RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 NASPP49321 788 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-242ENST00000637485 TOP2BQ02880 1626 aa11.85□□□□□ -0.51
CACNA1A-242ENST00000637485 EFCAB5A4FU69 1503 aa11.84□□□□□ -0.51
CACNA1A-242ENST00000637485 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-242ENST00000637485 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
CACNA1A-242ENST00000637485 CHMP4CQ96CF2 233 aa11.84□□□□□ -0.51
CACNA1A-242ENST00000637485 ITPRIPQ8IWB1 547 aa11.83□□□□□ -0.51
CACNA1A-242ENST00000637485 CCDC173Q0VFZ6 552 aa11.83□□□□□ -0.52
CACNA1A-242ENST00000637485 USP47Q96K76 1375 aa11.83□□□□□ -0.52
CACNA1A-242ENST00000637485 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-242ENST00000637485 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-242ENST00000637485 PLCD4Q9BRC7 762 aa11.82□□□□□ -0.52
CACNA1A-242ENST00000637485 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-242ENST00000637485 ST20-MTHFSA0A0A6YYL1 179 aa11.82□□□□□ -0.52
CACNA1A-242ENST00000637485 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 CREBRFQ8IUR6 639 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 DYDC1Q8WWB3 177 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 KIAA0754O94854 1291 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 ZRSR2Q15696 482 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 GIMAP7Q8NHV1 300 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 PRKRIP1Q9H875 184 aaPredicted RBP11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 INCENPQ9NQS7 918 aa11.81□□□□□ -0.52
CACNA1A-242ENST00000637485 NUCB2P80303 420 aa11.8□□□□□ -0.52
CACNA1A-242ENST00000637485 PRXQ9BXM0 1461 aa11.8□□□□□ -0.52
CACNA1A-242ENST00000637485 GOLGA6L7A0A1B0GV03 622 aa11.8□□□□□ -0.52
CACNA1A-242ENST00000637485 LMOD3Q0VAK6 560 aa11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 PDCL2Q8N4E4 241 aa11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 FOXD4L4Q8WXT5 416 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 NEXNQ0ZGT2 675 aa11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 APBB1O00213 710 aa11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 PRM3Q9NNZ6 103 aa11.79□□□□□ -0.52
CACNA1A-242ENST00000637485 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 PANK3Q9H999 370 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 SOX12O15370 315 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 CENPJQ9HC77 1338 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 PES1O00541 588 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 CCP110O43303 1012 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 ANKRD20A12PQ8NF67 263 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
CACNA1A-242ENST00000637485 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.52
CACNA1A-242ENST00000637485 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.52
CACNA1A-242ENST00000637485 CAVIN1Q6NZI2 390 aaKnown RBP11.77□□□□□ -0.52
CACNA1A-242ENST00000637485 H3BQV1 296 aa11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 CALCOCO1Q9P1Z2 691 aa11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 UQCRHLA0A096LP55 91 aa11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 UQCRHP07919 91 aa11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 MIA2Q96PC5 1412 aa11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 EHBP1L1Q8N3D4 1523 aa11.77□□□□□ -0.53
CACNA1A-242ENST00000637485 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
CACNA1A-242ENST00000637485 NGEFQ8N5V2 710 aa11.76□□□□□ -0.53
CACNA1A-242ENST00000637485 SMC4Q9NTJ3 1288 aa11.76□□□□□ -0.53
CACNA1A-242ENST00000637485 EVC2Q86UK5 1308 aa11.75□□□□□ -0.53
CACNA1A-242ENST00000637485 SASS6Q6UVJ0 657 aa11.75□□□□□ -0.53
CACNA1A-242ENST00000637485 CGNL1Q0VF96 1302 aa11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 LETM1O95202 739 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 MEX3CQ5U5Q3 659 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 ANKRD50Q9ULJ7 1429 aa11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-242ENST00000637485 TRAK2O60296 914 aa11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 MAPK8IP2Q13387 824 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 CCDC146Q8IYE0 955 aa11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 STK31Q9BXU1 1019 aa11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 CCDC7Q96M83 1385 aa11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 HOOK1Q9UJC3 728 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 TOPBP1Q92547 1522 aa11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 AXDND1Q5T1B0 1012 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 FAM184AQ8NB25 1140 aa11.73□□□□□ -0.53
CACNA1A-242ENST00000637485 E9PSI1 815 aa11.72□□□□□ -0.53
CACNA1A-242ENST00000637485 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-242ENST00000637485 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
CACNA1A-242ENST00000637485 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-242ENST00000637485 ESPNB1AK53 854 aa11.72□□□□□ -0.53
CACNA1A-242ENST00000637485 MYO6Q9UM54 1294 aa11.72□□□□□ -0.53
CACNA1A-242ENST00000637485 CCDC112Q8NEF3 446 aa11.71□□□□□ -0.53
CACNA1A-242ENST00000637485 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.53
CACNA1A-242ENST00000637485 HECW1Q76N89 1606 aa11.71□□□□□ -0.53
CACNA1A-242ENST00000637485 CT47B1P0C2W7 299 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-242ENST00000637485 SYNJ2O15056 1496 aa11.71□□□□□ -0.53
CACNA1A-242ENST00000637485 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
CACNA1A-242ENST00000637485 ERLIN1O75477 346 aa11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 MBD3O95983 291 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms