RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 TRPM2O94759 1503 aa21.39■■□□□ 1.02
CACNA1A-249ENST00000637777 NUTM2DQ5VT03 806 aaPredicted RBP21.39■■□□□ 1.01
CACNA1A-249ENST00000637777 CLTCL1P53675 1640 aa21.39■■□□□ 1.01
CACNA1A-249ENST00000637777 KIF1BO60333 1816 aa21.39■■□□□ 1.01
CACNA1A-249ENST00000637777 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.38■■□□□ 1.01
CACNA1A-249ENST00000637777 CPS1P31327 1500 aa21.38■■□□□ 1.01
CACNA1A-249ENST00000637777 RAB3GAP2Q9H2M9 1393 aa21.37■■□□□ 1.01
CACNA1A-249ENST00000637777 FOXD1Q16676 465 aa21.37■■□□□ 1.01
CACNA1A-249ENST00000637777 ACIN1Q9UKV3 1341 aaKnown RBP21.36■■□□□ 1.01
CACNA1A-249ENST00000637777 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
CACNA1A-249ENST00000637777 MPHOSPH9Q99550 1183 aa21.35■■□□□ 1.01
CACNA1A-249ENST00000637777 ZFYVE9O95405 1425 aa21.35■■□□□ 1.01
CACNA1A-249ENST00000637777 IQSEC2Q5JU85 1478 aa21.34■■□□□ 1.01
CACNA1A-249ENST00000637777 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
CACNA1A-249ENST00000637777 UBAP1LF5GYI3 381 aa21.31■■□□□ 1
CACNA1A-249ENST00000637777 STRCP1A6NGW2 1772 aa21.31■■□□□ 1
CACNA1A-249ENST00000637777 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
CACNA1A-249ENST00000637777 SCAF1Q9H7N4 1312 aaKnown RBP21.29■■□□□ 1
CACNA1A-249ENST00000637777 LRRC7Q96NW7 1537 aa21.24■□□□□ 0.99
CACNA1A-249ENST00000637777 KCNA6P17658 529 aa21.22■□□□□ 0.99
CACNA1A-249ENST00000637777 NEXMIFQ5QGS0 1516 aa21.22■□□□□ 0.99
CACNA1A-249ENST00000637777 DIP2AQ14689 1571 aa21.22■□□□□ 0.99
CACNA1A-249ENST00000637777 TOM1O60784 492 aa21.21■□□□□ 0.99
CACNA1A-249ENST00000637777 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
CACNA1A-249ENST00000637777 RGL3Q3MIN7 710 aa21.21■□□□□ 0.99
CACNA1A-249ENST00000637777 PROSER2Q86WR7 435 aaPredicted RBP21.21■□□□□ 0.99
CACNA1A-249ENST00000637777 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
CACNA1A-249ENST00000637777 CHD2O14647 1828 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-249ENST00000637777 ADAMTS13Q76LX8 1427 aa21.18■□□□□ 0.98
CACNA1A-249ENST00000637777 NWD1Q149M9 1564 aa21.18■□□□□ 0.98
CACNA1A-249ENST00000637777 VGFO15240 615 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-249ENST00000637777 RBM33Q96EV2 1170 aaKnown RBP21.17■□□□□ 0.98
CACNA1A-249ENST00000637777 NKTRP30414 1462 aaKnown RBP21.17■□□□□ 0.98
CACNA1A-249ENST00000637777 PPLO60437 1756 aa21.16■□□□□ 0.98
CACNA1A-249ENST00000637777 TMEM94Q12767 1356 aa21.16■□□□□ 0.98
CACNA1A-249ENST00000637777 RPGRIP1LQ68CZ1 1315 aa21.16■□□□□ 0.98
CACNA1A-249ENST00000637777 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
CACNA1A-249ENST00000637777 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
CACNA1A-249ENST00000637777 HRCP23327 699 aa21.15■□□□□ 0.98
CACNA1A-249ENST00000637777 XIRP1Q702N8 1843 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-249ENST00000637777 NRXN3Q9Y4C0 1643 aa21.14■□□□□ 0.97
CACNA1A-249ENST00000637777 PIK3R4Q99570 1358 aa21.12■□□□□ 0.97
CACNA1A-249ENST00000637777 AMOTL2Q9Y2J4 779 aa21.11■□□□□ 0.97
CACNA1A-249ENST00000637777 MSH6P52701 1360 aa21.1■□□□□ 0.97
CACNA1A-249ENST00000637777 SPATA31E1Q6ZUB1 1445 aa21.09■□□□□ 0.97
CACNA1A-249ENST00000637777 METP08581 1390 aa21.07■□□□□ 0.96
CACNA1A-249ENST00000637777 ANKRD30BQ9BXX2 1392 aa21.07■□□□□ 0.96
CACNA1A-249ENST00000637777 IFT172Q9UG01 1749 aa21.07■□□□□ 0.96
CACNA1A-249ENST00000637777 PTPRUQ92729 1446 aa21.05■□□□□ 0.96
CACNA1A-249ENST00000637777 ADGRF5Q8IZF2 1346 aa21.04■□□□□ 0.96
CACNA1A-249ENST00000637777 ALKQ9UM73 1620 aa21.04■□□□□ 0.96
CACNA1A-249ENST00000637777 XRN1Q8IZH2 1706 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-249ENST00000637777 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
CACNA1A-249ENST00000637777 SETD1AO15047 1707 aaKnown RBP21.01■□□□□ 0.95
CACNA1A-249ENST00000637777 HSPA1LP34931 641 aa21■□□□□ 0.95
CACNA1A-249ENST00000637777 ATF3P18847 181 aa20.99■□□□□ 0.95
CACNA1A-249ENST00000637777 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
CACNA1A-249ENST00000637777 NCOA3Q9Y6Q9 1424 aa20.97■□□□□ 0.95
CACNA1A-249ENST00000637777 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.96■□□□□ 0.95
CACNA1A-249ENST00000637777 STK26Q9P289 416 aa20.96■□□□□ 0.95
CACNA1A-249ENST00000637777 PIK3C2GO75747 1445 aa20.95■□□□□ 0.95
CACNA1A-249ENST00000637777 MYOM2P54296 1465 aa20.95■□□□□ 0.94
CACNA1A-249ENST00000637777 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
CACNA1A-249ENST00000637777 C19orf44Q9H6X5 657 aa20.95■□□□□ 0.94
CACNA1A-249ENST00000637777 ROBO1Q9Y6N7 1651 aa20.95■□□□□ 0.94
CACNA1A-249ENST00000637777 CADPS2Q86UW7 1296 aa20.94■□□□□ 0.94
CACNA1A-249ENST00000637777 TMEM132EQ6IEE7 984 aa20.93■□□□□ 0.94
CACNA1A-249ENST00000637777 SLAIN2Q9P270 581 aa20.93■□□□□ 0.94
CACNA1A-249ENST00000637777 PTCH1Q13635 1447 aa20.93■□□□□ 0.94
CACNA1A-249ENST00000637777 LAMC1P11047 1609 aa20.93■□□□□ 0.94
CACNA1A-249ENST00000637777 ROBO2Q9HCK4 1378 aa20.91■□□□□ 0.94
CACNA1A-249ENST00000637777 NALCNQ8IZF0 1738 aa20.9■□□□□ 0.94
CACNA1A-249ENST00000637777 FAM135BQ49AJ0 1406 aa20.89■□□□□ 0.94
CACNA1A-249ENST00000637777 ADGRL3Q9HAR2 1447 aa20.89■□□□□ 0.94
CACNA1A-249ENST00000637777 CFAP70Q5T0N1 1121 aa20.89■□□□□ 0.93
CACNA1A-249ENST00000637777 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
CACNA1A-249ENST00000637777 DCCP43146 1447 aa20.87■□□□□ 0.93
CACNA1A-249ENST00000637777 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
CACNA1A-249ENST00000637777 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-249ENST00000637777 DHX57Q6P158 1386 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-249ENST00000637777 NEUROD1Q13562 356 aa20.86■□□□□ 0.93
CACNA1A-249ENST00000637777 C14orf93Q9H972 538 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-249ENST00000637777 YTHDC2Q9H6S0 1430 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-249ENST00000637777 KNDC1Q76NI1 1749 aa20.85■□□□□ 0.93
CACNA1A-249ENST00000637777 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
CACNA1A-249ENST00000637777 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
CACNA1A-249ENST00000637777 STAC3Q96MF2 364 aa20.83■□□□□ 0.93
CACNA1A-249ENST00000637777 PRAG1Q86YV5 1406 aa20.82■□□□□ 0.92
CACNA1A-249ENST00000637777 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
CACNA1A-249ENST00000637777 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
CACNA1A-249ENST00000637777 ABCC11Q96J66 1382 aa20.81■□□□□ 0.92
CACNA1A-249ENST00000637777 TECPR2O15040 1411 aa20.8■□□□□ 0.92
CACNA1A-249ENST00000637777 SAFB2Q14151 953 aaKnown RBP eCLIP20.8■□□□□ 0.92
CACNA1A-249ENST00000637777 MST1RQ04912 1400 aa20.79■□□□□ 0.92
CACNA1A-249ENST00000637777 POGKQ9P215 609 aa20.79■□□□□ 0.92
CACNA1A-249ENST00000637777 PLEKHH1Q9ULM0 1364 aa20.78■□□□□ 0.92
CACNA1A-249ENST00000637777 BRINP3Q76B58 766 aa20.77■□□□□ 0.92
CACNA1A-249ENST00000637777 TRAK1Q9UPV9 953 aa20.77■□□□□ 0.92
CACNA1A-249ENST00000637777 PRAM1Q96QH2 718 aa20.76■□□□□ 0.91
CACNA1A-249ENST00000637777 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms