4P36165 910 aa5.78□□□□□ -1.48
RPB5YBR154C NCL1P38205 684 aaKnown RBP5.78□□□□□ -1.48
RPB5YBR154C ROM1P53046 1155 aa5.78□□□□□ -1.48
RPB5YBR154C TRS33Q99394 268 aa5.78□□□□□ -1.48
RPB5YBR154C MSC7P38694 644 aa5.77□□□□□ -1.49
RPB5YBR154C SKP1P52286 194 aa5.77□□□□□ -1.49
RPB5YBR154C KAP122P32767 1081 aa5.76□□□□□ -1.49
RPB5YBR154C TTI1P36097 1038 aa5.76□□□□□ -1.49
RPB5YBR154C SBP1P10080 294 aaKnown RBP5.75□□□□□ -1.49
RPB5YBR154C HXT5P38695 592 aa5.75□□□□□ -1.49
RPB5YBR154C ECM23Q02710 187 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms