RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
SYNGAP1-224ENST00000637721 PPARGC1BQ86YN6 1023 aaKnown RBP19.99■□□□□ 0.79
SYNGAP1-224ENST00000637721 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.99■□□□□ 0.79
SYNGAP1-224ENST00000637721 XIRP1Q702N8 1843 aaKnown RBP19.99■□□□□ 0.79
SYNGAP1-224ENST00000637721 RIMS2Q9UQ26 1411 aa19.98■□□□□ 0.79
SYNGAP1-224ENST00000637721 NWD1Q149M9 1564 aa19.98■□□□□ 0.79
SYNGAP1-224ENST00000637721 NKTRP30414 1462 aaKnown RBP19.98■□□□□ 0.79
SYNGAP1-224ENST00000637721 PPP1R15AO75807 674 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-224ENST00000637721 BCANQ96GW7 911 aa19.96■□□□□ 0.79
SYNGAP1-224ENST00000637721 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
SYNGAP1-224ENST00000637721 TMEM94Q12767 1356 aa19.94■□□□□ 0.78
SYNGAP1-224ENST00000637721 CHGAP10645 457 aaKnown RBP19.93■□□□□ 0.78
SYNGAP1-224ENST00000637721 ILDR2Q71H61 639 aa19.93■□□□□ 0.78
SYNGAP1-224ENST00000637721 CHD2O14647 1828 aaKnown RBP19.92■□□□□ 0.78
SYNGAP1-224ENST00000637721 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
SYNGAP1-224ENST00000637721 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
SYNGAP1-224ENST00000637721 SPHKAPQ2M3C7 1700 aa19.91■□□□□ 0.78
SYNGAP1-224ENST00000637721 PROSER2Q86WR7 435 aaPredicted RBP19.91■□□□□ 0.78
SYNGAP1-224ENST00000637721 PIK3R4Q99570 1358 aa19.9■□□□□ 0.78
SYNGAP1-224ENST00000637721 FAM135BQ49AJ0 1406 aa19.9■□□□□ 0.78
SYNGAP1-224ENST00000637721 SOCS7O14512 581 aa19.89■□□□□ 0.77
SYNGAP1-224ENST00000637721 NAIPQ13075 1403 aa19.89■□□□□ 0.77
SYNGAP1-224ENST00000637721 MED1Q15648 1581 aaPredicted RBP19.89■□□□□ 0.77
SYNGAP1-224ENST00000637721 NCOA3Q9Y6Q9 1424 aa19.88■□□□□ 0.77
SYNGAP1-224ENST00000637721 MSH6P52701 1360 aa19.86■□□□□ 0.77
SYNGAP1-224ENST00000637721 HFM1A2PYH4 1435 aa19.85■□□□□ 0.77
SYNGAP1-224ENST00000637721 ADAMTS13Q76LX8 1427 aa19.85■□□□□ 0.77
SYNGAP1-224ENST00000637721 TRPM2O94759 1503 aa19.83■□□□□ 0.77
SYNGAP1-224ENST00000637721 ROBO1Q9Y6N7 1651 aa19.81■□□□□ 0.76
SYNGAP1-224ENST00000637721 KIF1BO60333 1816 aa19.8■□□□□ 0.76
SYNGAP1-224ENST00000637721 SETBP1Q9Y6X0 1596 aa19.79■□□□□ 0.76
SYNGAP1-224ENST00000637721 ZNF326Q5BKZ1 582 aaKnown RBP19.79■□□□□ 0.76
SYNGAP1-224ENST00000637721 NUTM2DQ5VT03 806 aaPredicted RBP19.79■□□□□ 0.76
SYNGAP1-224ENST00000637721 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
SYNGAP1-224ENST00000637721 CLTCL1P53675 1640 aa19.77■□□□□ 0.76
SYNGAP1-224ENST00000637721 RBM33Q96EV2 1170 aaKnown RBP19.77■□□□□ 0.76
SYNGAP1-224ENST00000637721 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
SYNGAP1-224ENST00000637721 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
SYNGAP1-224ENST00000637721 SLAIN2Q9P270 581 aa19.76■□□□□ 0.75
SYNGAP1-224ENST00000637721 NRXN3Q9Y4C0 1643 aa19.76■□□□□ 0.75
SYNGAP1-224ENST00000637721 CADPS2Q86UW7 1296 aa19.74■□□□□ 0.75
SYNGAP1-224ENST00000637721 C19orf44Q9H6X5 657 aa19.74■□□□□ 0.75
SYNGAP1-224ENST00000637721 AMOTL2Q9Y2J4 779 aa19.74■□□□□ 0.75
SYNGAP1-224ENST00000637721 NEXMIFQ5QGS0 1516 aa19.74■□□□□ 0.75
SYNGAP1-224ENST00000637721 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
SYNGAP1-224ENST00000637721 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
SYNGAP1-224ENST00000637721 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
SYNGAP1-224ENST00000637721 XRN1Q8IZH2 1706 aaKnown RBP19.71■□□□□ 0.75
SYNGAP1-224ENST00000637721 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.71■□□□□ 0.75
SYNGAP1-224ENST00000637721 PTPRUQ92729 1446 aa19.71■□□□□ 0.75
SYNGAP1-224ENST00000637721 ATF3P18847 181 aa19.71■□□□□ 0.75
SYNGAP1-224ENST00000637721 DCCP43146 1447 aa19.7■□□□□ 0.74
SYNGAP1-224ENST00000637721 RPGRIP1LQ68CZ1 1315 aa19.7■□□□□ 0.74
SYNGAP1-224ENST00000637721 PHLPP1O60346 1717 aa19.69■□□□□ 0.74
SYNGAP1-224ENST00000637721 VGFO15240 615 aaPredicted RBP19.69■□□□□ 0.74
SYNGAP1-224ENST00000637721 JCADQ9P266 1359 aa19.66■□□□□ 0.74
SYNGAP1-224ENST00000637721 METP08581 1390 aa19.65■□□□□ 0.74
SYNGAP1-224ENST00000637721 AHDC1Q5TGY3 1603 aaPredicted RBP19.64■□□□□ 0.73
SYNGAP1-224ENST00000637721 COL16A1Q07092 1604 aaPredicted RBP19.63■□□□□ 0.73
SYNGAP1-224ENST00000637721 PPLO60437 1756 aa19.62■□□□□ 0.73
SYNGAP1-224ENST00000637721 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
SYNGAP1-224ENST00000637721 PTCH1Q13635 1447 aa19.6■□□□□ 0.73
SYNGAP1-224ENST00000637721 PRAG1Q86YV5 1406 aa19.6■□□□□ 0.73
SYNGAP1-224ENST00000637721 SETD1AO15047 1707 aaKnown RBP19.6■□□□□ 0.73
SYNGAP1-224ENST00000637721 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
SYNGAP1-224ENST00000637721 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
SYNGAP1-224ENST00000637721 RGS17Q9UGC6 210 aaPredicted RBP19.58■□□□□ 0.72
SYNGAP1-224ENST00000637721 SPATA31A6Q5VVP1 1343 aa19.57■□□□□ 0.72
SYNGAP1-224ENST00000637721 MST1RQ04912 1400 aa19.57■□□□□ 0.72
SYNGAP1-224ENST00000637721 SHPRHQ149N8 1683 aa19.56■□□□□ 0.72
SYNGAP1-224ENST00000637721 BRINP3Q76B58 766 aa19.56■□□□□ 0.72
SYNGAP1-224ENST00000637721 ASXL1Q8IXJ9 1541 aa19.55■□□□□ 0.72
SYNGAP1-224ENST00000637721 NALCNQ8IZF0 1738 aa19.54■□□□□ 0.72
SYNGAP1-224ENST00000637721 SETD5Q9C0A6 1442 aa19.54■□□□□ 0.72
SYNGAP1-224ENST00000637721 FOXD1Q16676 465 aa19.54■□□□□ 0.72
SYNGAP1-224ENST00000637721 ANKRD30BQ9BXX2 1392 aa19.54■□□□□ 0.72
SYNGAP1-224ENST00000637721 SPATA31E1Q6ZUB1 1445 aa19.53■□□□□ 0.72
SYNGAP1-224ENST00000637721 NHSL1Q5SYE7 1610 aa19.53■□□□□ 0.72
SYNGAP1-224ENST00000637721 IFT172Q9UG01 1749 aa19.51■□□□□ 0.71
SYNGAP1-224ENST00000637721 ROBO2Q9HCK4 1378 aa19.49■□□□□ 0.71
SYNGAP1-224ENST00000637721 LRRC59Q96AG4 307 aaKnown RBP19.48■□□□□ 0.71
SYNGAP1-224ENST00000637721 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
SYNGAP1-224ENST00000637721 POTEAQ6S8J7 498 aa19.47■□□□□ 0.71
SYNGAP1-224ENST00000637721 C1orf167Q5SNV9 1468 aa19.47■□□□□ 0.71
SYNGAP1-224ENST00000637721 MEX3CQ5U5Q3 659 aaKnown RBP19.46■□□□□ 0.71
SYNGAP1-224ENST00000637721 LRP6O75581 1613 aa19.46■□□□□ 0.71
SYNGAP1-224ENST00000637721 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
SYNGAP1-224ENST00000637721 TECPR2O15040 1411 aa19.45■□□□□ 0.7
SYNGAP1-224ENST00000637721 LAMC1P11047 1609 aa19.45■□□□□ 0.7
SYNGAP1-224ENST00000637721 ZNF772Q68DY9 489 aaPredicted RBP19.45■□□□□ 0.7
SYNGAP1-224ENST00000637721 PIK3C2GO75747 1445 aa19.44■□□□□ 0.7
SYNGAP1-224ENST00000637721 RAB3GAP2Q9H2M9 1393 aa19.44■□□□□ 0.7
SYNGAP1-224ENST00000637721 KNDC1Q76NI1 1749 aa19.43■□□□□ 0.7
SYNGAP1-224ENST00000637721 CDC42BPGQ6DT37 1551 aa19.43■□□□□ 0.7
SYNGAP1-224ENST00000637721 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
SYNGAP1-224ENST00000637721 ABCC11Q96J66 1382 aa19.42■□□□□ 0.7
SYNGAP1-224ENST00000637721 MYOM2P54296 1465 aa19.41■□□□□ 0.7
SYNGAP1-224ENST00000637721 HRCP23327 699 aa19.4■□□□□ 0.7
SYNGAP1-224ENST00000637721 SIRT1Q96EB6 747 aa19.39■□□□□ 0.69
SYNGAP1-224ENST00000637721 NRXN1Q9ULB1 1477 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms