RNA–Protein interactions for RNA: ENST00000641056.1

CASC19-208, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,292 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-208ENST00000641056 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
CASC19-208ENST00000641056 HDGFP51858 240 aaKnown RBP12.27□□□□□ -0.45
CASC19-208ENST00000641056 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
CASC19-208ENST00000641056 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
CASC19-208ENST00000641056 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CASC19-208ENST00000641056 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
CASC19-208ENST00000641056 EYA1Q99502 592 aa12.26□□□□□ -0.45
CASC19-208ENST00000641056 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
CASC19-208ENST00000641056 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
CASC19-208ENST00000641056 Q6ZNB5 142 aa12.25□□□□□ -0.45
CASC19-208ENST00000641056 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
CASC19-208ENST00000641056 CFTRP13569 1480 aa12.24□□□□□ -0.45
CASC19-208ENST00000641056 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
CASC19-208ENST00000641056 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
CASC19-208ENST00000641056 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
CASC19-208ENST00000641056 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
CASC19-208ENST00000641056 LCE2BO14633 110 aa12.22□□□□□ -0.45
CASC19-208ENST00000641056 RNF40O75150 1001 aa12.22□□□□□ -0.45
CASC19-208ENST00000641056 MLLT3P42568 568 aaPredicted RBP12.22□□□□□ -0.45
CASC19-208ENST00000641056 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
CASC19-208ENST00000641056 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
CASC19-208ENST00000641056 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
CASC19-208ENST00000641056 PRKD2Q9BZL6 878 aa12.21□□□□□ -0.45
CASC19-208ENST00000641056 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
CASC19-208ENST00000641056 PTGDRQ13258 359 aa12.18□□□□□ -0.46
CASC19-208ENST00000641056 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CASC19-208ENST00000641056 GFRA3O60609 400 aa12.16□□□□□ -0.46
CASC19-208ENST00000641056 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
CASC19-208ENST00000641056 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
CASC19-208ENST00000641056 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
CASC19-208ENST00000641056 PRR14Q9BWN1 585 aa12.14□□□□□ -0.47
CASC19-208ENST00000641056 KIF21BO75037 1637 aa12.13□□□□□ -0.47
CASC19-208ENST00000641056 ZPR1O75312 459 aa12.13□□□□□ -0.47
CASC19-208ENST00000641056 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
CASC19-208ENST00000641056 SOGA1O94964 1423 aa12.12□□□□□ -0.47
CASC19-208ENST00000641056 DNAJB2P25686 324 aa12.12□□□□□ -0.47
CASC19-208ENST00000641056 COPS2P61201 443 aa12.12□□□□□ -0.47
CASC19-208ENST00000641056 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
CASC19-208ENST00000641056 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
CASC19-208ENST00000641056 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
CASC19-208ENST00000641056 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
CASC19-208ENST00000641056 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
CASC19-208ENST00000641056 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CASC19-208ENST00000641056 GGCXP38435 758 aa12.09□□□□□ -0.47
CASC19-208ENST00000641056 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
CASC19-208ENST00000641056 CUX1P39880 1505 aa12.08□□□□□ -0.48
CASC19-208ENST00000641056 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CASC19-208ENST00000641056 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.48
CASC19-208ENST00000641056 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
CASC19-208ENST00000641056 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
CASC19-208ENST00000641056 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
CASC19-208ENST00000641056 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
CASC19-208ENST00000641056 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
CASC19-208ENST00000641056 LAMC3Q9Y6N6 1575 aa12.04□□□□□ -0.48
CASC19-208ENST00000641056 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CASC19-208ENST00000641056 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.48
CASC19-208ENST00000641056 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
CASC19-208ENST00000641056 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
CASC19-208ENST00000641056 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
CASC19-208ENST00000641056 NUTM2FA1L443 756 aa12□□□□□ -0.49
CASC19-208ENST00000641056 FCHSD2O94868 740 aa12□□□□□ -0.49
CASC19-208ENST00000641056 FAM161AQ3B820 660 aa12□□□□□ -0.49
CASC19-208ENST00000641056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CASC19-208ENST00000641056 TLL1O43897 1013 aa11.99□□□□□ -0.49
CASC19-208ENST00000641056 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
CASC19-208ENST00000641056 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
CASC19-208ENST00000641056 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CASC19-208ENST00000641056 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
CASC19-208ENST00000641056 SEMA3EO15041 775 aa11.98□□□□□ -0.49
CASC19-208ENST00000641056 CFHP08603 1231 aa11.98□□□□□ -0.49
CASC19-208ENST00000641056 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CASC19-208ENST00000641056 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
CASC19-208ENST00000641056 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
CASC19-208ENST00000641056 ANKLE1Q8NAG6 615 aa11.97□□□□□ -0.49
CASC19-208ENST00000641056 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
CASC19-208ENST00000641056 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.49
CASC19-208ENST00000641056 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
CASC19-208ENST00000641056 OATP04181 439 aa11.94□□□□□ -0.5
CASC19-208ENST00000641056 SLC19A1P41440 591 aa11.94□□□□□ -0.5
CASC19-208ENST00000641056 HIC1Q14526 733 aa11.92□□□□□ -0.5
CASC19-208ENST00000641056 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
CASC19-208ENST00000641056 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
CASC19-208ENST00000641056 S1PR4O95977 384 aa11.91□□□□□ -0.5
CASC19-208ENST00000641056 ADH1BP00325 375 aa11.91□□□□□ -0.5
CASC19-208ENST00000641056 PRR20EP86478 221 aa11.91□□□□□ -0.5
CASC19-208ENST00000641056 PRR20CP86479 221 aa11.91□□□□□ -0.5
CASC19-208ENST00000641056 PRR20DP86480 221 aa11.91□□□□□ -0.5
CASC19-208ENST00000641056 PRR20BP86481 221 aa11.91□□□□□ -0.5
CASC19-208ENST00000641056 PRR20AP86496 221 aa11.91□□□□□ -0.5
CASC19-208ENST00000641056 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
CASC19-208ENST00000641056 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
CASC19-208ENST00000641056 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
CASC19-208ENST00000641056 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
CASC19-208ENST00000641056 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
CASC19-208ENST00000641056 NR1I2O75469 434 aa11.89□□□□□ -0.51
CASC19-208ENST00000641056 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
CASC19-208ENST00000641056 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
CASC19-208ENST00000641056 GPR37O15354 613 aa11.88□□□□□ -0.51
CASC19-208ENST00000641056 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
CASC19-208ENST00000641056 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms