RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
CTSD-210ENST00000637381 ITGAEP38570 1179 aa19.46■□□□□ 0.71
CTSD-210ENST00000637381 SLC26A8Q96RN1 970 aa19.46■□□□□ 0.71
CTSD-210ENST00000637381 NWD1Q149M9 1564 aa19.45■□□□□ 0.7
CTSD-210ENST00000637381 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
CTSD-210ENST00000637381 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
CTSD-210ENST00000637381 RIMS2Q9UQ26 1411 aa19.44■□□□□ 0.7
CTSD-210ENST00000637381 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
CTSD-210ENST00000637381 NKTRP30414 1462 aaKnown RBP19.41■□□□□ 0.7
CTSD-210ENST00000637381 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.41■□□□□ 0.7
CTSD-210ENST00000637381 TBX22Q9Y458 520 aa19.4■□□□□ 0.7
CTSD-210ENST00000637381 TMEM94Q12767 1356 aa19.4■□□□□ 0.7
CTSD-210ENST00000637381 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.69
CTSD-210ENST00000637381 NAIPQ13075 1403 aa19.38■□□□□ 0.69
CTSD-210ENST00000637381 PROSER2Q86WR7 435 aaPredicted RBP19.38■□□□□ 0.69
CTSD-210ENST00000637381 MED1Q15648 1581 aaPredicted RBP19.37■□□□□ 0.69
CTSD-210ENST00000637381 FAM135BQ49AJ0 1406 aa19.37■□□□□ 0.69
CTSD-210ENST00000637381 SOCS7O14512 581 aa19.36■□□□□ 0.69
CTSD-210ENST00000637381 ADAMTS13Q76LX8 1427 aa19.35■□□□□ 0.69
CTSD-210ENST00000637381 PPP1R15AO75807 674 aaPredicted RBP19.35■□□□□ 0.69
CTSD-210ENST00000637381 BCANQ96GW7 911 aa19.35■□□□□ 0.69
CTSD-210ENST00000637381 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
CTSD-210ENST00000637381 CHGAP10645 457 aaKnown RBP19.34■□□□□ 0.69
CTSD-210ENST00000637381 PIK3R4Q99570 1358 aa19.33■□□□□ 0.69
CTSD-210ENST00000637381 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.68
CTSD-210ENST00000637381 RBM33Q96EV2 1170 aaKnown RBP19.31■□□□□ 0.68
CTSD-210ENST00000637381 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
CTSD-210ENST00000637381 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
CTSD-210ENST00000637381 ROBO1Q9Y6N7 1651 aa19.29■□□□□ 0.68
CTSD-210ENST00000637381 TRPM2O94759 1503 aa19.29■□□□□ 0.68
CTSD-210ENST00000637381 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
CTSD-210ENST00000637381 MSH6P52701 1360 aa19.28■□□□□ 0.68
CTSD-210ENST00000637381 CLTCL1P53675 1640 aa19.28■□□□□ 0.68
CTSD-210ENST00000637381 NRXN3Q9Y4C0 1643 aa19.28■□□□□ 0.68
CTSD-210ENST00000637381 SETBP1Q9Y6X0 1596 aa19.27■□□□□ 0.68
CTSD-210ENST00000637381 KIF1BO60333 1816 aa19.25■□□□□ 0.67
CTSD-210ENST00000637381 SLAIN2Q9P270 581 aa19.25■□□□□ 0.67
CTSD-210ENST00000637381 PTPRUQ92729 1446 aa19.25■□□□□ 0.67
CTSD-210ENST00000637381 NEXMIFQ5QGS0 1516 aa19.23■□□□□ 0.67
CTSD-210ENST00000637381 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.22■□□□□ 0.67
CTSD-210ENST00000637381 XRN1Q8IZH2 1706 aaKnown RBP19.22■□□□□ 0.67
CTSD-210ENST00000637381 C19orf44Q9H6X5 657 aa19.21■□□□□ 0.67
CTSD-210ENST00000637381 AMOTL2Q9Y2J4 779 aa19.21■□□□□ 0.67
CTSD-210ENST00000637381 ZNF326Q5BKZ1 582 aaKnown RBP19.2■□□□□ 0.66
CTSD-210ENST00000637381 TRIM52Q96A61 297 aa19.18■□□□□ 0.66
CTSD-210ENST00000637381 PHLPP1O60346 1717 aa19.17■□□□□ 0.66
CTSD-210ENST00000637381 CADPS2Q86UW7 1296 aa19.17■□□□□ 0.66
CTSD-210ENST00000637381 SLC4A1APQ9BWU0 796 aaKnown RBP19.17■□□□□ 0.66
CTSD-210ENST00000637381 METP08581 1390 aa19.17■□□□□ 0.66
CTSD-210ENST00000637381 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
CTSD-210ENST00000637381 RGS17Q9UGC6 210 aaPredicted RBP19.15■□□□□ 0.66
CTSD-210ENST00000637381 DCCP43146 1447 aa19.15■□□□□ 0.66
CTSD-210ENST00000637381 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.65
CTSD-210ENST00000637381 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
CTSD-210ENST00000637381 VGFO15240 615 aaPredicted RBP19.13■□□□□ 0.65
CTSD-210ENST00000637381 ATF3P18847 181 aa19.13■□□□□ 0.65
CTSD-210ENST00000637381 C14orf37Q86TY3 774 aa19.13■□□□□ 0.65
CTSD-210ENST00000637381 COL16A1Q07092 1604 aaPredicted RBP19.13■□□□□ 0.65
CTSD-210ENST00000637381 PPLO60437 1756 aa19.12■□□□□ 0.65
CTSD-210ENST00000637381 AHDC1Q5TGY3 1603 aaPredicted RBP19.11■□□□□ 0.65
CTSD-210ENST00000637381 JCADQ9P266 1359 aa19.09■□□□□ 0.65
CTSD-210ENST00000637381 PRAG1Q86YV5 1406 aa19.08■□□□□ 0.65
CTSD-210ENST00000637381 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.65
CTSD-210ENST00000637381 BRINP3Q76B58 766 aa19.07■□□□□ 0.64
CTSD-210ENST00000637381 MPHOSPH9Q99550 1183 aa19.07■□□□□ 0.64
CTSD-210ENST00000637381 FOXD1Q16676 465 aa19.06■□□□□ 0.64
CTSD-210ENST00000637381 MST1RQ04912 1400 aa19.06■□□□□ 0.64
CTSD-210ENST00000637381 ADGRL3Q9HAR2 1447 aa19.06■□□□□ 0.64
CTSD-210ENST00000637381 NALCNQ8IZF0 1738 aa19.05■□□□□ 0.64
CTSD-210ENST00000637381 SPATA31E1Q6ZUB1 1445 aa19.05■□□□□ 0.64
CTSD-210ENST00000637381 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
CTSD-210ENST00000637381 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
CTSD-210ENST00000637381 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
CTSD-210ENST00000637381 NHSL1Q5SYE7 1610 aa19.03■□□□□ 0.64
CTSD-210ENST00000637381 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
CTSD-210ENST00000637381 CCDC144AA2RUR9 1427 aa19.02■□□□□ 0.64
CTSD-210ENST00000637381 ASXL1Q8IXJ9 1541 aa19.02■□□□□ 0.64
CTSD-210ENST00000637381 POTEAQ6S8J7 498 aa19.01■□□□□ 0.63
CTSD-210ENST00000637381 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
CTSD-210ENST00000637381 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
CTSD-210ENST00000637381 LAMC1P11047 1609 aa18.99■□□□□ 0.63
CTSD-210ENST00000637381 ANKRD30BQ9BXX2 1392 aa18.98■□□□□ 0.63
CTSD-210ENST00000637381 LRP6O75581 1613 aa18.98■□□□□ 0.63
CTSD-210ENST00000637381 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
CTSD-210ENST00000637381 C1orf167Q5SNV9 1468 aa18.96■□□□□ 0.63
CTSD-210ENST00000637381 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
CTSD-210ENST00000637381 TECPR2O15040 1411 aa18.93■□□□□ 0.62
CTSD-210ENST00000637381 LRRC59Q96AG4 307 aaKnown RBP18.93■□□□□ 0.62
CTSD-210ENST00000637381 PIK3C2GO75747 1445 aa18.92■□□□□ 0.62
CTSD-210ENST00000637381 RAB3GAP2Q9H2M9 1393 aa18.92■□□□□ 0.62
CTSD-210ENST00000637381 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
CTSD-210ENST00000637381 KNDC1Q76NI1 1749 aa18.91■□□□□ 0.62
CTSD-210ENST00000637381 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
CTSD-210ENST00000637381 NRXN1Q9ULB1 1477 aa18.9■□□□□ 0.62
CTSD-210ENST00000637381 CDC42BPGQ6DT37 1551 aa18.89■□□□□ 0.62
CTSD-210ENST00000637381 HRCP23327 699 aa18.88■□□□□ 0.61
CTSD-210ENST00000637381 DDX17Q92841 729 aaKnown RBP18.88■□□□□ 0.61
CTSD-210ENST00000637381 ORAI2Q96SN7 254 aa18.88■□□□□ 0.61
CTSD-210ENST00000637381 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
CTSD-210ENST00000637381 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms