RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 CHGAP10645 457 aaKnown RBP21.83■■□□□ 1.09
HNRNPU-229ENST00000640440 PIP4K2BP78356 416 aa21.83■■□□□ 1.09
HNRNPU-229ENST00000640440 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
HNRNPU-229ENST00000640440 SLC26A8Q96RN1 970 aa21.81■■□□□ 1.08
HNRNPU-229ENST00000640440 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
HNRNPU-229ENST00000640440 BCANQ96GW7 911 aa21.8■■□□□ 1.08
HNRNPU-229ENST00000640440 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
HNRNPU-229ENST00000640440 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
HNRNPU-229ENST00000640440 PLEKHG1Q9ULL1 1385 aa21.77■■□□□ 1.08
HNRNPU-229ENST00000640440 NWD1Q149M9 1564 aa21.77■■□□□ 1.08
HNRNPU-229ENST00000640440 CHD2O14647 1828 aaKnown RBP21.76■■□□□ 1.07
HNRNPU-229ENST00000640440 HDGFP51858 240 aaKnown RBP21.75■■□□□ 1.07
HNRNPU-229ENST00000640440 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
HNRNPU-229ENST00000640440 KCNA6P17658 529 aa21.74■■□□□ 1.07
HNRNPU-229ENST00000640440 NUTM2DQ5VT03 806 aaPredicted RBP21.74■■□□□ 1.07
HNRNPU-229ENST00000640440 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
HNRNPU-229ENST00000640440 HSPA1LP34931 641 aa21.73■■□□□ 1.07
HNRNPU-229ENST00000640440 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.73■■□□□ 1.07
HNRNPU-229ENST00000640440 KIF1BO60333 1816 aa21.73■■□□□ 1.07
HNRNPU-229ENST00000640440 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
HNRNPU-229ENST00000640440 TRPM2O94759 1503 aa21.71■■□□□ 1.07
HNRNPU-229ENST00000640440 TMEM94Q12767 1356 aa21.71■■□□□ 1.07
HNRNPU-229ENST00000640440 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
HNRNPU-229ENST00000640440 DIP2AQ14689 1571 aa21.69■■□□□ 1.06
HNRNPU-229ENST00000640440 PROSER2Q86WR7 435 aaPredicted RBP21.68■■□□□ 1.06
HNRNPU-229ENST00000640440 ADAMTS13Q76LX8 1427 aa21.68■■□□□ 1.06
HNRNPU-229ENST00000640440 RBM33Q96EV2 1170 aaKnown RBP21.67■■□□□ 1.06
HNRNPU-229ENST00000640440 TBX22Q9Y458 520 aa21.65■■□□□ 1.06
HNRNPU-229ENST00000640440 NRXN3Q9Y4C0 1643 aa21.65■■□□□ 1.06
HNRNPU-229ENST00000640440 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.05
HNRNPU-229ENST00000640440 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
HNRNPU-229ENST00000640440 NEXMIFQ5QGS0 1516 aa21.62■■□□□ 1.05
HNRNPU-229ENST00000640440 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
HNRNPU-229ENST00000640440 MED1Q15648 1581 aaPredicted RBP21.6■■□□□ 1.05
HNRNPU-229ENST00000640440 ROBO1Q9Y6N7 1651 aa21.59■■□□□ 1.05
HNRNPU-229ENST00000640440 MSH6P52701 1360 aa21.59■■□□□ 1.05
HNRNPU-229ENST00000640440 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
HNRNPU-229ENST00000640440 ILDR2Q71H61 639 aa21.57■■□□□ 1.04
HNRNPU-229ENST00000640440 XRN1Q8IZH2 1706 aaKnown RBP21.56■■□□□ 1.04
HNRNPU-229ENST00000640440 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
HNRNPU-229ENST00000640440 PTPRUQ92729 1446 aa21.55■■□□□ 1.04
HNRNPU-229ENST00000640440 FOXD1Q16676 465 aa21.55■■□□□ 1.04
HNRNPU-229ENST00000640440 PPLO60437 1756 aa21.55■■□□□ 1.04
HNRNPU-229ENST00000640440 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.54■■□□□ 1.04
HNRNPU-229ENST00000640440 C14orf37Q86TY3 774 aa21.53■■□□□ 1.04
HNRNPU-229ENST00000640440 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
HNRNPU-229ENST00000640440 NCOA3Q9Y6Q9 1424 aa21.51■■□□□ 1.03
HNRNPU-229ENST00000640440 SETD1AO15047 1707 aaKnown RBP21.5■■□□□ 1.03
HNRNPU-229ENST00000640440 METP08581 1390 aa21.49■■□□□ 1.03
HNRNPU-229ENST00000640440 SETD5Q9C0A6 1442 aa21.48■■□□□ 1.03
HNRNPU-229ENST00000640440 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
HNRNPU-229ENST00000640440 PHLPP1O60346 1717 aa21.48■■□□□ 1.03
HNRNPU-229ENST00000640440 SLAIN2Q9P270 581 aa21.47■■□□□ 1.03
HNRNPU-229ENST00000640440 CCDC144AA2RUR9 1427 aa21.46■■□□□ 1.03
HNRNPU-229ENST00000640440 RPGRIP1LQ68CZ1 1315 aa21.45■■□□□ 1.02
HNRNPU-229ENST00000640440 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
HNRNPU-229ENST00000640440 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
HNRNPU-229ENST00000640440 IFT172Q9UG01 1749 aa21.43■■□□□ 1.02
HNRNPU-229ENST00000640440 ATF3P18847 181 aa21.42■■□□□ 1.02
HNRNPU-229ENST00000640440 CADPS2Q86UW7 1296 aa21.42■■□□□ 1.02
HNRNPU-229ENST00000640440 NALCNQ8IZF0 1738 aa21.42■■□□□ 1.02
HNRNPU-229ENST00000640440 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
HNRNPU-229ENST00000640440 SPATA31E1Q6ZUB1 1445 aa21.4■■□□□ 1.02
HNRNPU-229ENST00000640440 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
HNRNPU-229ENST00000640440 COL16A1Q07092 1604 aaPredicted RBP21.39■■□□□ 1.01
HNRNPU-229ENST00000640440 DCCP43146 1447 aa21.38■■□□□ 1.01
HNRNPU-229ENST00000640440 RGL3Q3MIN7 710 aa21.37■■□□□ 1.01
HNRNPU-229ENST00000640440 ADGRL3Q9HAR2 1447 aa21.37■■□□□ 1.01
HNRNPU-229ENST00000640440 SOCS7O14512 581 aa21.36■■□□□ 1.01
HNRNPU-229ENST00000640440 PTCH1Q13635 1447 aa21.36■■□□□ 1.01
HNRNPU-229ENST00000640440 AHDC1Q5TGY3 1603 aaPredicted RBP21.36■■□□□ 1.01
HNRNPU-229ENST00000640440 ANKRD30BQ9BXX2 1392 aa21.34■■□□□ 1.01
HNRNPU-229ENST00000640440 ADGRF5Q8IZF2 1346 aa21.33■■□□□ 1.01
HNRNPU-229ENST00000640440 MST1RQ04912 1400 aa21.33■■□□□ 1.01
HNRNPU-229ENST00000640440 ROBO2Q9HCK4 1378 aa21.33■■□□□ 1
HNRNPU-229ENST00000640440 PRAG1Q86YV5 1406 aa21.31■■□□□ 1
HNRNPU-229ENST00000640440 ASXL1Q8IXJ9 1541 aa21.31■■□□□ 1
HNRNPU-229ENST00000640440 JCADQ9P266 1359 aa21.31■■□□□ 1
HNRNPU-229ENST00000640440 BRINP3Q76B58 766 aa21.3■■□□□ 1
HNRNPU-229ENST00000640440 NHSL1Q5SYE7 1610 aa21.29■■□□□ 1
HNRNPU-229ENST00000640440 PIK3C2GO75747 1445 aa21.28■■□□□ 1
HNRNPU-229ENST00000640440 SHPRHQ149N8 1683 aa21.28■■□□□ 1
HNRNPU-229ENST00000640440 KNDC1Q76NI1 1749 aa21.27■■□□□ 1
HNRNPU-229ENST00000640440 RGS17Q9UGC6 210 aaPredicted RBP21.25■□□□□ 0.99
HNRNPU-229ENST00000640440 MYOM2P54296 1465 aa21.23■□□□□ 0.99
HNRNPU-229ENST00000640440 LAMC1P11047 1609 aa21.22■□□□□ 0.99
HNRNPU-229ENST00000640440 C1orf167Q5SNV9 1468 aa21.22■□□□□ 0.99
HNRNPU-229ENST00000640440 STK26Q9P289 416 aa21.22■□□□□ 0.99
HNRNPU-229ENST00000640440 LRPPRCP42704 1394 aaKnown RBP21.22■□□□□ 0.99
HNRNPU-229ENST00000640440 TECPR2O15040 1411 aa21.21■□□□□ 0.99
HNRNPU-229ENST00000640440 NRXN1Q9ULB1 1477 aa21.21■□□□□ 0.99
HNRNPU-229ENST00000640440 TMEM132EQ6IEE7 984 aa21.21■□□□□ 0.99
HNRNPU-229ENST00000640440 LRP6O75581 1613 aa21.21■□□□□ 0.99
HNRNPU-229ENST00000640440 CDC42BPGQ6DT37 1551 aa21.2■□□□□ 0.98
HNRNPU-229ENST00000640440 HRCP23327 699 aa21.19■□□□□ 0.98
HNRNPU-229ENST00000640440 DDX17Q92841 729 aaKnown RBP21.19■□□□□ 0.98
HNRNPU-229ENST00000640440 SPATA31A6Q5VVP1 1343 aa21.19■□□□□ 0.98
HNRNPU-229ENST00000640440 ABCC11Q96J66 1382 aa21.18■□□□□ 0.98
HNRNPU-229ENST00000640440 YTHDC2Q9H6S0 1430 aaKnown RBP21.18■□□□□ 0.98
HNRNPU-229ENST00000640440 PLEKHH1Q9ULM0 1364 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms