RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 SLC4A1APQ9BWU0 796 aaKnown RBP30.81■■■□□ 2.52
CHRNA7-220ENST00000636850 PPP1R15AO75807 674 aaPredicted RBP30.78■■■□□ 2.52
CHRNA7-220ENST00000636850 SETD5Q9C0A6 1442 aa30.77■■■□□ 2.52
CHRNA7-220ENST00000636850 PLEKHG1Q9ULL1 1385 aa30.77■■■□□ 2.52
CHRNA7-220ENST00000636850 HDGFP51858 240 aaKnown RBP30.75■■■□□ 2.51
CHRNA7-220ENST00000636850 LRRC7Q96NW7 1537 aa30.74■■■□□ 2.51
CHRNA7-220ENST00000636850 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.73■■■□□ 2.51
CHRNA7-220ENST00000636850 BCANQ96GW7 911 aa30.73■■■□□ 2.51
CHRNA7-220ENST00000636850 XIRP1Q702N8 1843 aaKnown RBP30.73■■■□□ 2.51
CHRNA7-220ENST00000636850 SLC26A8Q96RN1 970 aa30.72■■■□□ 2.51
CHRNA7-220ENST00000636850 NWD1Q149M9 1564 aa30.71■■■□□ 2.51
CHRNA7-220ENST00000636850 SENP3Q9H4L4 574 aaPredicted RBP30.7■■■□□ 2.51
CHRNA7-220ENST00000636850 DIP2AQ14689 1571 aa30.7■■■□□ 2.5
CHRNA7-220ENST00000636850 UBAP1LF5GYI3 381 aa30.69■■■□□ 2.5
CHRNA7-220ENST00000636850 CHD2O14647 1828 aaKnown RBP30.68■■■□□ 2.5
CHRNA7-220ENST00000636850 NUTM2DQ5VT03 806 aaPredicted RBP30.68■■■□□ 2.5
CHRNA7-220ENST00000636850 RAB3GAP2Q9H2M9 1393 aa30.67■■■□□ 2.5
CHRNA7-220ENST00000636850 ACIN1Q9UKV3 1341 aaKnown RBP30.67■■■□□ 2.5
CHRNA7-220ENST00000636850 NEXMIFQ5QGS0 1516 aa30.67■■■□□ 2.5
CHRNA7-220ENST00000636850 ZNF326Q5BKZ1 582 aaKnown RBP30.65■■■□□ 2.5
CHRNA7-220ENST00000636850 FOXD1Q16676 465 aa30.64■■■□□ 2.5
CHRNA7-220ENST00000636850 MPHOSPH9Q99550 1183 aa30.64■■■□□ 2.5
CHRNA7-220ENST00000636850 NKTRP30414 1462 aaKnown RBP30.63■■■□□ 2.49
CHRNA7-220ENST00000636850 NRXN3Q9Y4C0 1643 aa30.63■■■□□ 2.49
CHRNA7-220ENST00000636850 ADAMTS13Q76LX8 1427 aa30.63■■■□□ 2.49
CHRNA7-220ENST00000636850 SETBP1Q9Y6X0 1596 aa30.62■■■□□ 2.49
CHRNA7-220ENST00000636850 KCNA6P17658 529 aa30.6■■■□□ 2.49
CHRNA7-220ENST00000636850 PPLO60437 1756 aa30.59■■■□□ 2.49
CHRNA7-220ENST00000636850 ALKQ9UM73 1620 aa30.59■■■□□ 2.49
CHRNA7-220ENST00000636850 CCDC144AA2RUR9 1427 aa30.58■■■□□ 2.49
CHRNA7-220ENST00000636850 TOM1O60784 492 aa30.56■■■□□ 2.48
CHRNA7-220ENST00000636850 TBX22Q9Y458 520 aa30.56■■■□□ 2.48
CHRNA7-220ENST00000636850 TMEM94Q12767 1356 aa30.53■■■□□ 2.48
CHRNA7-220ENST00000636850 SCAF1Q9H7N4 1312 aaKnown RBP30.51■■■□□ 2.48
CHRNA7-220ENST00000636850 PIK3R4Q99570 1358 aa30.51■■■□□ 2.47
CHRNA7-220ENST00000636850 IFT172Q9UG01 1749 aa30.5■■■□□ 2.47
CHRNA7-220ENST00000636850 PIP4K2BP78356 416 aa30.5■■■□□ 2.47
CHRNA7-220ENST00000636850 PROSER2Q86WR7 435 aaPredicted RBP30.49■■■□□ 2.47
CHRNA7-220ENST00000636850 XRN1Q8IZH2 1706 aaKnown RBP30.48■■■□□ 2.47
CHRNA7-220ENST00000636850 SETD1AO15047 1707 aaKnown RBP30.47■■■□□ 2.47
CHRNA7-220ENST00000636850 SPATA31E1Q6ZUB1 1445 aa30.46■■■□□ 2.47
CHRNA7-220ENST00000636850 RPGRIP1LQ68CZ1 1315 aa30.45■■■□□ 2.46
CHRNA7-220ENST00000636850 PTPRUQ92729 1446 aa30.43■■■□□ 2.46
CHRNA7-220ENST00000636850 RBM33Q96EV2 1170 aaKnown RBP30.43■■■□□ 2.46
CHRNA7-220ENST00000636850 VGFO15240 615 aaPredicted RBP30.41■■■□□ 2.46
CHRNA7-220ENST00000636850 HRCP23327 699 aa30.41■■■□□ 2.46
CHRNA7-220ENST00000636850 METP08581 1390 aa30.39■■■□□ 2.45
CHRNA7-220ENST00000636850 MSH6P52701 1360 aa30.38■■■□□ 2.45
CHRNA7-220ENST00000636850 AMOTL2Q9Y2J4 779 aa30.36■■■□□ 2.45
CHRNA7-220ENST00000636850 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
CHRNA7-220ENST00000636850 NCOA3Q9Y6Q9 1424 aa30.34■■■□□ 2.45
CHRNA7-220ENST00000636850 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.33■■■□□ 2.45
CHRNA7-220ENST00000636850 ANKRD30BQ9BXX2 1392 aa30.32■■■□□ 2.44
CHRNA7-220ENST00000636850 HSPA1LP34931 641 aa30.32■■■□□ 2.44
CHRNA7-220ENST00000636850 ROBO1Q9Y6N7 1651 aa30.31■■■□□ 2.44
CHRNA7-220ENST00000636850 C14orf37Q86TY3 774 aa30.3■■■□□ 2.44
CHRNA7-220ENST00000636850 ADGRF5Q8IZF2 1346 aa30.27■■■□□ 2.44
CHRNA7-220ENST00000636850 NALCNQ8IZF0 1738 aa30.26■■■□□ 2.43
CHRNA7-220ENST00000636850 PIK3C2GO75747 1445 aa30.24■■■□□ 2.43
CHRNA7-220ENST00000636850 FAM135BQ49AJ0 1406 aa30.24■■■□□ 2.43
CHRNA7-220ENST00000636850 MYOM2P54296 1465 aa30.24■■■□□ 2.43
CHRNA7-220ENST00000636850 PTCH1Q13635 1447 aa30.23■■■□□ 2.43
CHRNA7-220ENST00000636850 PRAG1Q86YV5 1406 aa30.22■■■□□ 2.43
CHRNA7-220ENST00000636850 LAMC1P11047 1609 aa30.22■■■□□ 2.43
CHRNA7-220ENST00000636850 ASXL1Q8IXJ9 1541 aa30.2■■■□□ 2.42
CHRNA7-220ENST00000636850 DCCP43146 1447 aa30.2■■■□□ 2.42
CHRNA7-220ENST00000636850 NRXN1Q9ULB1 1477 aa30.19■■■□□ 2.42
CHRNA7-220ENST00000636850 C19orf44Q9H6X5 657 aa30.19■■■□□ 2.42
CHRNA7-220ENST00000636850 KNDC1Q76NI1 1749 aa30.19■■■□□ 2.42
CHRNA7-220ENST00000636850 ADGRL3Q9HAR2 1447 aa30.18■■■□□ 2.42
CHRNA7-220ENST00000636850 ATF3P18847 181 aa30.16■■■□□ 2.42
CHRNA7-220ENST00000636850 CADPS2Q86UW7 1296 aa30.16■■■□□ 2.42
CHRNA7-220ENST00000636850 SLAIN2Q9P270 581 aa30.16■■■□□ 2.42
CHRNA7-220ENST00000636850 ROBO2Q9HCK4 1378 aa30.15■■■□□ 2.42
CHRNA7-220ENST00000636850 PHLPP1O60346 1717 aa30.14■■■□□ 2.42
CHRNA7-220ENST00000636850 MED1Q15648 1581 aaPredicted RBP30.11■■■□□ 2.41
CHRNA7-220ENST00000636850 DISP3Q9P2K9 1392 aa30.1■■■□□ 2.41
CHRNA7-220ENST00000636850 TECPR2O15040 1411 aa30.09■■■□□ 2.41
CHRNA7-220ENST00000636850 LRPPRCP42704 1394 aaKnown RBP30.08■■■□□ 2.41
CHRNA7-220ENST00000636850 MST1RQ04912 1400 aa30.06■■■□□ 2.4
CHRNA7-220ENST00000636850 YTHDC2Q9H6S0 1430 aaKnown RBP30.05■■■□□ 2.4
CHRNA7-220ENST00000636850 COL16A1Q07092 1604 aaPredicted RBP30.04■■■□□ 2.4
CHRNA7-220ENST00000636850 TMEM132EQ6IEE7 984 aa30.04■■■□□ 2.4
CHRNA7-220ENST00000636850 STK26Q9P289 416 aa30.04■■■□□ 2.4
CHRNA7-220ENST00000636850 AHDC1Q5TGY3 1603 aaPredicted RBP30.04■■■□□ 2.4
CHRNA7-220ENST00000636850 C14orf93Q9H972 538 aaKnown RBP30.03■■■□□ 2.4
CHRNA7-220ENST00000636850 CDC42BPGQ6DT37 1551 aa30.03■■■□□ 2.4
CHRNA7-220ENST00000636850 ABCC11Q96J66 1382 aa30.02■■■□□ 2.4
CHRNA7-220ENST00000636850 CFAP70Q5T0N1 1121 aa30.01■■■□□ 2.39
CHRNA7-220ENST00000636850 DCAF11Q8TEB1 546 aa30.01■■■□□ 2.39
CHRNA7-220ENST00000636850 DHX57Q6P158 1386 aaKnown RBP30.01■■■□□ 2.39
CHRNA7-220ENST00000636850 NHSL1Q5SYE7 1610 aa30■■■□□ 2.39
CHRNA7-220ENST00000636850 KDM2AQ9Y2K7 1162 aa29.99■■■□□ 2.39
CHRNA7-220ENST00000636850 TRIM26Q12899 539 aaPredicted RBP29.98■■■□□ 2.39
CHRNA7-220ENST00000636850 ADGRB1O14514 1584 aa29.98■■■□□ 2.39
CHRNA7-220ENST00000636850 BRINP3Q76B58 766 aa29.97■■■□□ 2.39
CHRNA7-220ENST00000636850 STAC3Q96MF2 364 aa29.95■■■□□ 2.39
CHRNA7-220ENST00000636850 C1orf167Q5SNV9 1468 aa29.93■■■□□ 2.38
CHRNA7-220ENST00000636850 PLEKHH1Q9ULM0 1364 aa29.93■■■□□ 2.38
CHRNA7-220ENST00000636850 DLC1Q96QB1 1528 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms