RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CLTCL1P53675 1640 aa22.48■■□□□ 1.19
PHGDH-231ENST00000641939 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
PHGDH-231ENST00000641939 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.47■■□□□ 1.19
PHGDH-231ENST00000641939 KIF1BO60333 1816 aa22.47■■□□□ 1.19
PHGDH-231ENST00000641939 PLEKHG1Q9ULL1 1385 aa22.46■■□□□ 1.19
PHGDH-231ENST00000641939 SETD5Q9C0A6 1442 aa22.46■■□□□ 1.19
PHGDH-231ENST00000641939 BCANQ96GW7 911 aa22.45■■□□□ 1.18
PHGDH-231ENST00000641939 SLC26A8Q96RN1 970 aa22.44■■□□□ 1.18
PHGDH-231ENST00000641939 LRRC7Q96NW7 1537 aa22.43■■□□□ 1.18
PHGDH-231ENST00000641939 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
PHGDH-231ENST00000641939 UBAP1LF5GYI3 381 aa22.43■■□□□ 1.18
PHGDH-231ENST00000641939 NUTM2DQ5VT03 806 aaPredicted RBP22.4■■□□□ 1.18
PHGDH-231ENST00000641939 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
PHGDH-231ENST00000641939 MPHOSPH9Q99550 1183 aa22.39■■□□□ 1.17
PHGDH-231ENST00000641939 XIRP1Q702N8 1843 aaKnown RBP22.38■■□□□ 1.17
PHGDH-231ENST00000641939 KCNA6P17658 529 aa22.38■■□□□ 1.17
PHGDH-231ENST00000641939 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
PHGDH-231ENST00000641939 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
PHGDH-231ENST00000641939 FOXD1Q16676 465 aa22.37■■□□□ 1.17
PHGDH-231ENST00000641939 RAB3GAP2Q9H2M9 1393 aa22.37■■□□□ 1.17
PHGDH-231ENST00000641939 DIP2AQ14689 1571 aa22.36■■□□□ 1.17
PHGDH-231ENST00000641939 NWD1Q149M9 1564 aa22.36■■□□□ 1.17
PHGDH-231ENST00000641939 TOM1O60784 492 aa22.35■■□□□ 1.17
PHGDH-231ENST00000641939 TBX22Q9Y458 520 aa22.35■■□□□ 1.17
PHGDH-231ENST00000641939 ADAMTS13Q76LX8 1427 aa22.34■■□□□ 1.17
PHGDH-231ENST00000641939 NEXMIFQ5QGS0 1516 aa22.34■■□□□ 1.17
PHGDH-231ENST00000641939 NKTRP30414 1462 aaKnown RBP22.33■■□□□ 1.16
PHGDH-231ENST00000641939 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
PHGDH-231ENST00000641939 SETBP1Q9Y6X0 1596 aa22.3■■□□□ 1.16
PHGDH-231ENST00000641939 ALKQ9UM73 1620 aa22.3■■□□□ 1.16
PHGDH-231ENST00000641939 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
PHGDH-231ENST00000641939 PROSER2Q86WR7 435 aaPredicted RBP22.29■■□□□ 1.16
PHGDH-231ENST00000641939 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
PHGDH-231ENST00000641939 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
PHGDH-231ENST00000641939 PIP4K2BP78356 416 aa22.28■■□□□ 1.16
PHGDH-231ENST00000641939 SCAF1Q9H7N4 1312 aaKnown RBP22.28■■□□□ 1.16
PHGDH-231ENST00000641939 PPLO60437 1756 aa22.27■■□□□ 1.16
PHGDH-231ENST00000641939 RPGRIP1LQ68CZ1 1315 aa22.26■■□□□ 1.15
PHGDH-231ENST00000641939 HRCP23327 699 aa22.25■■□□□ 1.15
PHGDH-231ENST00000641939 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
PHGDH-231ENST00000641939 RBM33Q96EV2 1170 aaKnown RBP22.22■■□□□ 1.15
PHGDH-231ENST00000641939 SPATA31E1Q6ZUB1 1445 aa22.21■■□□□ 1.15
PHGDH-231ENST00000641939 PTPRUQ92729 1446 aa22.2■■□□□ 1.14
PHGDH-231ENST00000641939 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
PHGDH-231ENST00000641939 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
PHGDH-231ENST00000641939 XRN1Q8IZH2 1706 aaKnown RBP22.19■■□□□ 1.14
PHGDH-231ENST00000641939 RGL3Q3MIN7 710 aa22.18■■□□□ 1.14
PHGDH-231ENST00000641939 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
PHGDH-231ENST00000641939 NCOA3Q9Y6Q9 1424 aa22.17■■□□□ 1.14
PHGDH-231ENST00000641939 METP08581 1390 aa22.17■■□□□ 1.14
PHGDH-231ENST00000641939 MSH6P52701 1360 aa22.17■■□□□ 1.14
PHGDH-231ENST00000641939 HSPA1LP34931 641 aa22.16■■□□□ 1.14
PHGDH-231ENST00000641939 ANKRD30BQ9BXX2 1392 aa22.14■■□□□ 1.14
PHGDH-231ENST00000641939 C14orf37Q86TY3 774 aa22.12■■□□□ 1.13
PHGDH-231ENST00000641939 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.11■■□□□ 1.13
PHGDH-231ENST00000641939 ADGRF5Q8IZF2 1346 aa22.1■■□□□ 1.13
PHGDH-231ENST00000641939 FAM135BQ49AJ0 1406 aa22.1■■□□□ 1.13
PHGDH-231ENST00000641939 ROBO1Q9Y6N7 1651 aa22.09■■□□□ 1.13
PHGDH-231ENST00000641939 C19orf44Q9H6X5 657 aa22.08■■□□□ 1.13
PHGDH-231ENST00000641939 SLAIN2Q9P270 581 aa22.07■■□□□ 1.12
PHGDH-231ENST00000641939 PIK3C2GO75747 1445 aa22.05■■□□□ 1.12
PHGDH-231ENST00000641939 PTCH1Q13635 1447 aa22.05■■□□□ 1.12
PHGDH-231ENST00000641939 ATF3P18847 181 aa22.04■■□□□ 1.12
PHGDH-231ENST00000641939 CADPS2Q86UW7 1296 aa22.04■■□□□ 1.12
PHGDH-231ENST00000641939 MYOM2P54296 1465 aa22.03■■□□□ 1.12
PHGDH-231ENST00000641939 DCCP43146 1447 aa22.03■■□□□ 1.12
PHGDH-231ENST00000641939 PRAG1Q86YV5 1406 aa22.03■■□□□ 1.12
PHGDH-231ENST00000641939 DISP3Q9P2K9 1392 aa22.02■■□□□ 1.12
PHGDH-231ENST00000641939 NALCNQ8IZF0 1738 aa22.02■■□□□ 1.12
PHGDH-231ENST00000641939 NRXN1Q9ULB1 1477 aa22.01■■□□□ 1.11
PHGDH-231ENST00000641939 ROBO2Q9HCK4 1378 aa22■■□□□ 1.11
PHGDH-231ENST00000641939 ADGRL3Q9HAR2 1447 aa22■■□□□ 1.11
PHGDH-231ENST00000641939 LAMC1P11047 1609 aa21.98■■□□□ 1.11
PHGDH-231ENST00000641939 ASXL1Q8IXJ9 1541 aa21.98■■□□□ 1.11
PHGDH-231ENST00000641939 KNDC1Q76NI1 1749 aa21.97■■□□□ 1.11
PHGDH-231ENST00000641939 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
PHGDH-231ENST00000641939 LRPPRCP42704 1394 aaKnown RBP21.96■■□□□ 1.11
PHGDH-231ENST00000641939 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
PHGDH-231ENST00000641939 C14orf93Q9H972 538 aaKnown RBP21.95■■□□□ 1.1
PHGDH-231ENST00000641939 TECPR2O15040 1411 aa21.94■■□□□ 1.1
PHGDH-231ENST00000641939 MST1RQ04912 1400 aa21.93■■□□□ 1.1
PHGDH-231ENST00000641939 MED1Q15648 1581 aaPredicted RBP21.93■■□□□ 1.1
PHGDH-231ENST00000641939 DCAF11Q8TEB1 546 aa21.93■■□□□ 1.1
PHGDH-231ENST00000641939 ABCC11Q96J66 1382 aa21.93■■□□□ 1.1
PHGDH-231ENST00000641939 STK26Q9P289 416 aa21.93■■□□□ 1.1
PHGDH-231ENST00000641939 YTHDC2Q9H6S0 1430 aaKnown RBP21.92■■□□□ 1.1
PHGDH-231ENST00000641939 CFAP70Q5T0N1 1121 aa21.92■■□□□ 1.1
PHGDH-231ENST00000641939 STAC3Q96MF2 364 aa21.92■■□□□ 1.1
PHGDH-231ENST00000641939 KDM2AQ9Y2K7 1162 aa21.91■■□□□ 1.1
PHGDH-231ENST00000641939 ILDR2Q71H61 639 aa21.9■■□□□ 1.1
PHGDH-231ENST00000641939 AHDC1Q5TGY3 1603 aaPredicted RBP21.9■■□□□ 1.1
PHGDH-231ENST00000641939 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
PHGDH-231ENST00000641939 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-231ENST00000641939 BRINP3Q76B58 766 aa21.89■■□□□ 1.09
PHGDH-231ENST00000641939 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
PHGDH-231ENST00000641939 WAPLQ7Z5K2 1190 aa21.86■■□□□ 1.09
PHGDH-231ENST00000641939 CDC42BPGQ6DT37 1551 aa21.86■■□□□ 1.09
PHGDH-231ENST00000641939 SIRT1Q96EB6 747 aa21.85■■□□□ 1.09
PHGDH-231ENST00000641939 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
PHGDH-231ENST00000641939 C1orf167Q5SNV9 1468 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms