RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 MPHOSPH9Q99550 1183 aa25.22■■□□□ 1.63
LIN28B-202ENST00000635857 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.21■■□□□ 1.63
LIN28B-202ENST00000635857 LTBP4Q8N2S1 1624 aa25.2■■□□□ 1.62
LIN28B-202ENST00000635857 ZNF326Q5BKZ1 582 aaKnown RBP25.19■■□□□ 1.62
LIN28B-202ENST00000635857 ZFYVE9O95405 1425 aa25.18■■□□□ 1.62
LIN28B-202ENST00000635857 CPS1P31327 1500 aa25.17■■□□□ 1.62
LIN28B-202ENST00000635857 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
LIN28B-202ENST00000635857 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
LIN28B-202ENST00000635857 FOXD1Q16676 465 aa25.14■■□□□ 1.62
LIN28B-202ENST00000635857 FBXO41Q8TF61 875 aa25.14■■□□□ 1.62
LIN28B-202ENST00000635857 HRCP23327 699 aa25.13■■□□□ 1.61
LIN28B-202ENST00000635857 PLEKHG1Q9ULL1 1385 aa25.13■■□□□ 1.61
LIN28B-202ENST00000635857 NUTM2DQ5VT03 806 aaPredicted RBP25.09■■□□□ 1.61
LIN28B-202ENST00000635857 SLC26A8Q96RN1 970 aa25.08■■□□□ 1.61
LIN28B-202ENST00000635857 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.61
LIN28B-202ENST00000635857 ILDR1Q86SU0 546 aaPredicted RBP25.07■■□□□ 1.6
LIN28B-202ENST00000635857 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
LIN28B-202ENST00000635857 NEXMIFQ5QGS0 1516 aa25.04■■□□□ 1.6
LIN28B-202ENST00000635857 STRCP1A6NGW2 1772 aa25.03■■□□□ 1.6
LIN28B-202ENST00000635857 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
LIN28B-202ENST00000635857 VGFO15240 615 aaPredicted RBP24.99■■□□□ 1.59
LIN28B-202ENST00000635857 TBX22Q9Y458 520 aa24.99■■□□□ 1.59
LIN28B-202ENST00000635857 KCNA6P17658 529 aa24.98■■□□□ 1.59
LIN28B-202ENST00000635857 TRIM26Q12899 539 aaPredicted RBP24.98■■□□□ 1.59
LIN28B-202ENST00000635857 PPLO60437 1756 aa24.98■■□□□ 1.59
LIN28B-202ENST00000635857 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
LIN28B-202ENST00000635857 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
LIN28B-202ENST00000635857 LRRC7Q96NW7 1537 aa24.96■■□□□ 1.59
LIN28B-202ENST00000635857 NKTRP30414 1462 aaKnown RBP24.96■■□□□ 1.59
LIN28B-202ENST00000635857 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
LIN28B-202ENST00000635857 UBAP1LF5GYI3 381 aa24.95■■□□□ 1.58
LIN28B-202ENST00000635857 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
LIN28B-202ENST00000635857 PIK3R4Q99570 1358 aa24.94■■□□□ 1.58
LIN28B-202ENST00000635857 CHD2O14647 1828 aaKnown RBP24.94■■□□□ 1.58
LIN28B-202ENST00000635857 SPATA31E1Q6ZUB1 1445 aa24.93■■□□□ 1.58
LIN28B-202ENST00000635857 NRXN3Q9Y4C0 1643 aa24.93■■□□□ 1.58
LIN28B-202ENST00000635857 TOM1O60784 492 aa24.91■■□□□ 1.58
LIN28B-202ENST00000635857 PROSER2Q86WR7 435 aaPredicted RBP24.91■■□□□ 1.58
LIN28B-202ENST00000635857 ANKRD30BQ9BXX2 1392 aa24.91■■□□□ 1.58
LIN28B-202ENST00000635857 IFT172Q9UG01 1749 aa24.89■■□□□ 1.58
LIN28B-202ENST00000635857 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
LIN28B-202ENST00000635857 TMEM94Q12767 1356 aa24.86■■□□□ 1.57
LIN28B-202ENST00000635857 XIRP1Q702N8 1843 aaKnown RBP24.85■■□□□ 1.57
LIN28B-202ENST00000635857 AMOTL2Q9Y2J4 779 aa24.83■■□□□ 1.57
LIN28B-202ENST00000635857 ALKQ9UM73 1620 aa24.83■■□□□ 1.56
LIN28B-202ENST00000635857 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
LIN28B-202ENST00000635857 METP08581 1390 aa24.8■■□□□ 1.56
LIN28B-202ENST00000635857 MSH6P52701 1360 aa24.8■■□□□ 1.56
LIN28B-202ENST00000635857 PIP4K2BP78356 416 aa24.8■■□□□ 1.56
LIN28B-202ENST00000635857 XRN1Q8IZH2 1706 aaKnown RBP24.8■■□□□ 1.56
LIN28B-202ENST00000635857 ADGRF5Q8IZF2 1346 aa24.79■■□□□ 1.56
LIN28B-202ENST00000635857 NCOA3Q9Y6Q9 1424 aa24.78■■□□□ 1.56
LIN28B-202ENST00000635857 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
LIN28B-202ENST00000635857 MYOM2P54296 1465 aa24.78■■□□□ 1.56
LIN28B-202ENST00000635857 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
LIN28B-202ENST00000635857 RBM33Q96EV2 1170 aaKnown RBP24.77■■□□□ 1.56
LIN28B-202ENST00000635857 PIK3C2GO75747 1445 aa24.76■■□□□ 1.55
LIN28B-202ENST00000635857 LAMC1P11047 1609 aa24.75■■□□□ 1.55
LIN28B-202ENST00000635857 DCAF11Q8TEB1 546 aa24.71■■□□□ 1.55
LIN28B-202ENST00000635857 STAC3Q96MF2 364 aa24.71■■□□□ 1.55
LIN28B-202ENST00000635857 KDM2AQ9Y2K7 1162 aa24.7■■□□□ 1.54
LIN28B-202ENST00000635857 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.54
LIN28B-202ENST00000635857 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
LIN28B-202ENST00000635857 ATF3P18847 181 aa24.68■■□□□ 1.54
LIN28B-202ENST00000635857 C19orf44Q9H6X5 657 aa24.67■■□□□ 1.54
LIN28B-202ENST00000635857 DHX57Q6P158 1386 aaKnown RBP24.67■■□□□ 1.54
LIN28B-202ENST00000635857 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
LIN28B-202ENST00000635857 CADPS2Q86UW7 1296 aa24.66■■□□□ 1.54
LIN28B-202ENST00000635857 PRAG1Q86YV5 1406 aa24.64■■□□□ 1.54
LIN28B-202ENST00000635857 C14orf93Q9H972 538 aaKnown RBP24.64■■□□□ 1.54
LIN28B-202ENST00000635857 DCCP43146 1447 aa24.63■■□□□ 1.53
LIN28B-202ENST00000635857 STK26Q9P289 416 aa24.63■■□□□ 1.53
LIN28B-202ENST00000635857 KNDC1Q76NI1 1749 aa24.63■■□□□ 1.53
LIN28B-202ENST00000635857 ADGRL3Q9HAR2 1447 aa24.62■■□□□ 1.53
LIN28B-202ENST00000635857 LRPPRCP42704 1394 aaKnown RBP24.62■■□□□ 1.53
LIN28B-202ENST00000635857 CFAP70Q5T0N1 1121 aa24.61■■□□□ 1.53
LIN28B-202ENST00000635857 TMEM132EQ6IEE7 984 aa24.61■■□□□ 1.53
LIN28B-202ENST00000635857 ROBO2Q9HCK4 1378 aa24.61■■□□□ 1.53
LIN28B-202ENST00000635857 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
LIN28B-202ENST00000635857 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
LIN28B-202ENST00000635857 YTHDC2Q9H6S0 1430 aaKnown RBP24.61■■□□□ 1.53
LIN28B-202ENST00000635857 ROBO1Q9Y6N7 1651 aa24.6■■□□□ 1.53
LIN28B-202ENST00000635857 SLAIN2Q9P270 581 aa24.6■■□□□ 1.53
LIN28B-202ENST00000635857 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
LIN28B-202ENST00000635857 NEUROD1Q13562 356 aa24.59■■□□□ 1.53
LIN28B-202ENST00000635857 TECPR2O15040 1411 aa24.58■■□□□ 1.53
LIN28B-202ENST00000635857 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
LIN28B-202ENST00000635857 HSPA1LP34931 641 aa24.57■■□□□ 1.52
LIN28B-202ENST00000635857 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
LIN28B-202ENST00000635857 SIN3AQ96ST3 1273 aa24.56■■□□□ 1.52
LIN28B-202ENST00000635857 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
LIN28B-202ENST00000635857 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
LIN28B-202ENST00000635857 SIRT1Q96EB6 747 aa24.49■■□□□ 1.51
LIN28B-202ENST00000635857 DLC1Q96QB1 1528 aa24.49■■□□□ 1.51
LIN28B-202ENST00000635857 CDC42BPGQ6DT37 1551 aa24.49■■□□□ 1.51
LIN28B-202ENST00000635857 PHLPP1O60346 1717 aa24.48■■□□□ 1.51
LIN28B-202ENST00000635857 MST1RQ04912 1400 aa24.48■■□□□ 1.51
LIN28B-202ENST00000635857 WAPLQ7Z5K2 1190 aa24.48■■□□□ 1.51
LIN28B-202ENST00000635857 L3MBTL2Q969R5 705 aa24.48■■□□□ 1.51
LIN28B-202ENST00000635857 POGKQ9P215 609 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms