RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
CASC19-227ENST00000641411 HDGFP51858 240 aaKnown RBP12.27□□□□□ -0.45
CASC19-227ENST00000641411 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
CASC19-227ENST00000641411 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
CASC19-227ENST00000641411 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CASC19-227ENST00000641411 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
CASC19-227ENST00000641411 EYA1Q99502 592 aa12.26□□□□□ -0.45
CASC19-227ENST00000641411 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
CASC19-227ENST00000641411 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
CASC19-227ENST00000641411 Q6ZNB5 142 aa12.25□□□□□ -0.45
CASC19-227ENST00000641411 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
CASC19-227ENST00000641411 CFTRP13569 1480 aa12.24□□□□□ -0.45
CASC19-227ENST00000641411 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
CASC19-227ENST00000641411 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
CASC19-227ENST00000641411 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 LCE2BO14633 110 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 RNF40O75150 1001 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 MLLT3P42568 568 aaPredicted RBP12.22□□□□□ -0.45
CASC19-227ENST00000641411 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
CASC19-227ENST00000641411 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
CASC19-227ENST00000641411 PRKD2Q9BZL6 878 aa12.21□□□□□ -0.45
CASC19-227ENST00000641411 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
CASC19-227ENST00000641411 PTGDRQ13258 359 aa12.18□□□□□ -0.46
CASC19-227ENST00000641411 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CASC19-227ENST00000641411 GFRA3O60609 400 aa12.16□□□□□ -0.46
CASC19-227ENST00000641411 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
CASC19-227ENST00000641411 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
CASC19-227ENST00000641411 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
CASC19-227ENST00000641411 PRR14Q9BWN1 585 aa12.14□□□□□ -0.47
CASC19-227ENST00000641411 KIF21BO75037 1637 aa12.13□□□□□ -0.47
CASC19-227ENST00000641411 ZPR1O75312 459 aa12.13□□□□□ -0.47
CASC19-227ENST00000641411 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
CASC19-227ENST00000641411 SOGA1O94964 1423 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 DNAJB2P25686 324 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 COPS2P61201 443 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
CASC19-227ENST00000641411 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
CASC19-227ENST00000641411 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
CASC19-227ENST00000641411 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CASC19-227ENST00000641411 GGCXP38435 758 aa12.09□□□□□ -0.47
CASC19-227ENST00000641411 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
CASC19-227ENST00000641411 CUX1P39880 1505 aa12.08□□□□□ -0.48
CASC19-227ENST00000641411 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CASC19-227ENST00000641411 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.48
CASC19-227ENST00000641411 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
CASC19-227ENST00000641411 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
CASC19-227ENST00000641411 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
CASC19-227ENST00000641411 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
CASC19-227ENST00000641411 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
CASC19-227ENST00000641411 LAMC3Q9Y6N6 1575 aa12.04□□□□□ -0.48
CASC19-227ENST00000641411 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CASC19-227ENST00000641411 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.48
CASC19-227ENST00000641411 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
CASC19-227ENST00000641411 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
CASC19-227ENST00000641411 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
CASC19-227ENST00000641411 NUTM2FA1L443 756 aa12□□□□□ -0.49
CASC19-227ENST00000641411 FCHSD2O94868 740 aa12□□□□□ -0.49
CASC19-227ENST00000641411 FAM161AQ3B820 660 aa12□□□□□ -0.49
CASC19-227ENST00000641411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CASC19-227ENST00000641411 TLL1O43897 1013 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 SEMA3EO15041 775 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 CFHP08603 1231 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
CASC19-227ENST00000641411 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
CASC19-227ENST00000641411 ANKLE1Q8NAG6 615 aa11.97□□□□□ -0.49
CASC19-227ENST00000641411 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
CASC19-227ENST00000641411 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.49
CASC19-227ENST00000641411 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
CASC19-227ENST00000641411 OATP04181 439 aa11.94□□□□□ -0.5
CASC19-227ENST00000641411 SLC19A1P41440 591 aa11.94□□□□□ -0.5
CASC19-227ENST00000641411 HIC1Q14526 733 aa11.92□□□□□ -0.5
CASC19-227ENST00000641411 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
CASC19-227ENST00000641411 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
CASC19-227ENST00000641411 S1PR4O95977 384 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 ADH1BP00325 375 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20EP86478 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20CP86479 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20DP86480 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20BP86481 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20AP86496 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
CASC19-227ENST00000641411 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
CASC19-227ENST00000641411 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
CASC19-227ENST00000641411 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
CASC19-227ENST00000641411 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
CASC19-227ENST00000641411 NR1I2O75469 434 aa11.89□□□□□ -0.51
CASC19-227ENST00000641411 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
CASC19-227ENST00000641411 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
CASC19-227ENST00000641411 GPR37O15354 613 aa11.88□□□□□ -0.51
CASC19-227ENST00000641411 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
CASC19-227ENST00000641411 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms