RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ZFYVE9O95405 1425 aa27.69■■■□□ 2.02
PNKP-224ENST00000631020 TOM1O60784 492 aa27.67■■■□□ 2.02
PNKP-224ENST00000631020 HDGFP51858 240 aaKnown RBP27.66■■■□□ 2.02
PNKP-224ENST00000631020 SPHKAPQ2M3C7 1700 aa27.64■■■□□ 2.02
PNKP-224ENST00000631020 RIMS2Q9UQ26 1411 aa27.63■■■□□ 2.01
PNKP-224ENST00000631020 ACIN1Q9UKV3 1341 aaKnown RBP27.62■■■□□ 2.01
PNKP-224ENST00000631020 PLEKHG1Q9ULL1 1385 aa27.61■■■□□ 2.01
PNKP-224ENST00000631020 ALKQ9UM73 1620 aa27.6■■■□□ 2.01
PNKP-224ENST00000631020 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
PNKP-224ENST00000631020 SLC4A1APQ9BWU0 796 aaKnown RBP27.58■■■□□ 2.01
PNKP-224ENST00000631020 XIRP1Q702N8 1843 aaKnown RBP27.58■■■□□ 2.01
PNKP-224ENST00000631020 NWD1Q149M9 1564 aa27.57■■■□□ 2
PNKP-224ENST00000631020 MPHOSPH9Q99550 1183 aa27.57■■■□□ 2
PNKP-224ENST00000631020 KCNA6P17658 529 aa27.57■■■□□ 2
PNKP-224ENST00000631020 SLC26A8Q96RN1 970 aa27.56■■■□□ 2
PNKP-224ENST00000631020 NKTRP30414 1462 aaKnown RBP27.54■■■□□ 2
PNKP-224ENST00000631020 PPP1R15AO75807 674 aaPredicted RBP27.54■■■□□ 2
PNKP-224ENST00000631020 CHGAP10645 457 aaKnown RBP27.53■■■□□ 2
PNKP-224ENST00000631020 PIP4K2BP78356 416 aa27.52■■■□□ 2
PNKP-224ENST00000631020 TRPM2O94759 1503 aa27.52■■■□□ 2
PNKP-224ENST00000631020 DIP2AQ14689 1571 aa27.51■■□□□ 1.99
PNKP-224ENST00000631020 CHD2O14647 1828 aaKnown RBP27.51■■□□□ 1.99
PNKP-224ENST00000631020 SCAF1Q9H7N4 1312 aaKnown RBP27.5■■□□□ 1.99
PNKP-224ENST00000631020 BCANQ96GW7 911 aa27.5■■□□□ 1.99
PNKP-224ENST00000631020 FOXD1Q16676 465 aa27.49■■□□□ 1.99
PNKP-224ENST00000631020 TBX22Q9Y458 520 aa27.49■■□□□ 1.99
PNKP-224ENST00000631020 TMEM94Q12767 1356 aa27.47■■□□□ 1.99
PNKP-224ENST00000631020 CLTCL1P53675 1640 aa27.46■■□□□ 1.99
PNKP-224ENST00000631020 ADAMTS13Q76LX8 1427 aa27.45■■□□□ 1.99
PNKP-224ENST00000631020 PIK3R4Q99570 1358 aa27.45■■□□□ 1.99
PNKP-224ENST00000631020 HSPA1LP34931 641 aa27.45■■□□□ 1.98
PNKP-224ENST00000631020 KIF1BO60333 1816 aa27.44■■□□□ 1.98
PNKP-224ENST00000631020 DISP3Q9P2K9 1392 aa27.43■■□□□ 1.98
PNKP-224ENST00000631020 PROSER2Q86WR7 435 aaPredicted RBP27.42■■□□□ 1.98
PNKP-224ENST00000631020 SETBP1Q9Y6X0 1596 aa27.4■■□□□ 1.98
PNKP-224ENST00000631020 DHX57Q6P158 1386 aaKnown RBP27.39■■□□□ 1.98
PNKP-224ENST00000631020 NCOA3Q9Y6Q9 1424 aa27.39■■□□□ 1.97
PNKP-224ENST00000631020 NUTM2DQ5VT03 806 aaPredicted RBP27.38■■□□□ 1.97
PNKP-224ENST00000631020 NRXN3Q9Y4C0 1643 aa27.37■■□□□ 1.97
PNKP-224ENST00000631020 NEXMIFQ5QGS0 1516 aa27.36■■□□□ 1.97
PNKP-224ENST00000631020 FAM135BQ49AJ0 1406 aa27.35■■□□□ 1.97
PNKP-224ENST00000631020 ZNF326Q5BKZ1 582 aaKnown RBP27.35■■□□□ 1.97
PNKP-224ENST00000631020 SENP3Q9H4L4 574 aaPredicted RBP27.34■■□□□ 1.97
PNKP-224ENST00000631020 MSH6P52701 1360 aa27.34■■□□□ 1.97
PNKP-224ENST00000631020 ANKRD30BQ9BXX2 1392 aa27.31■■□□□ 1.96
PNKP-224ENST00000631020 RBM33Q96EV2 1170 aaKnown RBP27.28■■□□□ 1.96
PNKP-224ENST00000631020 XRN1Q8IZH2 1706 aaKnown RBP27.28■■□□□ 1.96
PNKP-224ENST00000631020 RPGRIP1LQ68CZ1 1315 aa27.27■■□□□ 1.96
PNKP-224ENST00000631020 ROBO1Q9Y6N7 1651 aa27.26■■□□□ 1.96
PNKP-224ENST00000631020 MED1Q15648 1581 aaPredicted RBP27.26■■□□□ 1.95
PNKP-224ENST00000631020 PTPRUQ92729 1446 aa27.26■■□□□ 1.95
PNKP-224ENST00000631020 AMOTL2Q9Y2J4 779 aa27.25■■□□□ 1.95
PNKP-224ENST00000631020 VGFO15240 615 aaPredicted RBP27.23■■□□□ 1.95
PNKP-224ENST00000631020 PPLO60437 1756 aa27.23■■□□□ 1.95
PNKP-224ENST00000631020 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.21■■□□□ 1.95
PNKP-224ENST00000631020 CCDC144AA2RUR9 1427 aa27.21■■□□□ 1.95
PNKP-224ENST00000631020 C19orf44Q9H6X5 657 aa27.21■■□□□ 1.95
PNKP-224ENST00000631020 SLAIN2Q9P270 581 aa27.21■■□□□ 1.95
PNKP-224ENST00000631020 METP08581 1390 aa27.2■■□□□ 1.94
PNKP-224ENST00000631020 SETD1AO15047 1707 aaKnown RBP27.18■■□□□ 1.94
PNKP-224ENST00000631020 ILDR2Q71H61 639 aa27.18■■□□□ 1.94
PNKP-224ENST00000631020 DCCP43146 1447 aa27.18■■□□□ 1.94
PNKP-224ENST00000631020 CADPS2Q86UW7 1296 aa27.17■■□□□ 1.94
PNKP-224ENST00000631020 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
PNKP-224ENST00000631020 SIN3AQ96ST3 1273 aa27.16■■□□□ 1.94
PNKP-224ENST00000631020 SPATA31E1Q6ZUB1 1445 aa27.14■■□□□ 1.94
PNKP-224ENST00000631020 PRAG1Q86YV5 1406 aa27.12■■□□□ 1.93
PNKP-224ENST00000631020 ATF3P18847 181 aa27.12■■□□□ 1.93
PNKP-224ENST00000631020 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
PNKP-224ENST00000631020 IFT172Q9UG01 1749 aa27.12■■□□□ 1.93
PNKP-224ENST00000631020 PHLPP1O60346 1717 aa27.1■■□□□ 1.93
PNKP-224ENST00000631020 PTCH1Q13635 1447 aa27.09■■□□□ 1.93
PNKP-224ENST00000631020 ADGRL3Q9HAR2 1447 aa27.07■■□□□ 1.92
PNKP-224ENST00000631020 NEUROD1Q13562 356 aa27.06■■□□□ 1.92
PNKP-224ENST00000631020 RGL3Q3MIN7 710 aa27.06■■□□□ 1.92
PNKP-224ENST00000631020 AHDC1Q5TGY3 1603 aaPredicted RBP27.05■■□□□ 1.92
PNKP-224ENST00000631020 NALCNQ8IZF0 1738 aa27.04■■□□□ 1.92
PNKP-224ENST00000631020 COL16A1Q07092 1604 aaPredicted RBP27.04■■□□□ 1.92
PNKP-224ENST00000631020 CLSPNQ9HAW4 1339 aa27.04■■□□□ 1.92
PNKP-224ENST00000631020 SOCS7O14512 581 aa27.04■■□□□ 1.92
PNKP-224ENST00000631020 PHF23Q9BUL5 403 aaPredicted RBP27.01■■□□□ 1.91
PNKP-224ENST00000631020 MST1RQ04912 1400 aa27■■□□□ 1.91
PNKP-224ENST00000631020 ADGRF5Q8IZF2 1346 aa27■■□□□ 1.91
PNKP-224ENST00000631020 JCADQ9P266 1359 aa26.99■■□□□ 1.91
PNKP-224ENST00000631020 ROBO2Q9HCK4 1378 aa26.99■■□□□ 1.91
PNKP-224ENST00000631020 PIK3C2GO75747 1445 aa26.98■■□□□ 1.91
PNKP-224ENST00000631020 BRINP3Q76B58 766 aa26.97■■□□□ 1.91
PNKP-224ENST00000631020 ASXL1Q8IXJ9 1541 aa26.96■■□□□ 1.91
PNKP-224ENST00000631020 TECPR2O15040 1411 aa26.94■■□□□ 1.9
PNKP-224ENST00000631020 MYOM2P54296 1465 aa26.94■■□□□ 1.9
PNKP-224ENST00000631020 NHSL1Q5SYE7 1610 aa26.93■■□□□ 1.9
PNKP-224ENST00000631020 NRXN1Q9ULB1 1477 aa26.93■■□□□ 1.9
PNKP-224ENST00000631020 SHPRHQ149N8 1683 aa26.93■■□□□ 1.9
PNKP-224ENST00000631020 L3MBTL2Q969R5 705 aa26.92■■□□□ 1.9
PNKP-224ENST00000631020 KNDC1Q76NI1 1749 aa26.92■■□□□ 1.9
PNKP-224ENST00000631020 LAMC1P11047 1609 aa26.91■■□□□ 1.9
PNKP-224ENST00000631020 DCAF11Q8TEB1 546 aa26.9■■□□□ 1.9
PNKP-224ENST00000631020 LRPPRCP42704 1394 aaKnown RBP26.89■■□□□ 1.9
PNKP-224ENST00000631020 SPATA31A6Q5VVP1 1343 aa26.89■■□□□ 1.89
PNKP-224ENST00000631020 ABCC11Q96J66 1382 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms