RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CERKQ8TCT0 537 aa32.34■■■□□ 2.77
SCN1B-206ENST00000638536 KIF1BO60333 1816 aa32.34■■■□□ 2.77
SCN1B-206ENST00000638536 HRCP23327 699 aa32.31■■■□□ 2.76
SCN1B-206ENST00000638536 ACIN1Q9UKV3 1341 aaKnown RBP32.31■■■□□ 2.76
SCN1B-206ENST00000638536 STRCP1A6NGW2 1772 aa32.29■■■□□ 2.76
SCN1B-206ENST00000638536 SLC26A8Q96RN1 970 aa32.26■■■□□ 2.75
SCN1B-206ENST00000638536 ZNF326Q5BKZ1 582 aaKnown RBP32.25■■■□□ 2.75
SCN1B-206ENST00000638536 PPP1R15AO75807 674 aaPredicted RBP32.23■■■□□ 2.75
SCN1B-206ENST00000638536 PLEKHG1Q9ULL1 1385 aa32.22■■■□□ 2.75
SCN1B-206ENST00000638536 HDGFP51858 240 aaKnown RBP32.21■■■□□ 2.75
SCN1B-206ENST00000638536 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.21■■■□□ 2.75
SCN1B-206ENST00000638536 CCDC144AA2RUR9 1427 aa32.2■■■□□ 2.75
SCN1B-206ENST00000638536 BCANQ96GW7 911 aa32.2■■■□□ 2.75
SCN1B-206ENST00000638536 NEXMIFQ5QGS0 1516 aa32.2■■■□□ 2.74
SCN1B-206ENST00000638536 ILDR1Q86SU0 546 aaPredicted RBP32.18■■■□□ 2.74
SCN1B-206ENST00000638536 TRIM26Q12899 539 aaPredicted RBP32.17■■■□□ 2.74
SCN1B-206ENST00000638536 ADAMTS13Q76LX8 1427 aa32.14■■■□□ 2.74
SCN1B-206ENST00000638536 ANKRD30BQ9BXX2 1392 aa32.13■■■□□ 2.73
SCN1B-206ENST00000638536 SPATA31E1Q6ZUB1 1445 aa32.12■■■□□ 2.73
SCN1B-206ENST00000638536 CPS1P31327 1500 aa32.12■■■□□ 2.73
SCN1B-206ENST00000638536 NRXN3Q9Y4C0 1643 aa32.12■■■□□ 2.73
SCN1B-206ENST00000638536 FBXO41Q8TF61 875 aa32.11■■■□□ 2.73
SCN1B-206ENST00000638536 RGL3Q3MIN7 710 aa32.11■■■□□ 2.73
SCN1B-206ENST00000638536 PPLO60437 1756 aa32.1■■■□□ 2.73
SCN1B-206ENST00000638536 TBX22Q9Y458 520 aa32.07■■■□□ 2.72
SCN1B-206ENST00000638536 CHD2O14647 1828 aaKnown RBP32.07■■■□□ 2.72
SCN1B-206ENST00000638536 LRRC7Q96NW7 1537 aa32.06■■■□□ 2.72
SCN1B-206ENST00000638536 IQSEC2Q5JU85 1478 aa32.05■■■□□ 2.72
SCN1B-206ENST00000638536 SETBP1Q9Y6X0 1596 aa32.04■■■□□ 2.72
SCN1B-206ENST00000638536 KCNA6P17658 529 aa32.04■■■□□ 2.72
SCN1B-206ENST00000638536 RPGRIP1LQ68CZ1 1315 aa32.04■■■□□ 2.72
SCN1B-206ENST00000638536 XIRP1Q702N8 1843 aaKnown RBP32.03■■■□□ 2.72
SCN1B-206ENST00000638536 IFT172Q9UG01 1749 aa32.02■■■□□ 2.72
SCN1B-206ENST00000638536 DIP2AQ14689 1571 aa32■■■□□ 2.71
SCN1B-206ENST00000638536 NWD1Q149M9 1564 aa32■■■□□ 2.71
SCN1B-206ENST00000638536 VGFO15240 615 aaPredicted RBP32■■■□□ 2.71
SCN1B-206ENST00000638536 RBM33Q96EV2 1170 aaKnown RBP31.99■■■□□ 2.71
SCN1B-206ENST00000638536 ADGRF5Q8IZF2 1346 aa31.97■■■□□ 2.71
SCN1B-206ENST00000638536 PTPRUQ92729 1446 aa31.97■■■□□ 2.71
SCN1B-206ENST00000638536 METP08581 1390 aa31.95■■■□□ 2.71
SCN1B-206ENST00000638536 SETD1AO15047 1707 aaKnown RBP31.94■■■□□ 2.7
SCN1B-206ENST00000638536 TMEM94Q12767 1356 aa31.91■■■□□ 2.7
SCN1B-206ENST00000638536 UBAP1LF5GYI3 381 aa31.91■■■□□ 2.7
SCN1B-206ENST00000638536 PROSER2Q86WR7 435 aaPredicted RBP31.91■■■□□ 2.7
SCN1B-206ENST00000638536 PIK3R4Q99570 1358 aa31.9■■■□□ 2.7
SCN1B-206ENST00000638536 ALKQ9UM73 1620 aa31.9■■■□□ 2.7
SCN1B-206ENST00000638536 NKTRP30414 1462 aaKnown RBP31.9■■■□□ 2.7
SCN1B-206ENST00000638536 AMOTL2Q9Y2J4 779 aa31.89■■■□□ 2.7
SCN1B-206ENST00000638536 DHX57Q6P158 1386 aaKnown RBP31.86■■■□□ 2.69
SCN1B-206ENST00000638536 XRN1Q8IZH2 1706 aaKnown RBP31.85■■■□□ 2.69
SCN1B-206ENST00000638536 PIK3C2GO75747 1445 aa31.82■■■□□ 2.68
SCN1B-206ENST00000638536 MYOM2P54296 1465 aa31.79■■■□□ 2.68
SCN1B-206ENST00000638536 NRXN1Q9ULB1 1477 aa31.79■■■□□ 2.68
SCN1B-206ENST00000638536 TOM1O60784 492 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 DCAF11Q8TEB1 546 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 SIN3AQ96ST3 1273 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 KDM2AQ9Y2K7 1162 aa31.78■■■□□ 2.68
SCN1B-206ENST00000638536 PIP4K2BP78356 416 aa31.77■■■□□ 2.68
SCN1B-206ENST00000638536 PCGF6Q9BYE7 350 aa31.77■■■□□ 2.68
SCN1B-206ENST00000638536 ASXL1Q8IXJ9 1541 aa31.75■■■□□ 2.67
SCN1B-206ENST00000638536 TMEM132EQ6IEE7 984 aa31.74■■■□□ 2.67
SCN1B-206ENST00000638536 CFAP70Q5T0N1 1121 aa31.72■■■□□ 2.67
SCN1B-206ENST00000638536 SCAF1Q9H7N4 1312 aaKnown RBP31.72■■■□□ 2.67
SCN1B-206ENST00000638536 C14orf93Q9H972 538 aaKnown RBP31.71■■■□□ 2.67
SCN1B-206ENST00000638536 ROBO2Q9HCK4 1378 aa31.69■■■□□ 2.66
SCN1B-206ENST00000638536 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.68■■■□□ 2.66
SCN1B-206ENST00000638536 MSH6P52701 1360 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 NCOA3Q9Y6Q9 1424 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 NEUROD1Q13562 356 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 C14orf37Q86TY3 774 aa31.67■■■□□ 2.66
SCN1B-206ENST00000638536 STK26Q9P289 416 aa31.66■■■□□ 2.66
SCN1B-206ENST00000638536 PTCH1Q13635 1447 aa31.63■■■□□ 2.65
SCN1B-206ENST00000638536 PRAG1Q86YV5 1406 aa31.63■■■□□ 2.65
SCN1B-206ENST00000638536 LAMC1P11047 1609 aa31.62■■■□□ 2.65
SCN1B-206ENST00000638536 C19orf44Q9H6X5 657 aa31.62■■■□□ 2.65
SCN1B-206ENST00000638536 NALCNQ8IZF0 1738 aa31.61■■■□□ 2.65
SCN1B-206ENST00000638536 LRPPRCP42704 1394 aaKnown RBP31.6■■■□□ 2.65
SCN1B-206ENST00000638536 YTHDC2Q9H6S0 1430 aaKnown RBP31.6■■■□□ 2.65
SCN1B-206ENST00000638536 L3MBTL2Q969R5 705 aa31.59■■■□□ 2.65
SCN1B-206ENST00000638536 STAC3Q96MF2 364 aa31.58■■■□□ 2.65
SCN1B-206ENST00000638536 KNDC1Q76NI1 1749 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 ABCC11Q96J66 1382 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 ADGRB1O14514 1584 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 HSPA1LP34931 641 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 WAPLQ7Z5K2 1190 aa31.57■■■□□ 2.64
SCN1B-206ENST00000638536 TECPR2O15040 1411 aa31.56■■■□□ 2.64
SCN1B-206ENST00000638536 SLAIN2Q9P270 581 aa31.56■■■□□ 2.64
SCN1B-206ENST00000638536 ADGRL3Q9HAR2 1447 aa31.55■■■□□ 2.64
SCN1B-206ENST00000638536 PLEKHH1Q9ULM0 1364 aa31.54■■■□□ 2.64
SCN1B-206ENST00000638536 ROBO1Q9Y6N7 1651 aa31.53■■■□□ 2.64
SCN1B-206ENST00000638536 ATF3P18847 181 aa31.52■■■□□ 2.64
SCN1B-206ENST00000638536 CADPS2Q86UW7 1296 aa31.51■■■□□ 2.63
SCN1B-206ENST00000638536 FAM135BQ49AJ0 1406 aa31.51■■■□□ 2.63
SCN1B-206ENST00000638536 DCCP43146 1447 aa31.49■■■□□ 2.63
SCN1B-206ENST00000638536 NBPF1Q3BBV0 1214 aa31.46■■■□□ 2.63
SCN1B-206ENST00000638536 MST1RQ04912 1400 aa31.45■■■□□ 2.63
SCN1B-206ENST00000638536 TRAK1Q9UPV9 953 aa31.45■■■□□ 2.62
SCN1B-206ENST00000638536 KIAA1210Q9ULL0 1709 aa31.44■■■□□ 2.62
SCN1B-206ENST00000638536 SAFB2Q14151 953 aaKnown RBP eCLIP31.42■■■□□ 2.62
SCN1B-206ENST00000638536 SIRT1Q96EB6 747 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms