RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 TMEM131LA2VDJ0 1609 aa30.44■■■□□ 2.46
GABRD-216ENST00000640688 E9PCH4 1651 aa30.42■■■□□ 2.46
GABRD-216ENST00000640688 NWD1Q149M9 1564 aa30.42■■■□□ 2.46
GABRD-216ENST00000640688 PROSER2Q86WR7 435 aaPredicted RBP30.42■■■□□ 2.46
GABRD-216ENST00000640688 BCANQ96GW7 911 aa30.42■■■□□ 2.46
GABRD-216ENST00000640688 PHF23Q9BUL5 403 aaPredicted RBP30.42■■■□□ 2.46
GABRD-216ENST00000640688 RIMS2Q9UQ26 1411 aa30.39■■■□□ 2.46
GABRD-216ENST00000640688 PPARGC1BQ86YN6 1023 aaKnown RBP30.39■■■□□ 2.46
GABRD-216ENST00000640688 FAM135BQ49AJ0 1406 aa30.39■■■□□ 2.45
GABRD-216ENST00000640688 ROCK1Q13464 1354 aa30.38■■■□□ 2.45
GABRD-216ENST00000640688 PLEKHG1Q9ULL1 1385 aa30.37■■■□□ 2.45
GABRD-216ENST00000640688 NKTRP30414 1462 aaKnown RBP30.37■■■□□ 2.45
GABRD-216ENST00000640688 IQGAP3Q86VI3 1631 aa30.36■■■□□ 2.45
GABRD-216ENST00000640688 ROBO1Q9Y6N7 1651 aa30.36■■■□□ 2.45
GABRD-216ENST00000640688 ITGAEP38570 1179 aa30.35■■■□□ 2.45
GABRD-216ENST00000640688 CHD2O14647 1828 aaKnown RBP30.35■■■□□ 2.45
GABRD-216ENST00000640688 CHGAP10645 457 aaKnown RBP30.34■■■□□ 2.45
GABRD-216ENST00000640688 PPP1R15AO75807 674 aaPredicted RBP30.33■■■□□ 2.45
GABRD-216ENST00000640688 NUTM2DQ5VT03 806 aaPredicted RBP30.33■■■□□ 2.45
GABRD-216ENST00000640688 RGS17Q9UGC6 210 aaPredicted RBP30.3■■■□□ 2.44
GABRD-216ENST00000640688 NUP155O75694 1391 aa30.28■■■□□ 2.44
GABRD-216ENST00000640688 ADAMTS13Q76LX8 1427 aa30.26■■■□□ 2.43
GABRD-216ENST00000640688 MSH6P52701 1360 aa30.26■■■□□ 2.43
GABRD-216ENST00000640688 HDGFP51858 240 aaKnown RBP30.25■■■□□ 2.43
GABRD-216ENST00000640688 TBX22Q9Y458 520 aa30.24■■■□□ 2.43
GABRD-216ENST00000640688 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.22■■■□□ 2.43
GABRD-216ENST00000640688 SLAIN2Q9P270 581 aa30.21■■■□□ 2.43
GABRD-216ENST00000640688 PHLPP1O60346 1717 aa30.16■■■□□ 2.42
GABRD-216ENST00000640688 DIP2AQ14689 1571 aa30.16■■■□□ 2.42
GABRD-216ENST00000640688 SPHKAPQ2M3C7 1700 aa30.14■■■□□ 2.42
GABRD-216ENST00000640688 PTPRUQ92729 1446 aa30.13■■■□□ 2.41
GABRD-216ENST00000640688 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.12■■■□□ 2.41
GABRD-216ENST00000640688 NRXN3Q9Y4C0 1643 aa30.11■■■□□ 2.41
GABRD-216ENST00000640688 POTEAQ6S8J7 498 aa30.1■■■□□ 2.41
GABRD-216ENST00000640688 C14orf37Q86TY3 774 aa30.1■■■□□ 2.41
GABRD-216ENST00000640688 NCOA3Q9Y6Q9 1424 aa30.1■■■□□ 2.41
GABRD-216ENST00000640688 TRPM2O94759 1503 aa30.09■■■□□ 2.41
GABRD-216ENST00000640688 PIK3R4Q99570 1358 aa30.09■■■□□ 2.41
GABRD-216ENST00000640688 COL16A1Q07092 1604 aaPredicted RBP30.07■■■□□ 2.4
GABRD-216ENST00000640688 AMOTL2Q9Y2J4 779 aa30.07■■■□□ 2.4
GABRD-216ENST00000640688 C19orf44Q9H6X5 657 aa30.04■■■□□ 2.4
GABRD-216ENST00000640688 RRBP1Q9P2E9 1410 aaKnown RBP30.04■■■□□ 2.4
GABRD-216ENST00000640688 CLTCL1P53675 1640 aa30.03■■■□□ 2.4
GABRD-216ENST00000640688 SETBP1Q9Y6X0 1596 aa30.03■■■□□ 2.4
GABRD-216ENST00000640688 JCADQ9P266 1359 aa30.03■■■□□ 2.4
GABRD-216ENST00000640688 ZNF326Q5BKZ1 582 aaKnown RBP30.01■■■□□ 2.39
GABRD-216ENST00000640688 CADPS2Q86UW7 1296 aa30.01■■■□□ 2.39
GABRD-216ENST00000640688 XRN1Q8IZH2 1706 aaKnown RBP30.01■■■□□ 2.39
GABRD-216ENST00000640688 NAIPQ13075 1403 aa30■■■□□ 2.39
GABRD-216ENST00000640688 ATF3P18847 181 aa30■■■□□ 2.39
GABRD-216ENST00000640688 METP08581 1390 aa29.98■■■□□ 2.39
GABRD-216ENST00000640688 NEXMIFQ5QGS0 1516 aa29.96■■■□□ 2.39
GABRD-216ENST00000640688 AHDC1Q5TGY3 1603 aaPredicted RBP29.96■■■□□ 2.39
GABRD-216ENST00000640688 LRP6O75581 1613 aa29.96■■■□□ 2.39
GABRD-216ENST00000640688 BRINP3Q76B58 766 aa29.93■■■□□ 2.38
GABRD-216ENST00000640688 KIF1BO60333 1816 aa29.92■■■□□ 2.38
GABRD-216ENST00000640688 SETD1AO15047 1707 aaKnown RBP29.89■■■□□ 2.38
GABRD-216ENST00000640688 SHPRHQ149N8 1683 aa29.88■■■□□ 2.37
GABRD-216ENST00000640688 DCCP43146 1447 aa29.88■■■□□ 2.37
GABRD-216ENST00000640688 MST1RQ04912 1400 aa29.87■■■□□ 2.37
GABRD-216ENST00000640688 SPATA31A6Q5VVP1 1343 aa29.86■■■□□ 2.37
GABRD-216ENST00000640688 ASXL1Q8IXJ9 1541 aa29.86■■■□□ 2.37
GABRD-216ENST00000640688 TRIM52Q96A61 297 aa29.85■■■□□ 2.37
GABRD-216ENST00000640688 NALCNQ8IZF0 1738 aa29.84■■■□□ 2.37
GABRD-216ENST00000640688 HFM1A2PYH4 1435 aa29.83■■■□□ 2.37
GABRD-216ENST00000640688 ADGRL3Q9HAR2 1447 aa29.8■■■□□ 2.36
GABRD-216ENST00000640688 MEX3CQ5U5Q3 659 aaKnown RBP29.8■■■□□ 2.36
GABRD-216ENST00000640688 NHSL1Q5SYE7 1610 aa29.8■■■□□ 2.36
GABRD-216ENST00000640688 DDX17Q92841 729 aaKnown RBP29.79■■■□□ 2.36
GABRD-216ENST00000640688 NUTM2BA6NNL0 878 aaPredicted RBP29.76■■■□□ 2.35
GABRD-216ENST00000640688 NUTM2EB1AL46 878 aaPredicted RBP29.76■■■□□ 2.35
GABRD-216ENST00000640688 NUTM2AQ8IVF1 878 aaPredicted RBP29.76■■■□□ 2.35
GABRD-216ENST00000640688 SLC4A1APQ9BWU0 796 aaKnown RBP29.76■■■□□ 2.35
GABRD-216ENST00000640688 SETD5Q9C0A6 1442 aa29.74■■■□□ 2.35
GABRD-216ENST00000640688 FOXD1Q16676 465 aa29.74■■■□□ 2.35
GABRD-216ENST00000640688 PPLO60437 1756 aa29.73■■■□□ 2.35
GABRD-216ENST00000640688 ROBO2Q9HCK4 1378 aa29.73■■■□□ 2.35
GABRD-216ENST00000640688 VGFO15240 615 aaPredicted RBP29.72■■■□□ 2.35
GABRD-216ENST00000640688 ZNF772Q68DY9 489 aaPredicted RBP29.7■■■□□ 2.35
GABRD-216ENST00000640688 PTCH1Q13635 1447 aa29.7■■■□□ 2.34
GABRD-216ENST00000640688 C1orf167Q5SNV9 1468 aa29.68■■■□□ 2.34
GABRD-216ENST00000640688 RPGRIP1LQ68CZ1 1315 aa29.67■■■□□ 2.34
GABRD-216ENST00000640688 LRRC59Q96AG4 307 aaKnown RBP29.66■■■□□ 2.34
GABRD-216ENST00000640688 PNPLA6Q8IY17 1366 aa29.64■■■□□ 2.34
GABRD-216ENST00000640688 ORAI2Q96SN7 254 aa29.63■■■□□ 2.33
GABRD-216ENST00000640688 AFF2P51816 1311 aa29.62■■■□□ 2.33
GABRD-216ENST00000640688 PRAG1Q86YV5 1406 aa29.62■■■□□ 2.33
GABRD-216ENST00000640688 LAMC1P11047 1609 aa29.6■■■□□ 2.33
GABRD-216ENST00000640688 RXRBP28702 533 aa29.59■■■□□ 2.33
GABRD-216ENST00000640688 ADGRF5Q8IZF2 1346 aa29.59■■■□□ 2.33
GABRD-216ENST00000640688 C8orf37Q96NL8 207 aa29.57■■■□□ 2.32
GABRD-216ENST00000640688 RGL3Q3MIN7 710 aa29.56■■■□□ 2.32
GABRD-216ENST00000640688 CCDC144AA2RUR9 1427 aa29.54■■■□□ 2.32
GABRD-216ENST00000640688 SPATA31E1Q6ZUB1 1445 aa29.54■■■□□ 2.32
GABRD-216ENST00000640688 IFT172Q9UG01 1749 aa29.54■■■□□ 2.32
GABRD-216ENST00000640688 UPF1Q92900 1129 aaKnown RBP eCLIP29.54■■■□□ 2.32
GABRD-216ENST00000640688 MPHOSPH9Q99550 1183 aa29.54■■■□□ 2.32
GABRD-216ENST00000640688 SOS2Q07890 1332 aaPredicted RBP29.53■■■□□ 2.32
GABRD-216ENST00000640688 ADAMTS2O95450 1211 aa29.5■■■□□ 2.31
GABRD-216ENST00000640688 CDK12Q9NYV4 1490 aaPredicted RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms