RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 TRPM2O94759 1503 aa24.63■■□□□ 1.53
RGPD1-205ENST00000641339 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
RGPD1-205ENST00000641339 HDGFP51858 240 aaKnown RBP24.62■■□□□ 1.53
RGPD1-205ENST00000641339 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
RGPD1-205ENST00000641339 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.6■■□□□ 1.53
RGPD1-205ENST00000641339 SLC26A8Q96RN1 970 aa24.6■■□□□ 1.53
RGPD1-205ENST00000641339 NUTM2DQ5VT03 806 aaPredicted RBP24.59■■□□□ 1.53
RGPD1-205ENST00000641339 CLTCL1P53675 1640 aa24.59■■□□□ 1.53
RGPD1-205ENST00000641339 DISP3Q9P2K9 1392 aa24.58■■□□□ 1.53
RGPD1-205ENST00000641339 PLEKHG1Q9ULL1 1385 aa24.58■■□□□ 1.53
RGPD1-205ENST00000641339 CPS1P31327 1500 aa24.58■■□□□ 1.53
RGPD1-205ENST00000641339 PPP1R15AO75807 674 aaPredicted RBP24.56■■□□□ 1.52
RGPD1-205ENST00000641339 HRCP23327 699 aa24.56■■□□□ 1.52
RGPD1-205ENST00000641339 SENP3Q9H4L4 574 aaPredicted RBP24.56■■□□□ 1.52
RGPD1-205ENST00000641339 STRCP1A6NGW2 1772 aa24.54■■□□□ 1.52
RGPD1-205ENST00000641339 ZNF326Q5BKZ1 582 aaKnown RBP24.53■■□□□ 1.52
RGPD1-205ENST00000641339 BCANQ96GW7 911 aa24.53■■□□□ 1.52
RGPD1-205ENST00000641339 KCNA6P17658 529 aa24.5■■□□□ 1.51
RGPD1-205ENST00000641339 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
RGPD1-205ENST00000641339 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
RGPD1-205ENST00000641339 LRRC7Q96NW7 1537 aa24.5■■□□□ 1.51
RGPD1-205ENST00000641339 ADAMTS13Q76LX8 1427 aa24.49■■□□□ 1.51
RGPD1-205ENST00000641339 PIP4K2BP78356 416 aa24.48■■□□□ 1.51
RGPD1-205ENST00000641339 ILDR2Q71H61 639 aa24.48■■□□□ 1.51
RGPD1-205ENST00000641339 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.51
RGPD1-205ENST00000641339 CCDC144AA2RUR9 1427 aa24.44■■□□□ 1.5
RGPD1-205ENST00000641339 KIF1BO60333 1816 aa24.43■■□□□ 1.5
RGPD1-205ENST00000641339 RPGRIP1LQ68CZ1 1315 aa24.42■■□□□ 1.5
RGPD1-205ENST00000641339 SPATA31E1Q6ZUB1 1445 aa24.41■■□□□ 1.5
RGPD1-205ENST00000641339 TOM1O60784 492 aa24.4■■□□□ 1.5
RGPD1-205ENST00000641339 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.49
RGPD1-205ENST00000641339 NWD1Q149M9 1564 aa24.38■■□□□ 1.49
RGPD1-205ENST00000641339 SETBP1Q9Y6X0 1596 aa24.38■■□□□ 1.49
RGPD1-205ENST00000641339 HSPA1LP34931 641 aa24.38■■□□□ 1.49
RGPD1-205ENST00000641339 PROSER2Q86WR7 435 aaPredicted RBP24.38■■□□□ 1.49
RGPD1-205ENST00000641339 RBM33Q96EV2 1170 aaKnown RBP24.38■■□□□ 1.49
RGPD1-205ENST00000641339 PIK3R4Q99570 1358 aa24.38■■□□□ 1.49
RGPD1-205ENST00000641339 ANKRD30BQ9BXX2 1392 aa24.38■■□□□ 1.49
RGPD1-205ENST00000641339 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
RGPD1-205ENST00000641339 DIP2AQ14689 1571 aa24.37■■□□□ 1.49
RGPD1-205ENST00000641339 RGL3Q3MIN7 710 aa24.37■■□□□ 1.49
RGPD1-205ENST00000641339 TMEM94Q12767 1356 aa24.37■■□□□ 1.49
RGPD1-205ENST00000641339 PTPRUQ92729 1446 aa24.36■■□□□ 1.49
RGPD1-205ENST00000641339 ALKQ9UM73 1620 aa24.36■■□□□ 1.49
RGPD1-205ENST00000641339 NKTRP30414 1462 aaKnown RBP24.35■■□□□ 1.49
RGPD1-205ENST00000641339 CHD2O14647 1828 aaKnown RBP24.35■■□□□ 1.49
RGPD1-205ENST00000641339 METP08581 1390 aa24.34■■□□□ 1.49
RGPD1-205ENST00000641339 AMOTL2Q9Y2J4 779 aa24.33■■□□□ 1.49
RGPD1-205ENST00000641339 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.48
RGPD1-205ENST00000641339 ADGRF5Q8IZF2 1346 aa24.31■■□□□ 1.48
RGPD1-205ENST00000641339 PPLO60437 1756 aa24.29■■□□□ 1.48
RGPD1-205ENST00000641339 NCOA3Q9Y6Q9 1424 aa24.25■■□□□ 1.47
RGPD1-205ENST00000641339 TRIM26Q12899 539 aaPredicted RBP24.24■■□□□ 1.47
RGPD1-205ENST00000641339 SOCS7O14512 581 aa24.22■■□□□ 1.47
RGPD1-205ENST00000641339 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
RGPD1-205ENST00000641339 IFT172Q9UG01 1749 aa24.21■■□□□ 1.47
RGPD1-205ENST00000641339 SETD1AO15047 1707 aaKnown RBP24.21■■□□□ 1.47
RGPD1-205ENST00000641339 MED1Q15648 1581 aaPredicted RBP24.2■■□□□ 1.47
RGPD1-205ENST00000641339 MSH6P52701 1360 aa24.19■■□□□ 1.46
RGPD1-205ENST00000641339 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
RGPD1-205ENST00000641339 C19orf44Q9H6X5 657 aa24.18■■□□□ 1.46
RGPD1-205ENST00000641339 NRXN1Q9ULB1 1477 aa24.17■■□□□ 1.46
RGPD1-205ENST00000641339 SLAIN2Q9P270 581 aa24.15■■□□□ 1.46
RGPD1-205ENST00000641339 FAM135BQ49AJ0 1406 aa24.15■■□□□ 1.46
RGPD1-205ENST00000641339 MYOM2P54296 1465 aa24.14■■□□□ 1.46
RGPD1-205ENST00000641339 C14orf37Q86TY3 774 aa24.14■■□□□ 1.45
RGPD1-205ENST00000641339 C14orf93Q9H972 538 aaKnown RBP24.14■■□□□ 1.45
RGPD1-205ENST00000641339 DHX57Q6P158 1386 aaKnown RBP24.14■■□□□ 1.45
RGPD1-205ENST00000641339 ROBO2Q9HCK4 1378 aa24.14■■□□□ 1.45
RGPD1-205ENST00000641339 PRAG1Q86YV5 1406 aa24.13■■□□□ 1.45
RGPD1-205ENST00000641339 TMEM132EQ6IEE7 984 aa24.12■■□□□ 1.45
RGPD1-205ENST00000641339 DCAF11Q8TEB1 546 aa24.12■■□□□ 1.45
RGPD1-205ENST00000641339 CFAP70Q5T0N1 1121 aa24.11■■□□□ 1.45
RGPD1-205ENST00000641339 PTCH1Q13635 1447 aa24.1■■□□□ 1.45
RGPD1-205ENST00000641339 CADPS2Q86UW7 1296 aa24.1■■□□□ 1.45
RGPD1-205ENST00000641339 KDM2AQ9Y2K7 1162 aa24.1■■□□□ 1.45
RGPD1-205ENST00000641339 ATF3P18847 181 aa24.09■■□□□ 1.45
RGPD1-205ENST00000641339 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.09■■□□□ 1.45
RGPD1-205ENST00000641339 ASXL1Q8IXJ9 1541 aa24.09■■□□□ 1.45
RGPD1-205ENST00000641339 STAC3Q96MF2 364 aa24.08■■□□□ 1.45
RGPD1-205ENST00000641339 LRPPRCP42704 1394 aaKnown RBP24.07■■□□□ 1.44
RGPD1-205ENST00000641339 STK26Q9P289 416 aa24.07■■□□□ 1.44
RGPD1-205ENST00000641339 ABCC11Q96J66 1382 aa24.06■■□□□ 1.44
RGPD1-205ENST00000641339 DCCP43146 1447 aa24.05■■□□□ 1.44
RGPD1-205ENST00000641339 ADGRL3Q9HAR2 1447 aa24.05■■□□□ 1.44
RGPD1-205ENST00000641339 TECPR2O15040 1411 aa24.04■■□□□ 1.44
RGPD1-205ENST00000641339 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
RGPD1-205ENST00000641339 YTHDC2Q9H6S0 1430 aaKnown RBP24.03■■□□□ 1.44
RGPD1-205ENST00000641339 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
RGPD1-205ENST00000641339 ROBO1Q9Y6N7 1651 aa24.02■■□□□ 1.44
RGPD1-205ENST00000641339 WAPLQ7Z5K2 1190 aa24.02■■□□□ 1.44
RGPD1-205ENST00000641339 SIRT1Q96EB6 747 aa24■■□□□ 1.43
RGPD1-205ENST00000641339 MST1RQ04912 1400 aa23.99■■□□□ 1.43
RGPD1-205ENST00000641339 NALCNQ8IZF0 1738 aa23.98■■□□□ 1.43
RGPD1-205ENST00000641339 BRINP3Q76B58 766 aa23.98■■□□□ 1.43
RGPD1-205ENST00000641339 PLEKHH1Q9ULM0 1364 aa23.98■■□□□ 1.43
RGPD1-205ENST00000641339 LAMC1P11047 1609 aa23.97■■□□□ 1.43
RGPD1-205ENST00000641339 ADGRB1O14514 1584 aa23.96■■□□□ 1.43
RGPD1-205ENST00000641339 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
RGPD1-205ENST00000641339 L3MBTL2Q969R5 705 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms