RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 LTBP4Q8N2S1 1624 aa20.23■□□□□ 0.83
PFDN5-220ENST00000628881 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
PFDN5-220ENST00000628881 ZNF335Q9H4Z2 1342 aaPredicted RBP20.21■□□□□ 0.83
PFDN5-220ENST00000628881 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
PFDN5-220ENST00000628881 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
PFDN5-220ENST00000628881 PLEKHG1Q9ULL1 1385 aa20.19■□□□□ 0.82
PFDN5-220ENST00000628881 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
PFDN5-220ENST00000628881 ZNF326Q5BKZ1 582 aaKnown RBP20.17■□□□□ 0.82
PFDN5-220ENST00000628881 CERKQ8TCT0 537 aa20.17■□□□□ 0.82
PFDN5-220ENST00000628881 NEXMIFQ5QGS0 1516 aa20.15■□□□□ 0.82
PFDN5-220ENST00000628881 CPS1P31327 1500 aa20.14■□□□□ 0.81
PFDN5-220ENST00000628881 NUTM2DQ5VT03 806 aaPredicted RBP20.13■□□□□ 0.81
PFDN5-220ENST00000628881 BCANQ96GW7 911 aa20.12■□□□□ 0.81
PFDN5-220ENST00000628881 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
PFDN5-220ENST00000628881 SPATA31E1Q6ZUB1 1445 aa20.11■□□□□ 0.81
PFDN5-220ENST00000628881 ANKRD30BQ9BXX2 1392 aa20.11■□□□□ 0.81
PFDN5-220ENST00000628881 SLC26A8Q96RN1 970 aa20.11■□□□□ 0.81
PFDN5-220ENST00000628881 STRCP1A6NGW2 1772 aa20.11■□□□□ 0.81
PFDN5-220ENST00000628881 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
PFDN5-220ENST00000628881 DIP2AQ14689 1571 aa20.1■□□□□ 0.81
PFDN5-220ENST00000628881 SETBP1Q9Y6X0 1596 aa20.09■□□□□ 0.81
PFDN5-220ENST00000628881 ADAMTS13Q76LX8 1427 aa20.09■□□□□ 0.81
PFDN5-220ENST00000628881 PPLO60437 1756 aa20.08■□□□□ 0.81
PFDN5-220ENST00000628881 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
PFDN5-220ENST00000628881 NRXN3Q9Y4C0 1643 aa20.07■□□□□ 0.8
PFDN5-220ENST00000628881 TBX22Q9Y458 520 aa20.07■□□□□ 0.8
PFDN5-220ENST00000628881 NWD1Q149M9 1564 aa20.06■□□□□ 0.8
PFDN5-220ENST00000628881 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
PFDN5-220ENST00000628881 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
PFDN5-220ENST00000628881 KCNA6P17658 529 aa20.04■□□□□ 0.8
PFDN5-220ENST00000628881 RGL3Q3MIN7 710 aa20.04■□□□□ 0.8
PFDN5-220ENST00000628881 FBXO41Q8TF61 875 aa20.04■□□□□ 0.8
PFDN5-220ENST00000628881 LRRC7Q96NW7 1537 aa20.03■□□□□ 0.8
PFDN5-220ENST00000628881 PIK3R4Q99570 1358 aa20.03■□□□□ 0.8
PFDN5-220ENST00000628881 CHD2O14647 1828 aaKnown RBP20.02■□□□□ 0.8
PFDN5-220ENST00000628881 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
PFDN5-220ENST00000628881 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
PFDN5-220ENST00000628881 SETD1AO15047 1707 aaKnown RBP19.97■□□□□ 0.79
PFDN5-220ENST00000628881 ALKQ9UM73 1620 aa19.96■□□□□ 0.79
PFDN5-220ENST00000628881 MYOM2P54296 1465 aa19.96■□□□□ 0.79
PFDN5-220ENST00000628881 ADGRF5Q8IZF2 1346 aa19.96■□□□□ 0.79
PFDN5-220ENST00000628881 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.79
PFDN5-220ENST00000628881 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
PFDN5-220ENST00000628881 PTPRUQ92729 1446 aa19.95■□□□□ 0.78
PFDN5-220ENST00000628881 METP08581 1390 aa19.95■□□□□ 0.78
PFDN5-220ENST00000628881 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
PFDN5-220ENST00000628881 TMEM94Q12767 1356 aa19.94■□□□□ 0.78
PFDN5-220ENST00000628881 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
PFDN5-220ENST00000628881 PROSER2Q86WR7 435 aaPredicted RBP19.93■□□□□ 0.78
PFDN5-220ENST00000628881 NRXN1Q9ULB1 1477 aa19.92■□□□□ 0.78
PFDN5-220ENST00000628881 AMOTL2Q9Y2J4 779 aa19.92■□□□□ 0.78
PFDN5-220ENST00000628881 UBAP1LF5GYI3 381 aa19.91■□□□□ 0.78
PFDN5-220ENST00000628881 NCOA3Q9Y6Q9 1424 aa19.88■□□□□ 0.77
PFDN5-220ENST00000628881 TOM1O60784 492 aa19.88■□□□□ 0.77
PFDN5-220ENST00000628881 STAC3Q96MF2 364 aa19.88■□□□□ 0.77
PFDN5-220ENST00000628881 LAMC1P11047 1609 aa19.87■□□□□ 0.77
PFDN5-220ENST00000628881 RBM33Q96EV2 1170 aaKnown RBP19.87■□□□□ 0.77
PFDN5-220ENST00000628881 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
PFDN5-220ENST00000628881 PRAG1Q86YV5 1406 aa19.86■□□□□ 0.77
PFDN5-220ENST00000628881 DCAF11Q8TEB1 546 aa19.86■□□□□ 0.77
PFDN5-220ENST00000628881 ASXL1Q8IXJ9 1541 aa19.85■□□□□ 0.77
PFDN5-220ENST00000628881 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
PFDN5-220ENST00000628881 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
PFDN5-220ENST00000628881 MSH6P52701 1360 aa19.83■□□□□ 0.77
PFDN5-220ENST00000628881 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
PFDN5-220ENST00000628881 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
PFDN5-220ENST00000628881 CFAP70Q5T0N1 1121 aa19.81■□□□□ 0.76
PFDN5-220ENST00000628881 KNDC1Q76NI1 1749 aa19.8■□□□□ 0.76
PFDN5-220ENST00000628881 C14orf37Q86TY3 774 aa19.8■□□□□ 0.76
PFDN5-220ENST00000628881 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
PFDN5-220ENST00000628881 ROBO2Q9HCK4 1378 aa19.8■□□□□ 0.76
PFDN5-220ENST00000628881 TECPR2O15040 1411 aa19.79■□□□□ 0.76
PFDN5-220ENST00000628881 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
PFDN5-220ENST00000628881 TMEM132EQ6IEE7 984 aa19.79■□□□□ 0.76
PFDN5-220ENST00000628881 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.79■□□□□ 0.76
PFDN5-220ENST00000628881 YTHDC2Q9H6S0 1430 aaKnown RBP19.78■□□□□ 0.76
PFDN5-220ENST00000628881 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
PFDN5-220ENST00000628881 ABCC11Q96J66 1382 aa19.78■□□□□ 0.76
PFDN5-220ENST00000628881 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
PFDN5-220ENST00000628881 C19orf44Q9H6X5 657 aa19.77■□□□□ 0.76
PFDN5-220ENST00000628881 ADGRL3Q9HAR2 1447 aa19.76■□□□□ 0.75
PFDN5-220ENST00000628881 ADGRB1O14514 1584 aa19.76■□□□□ 0.75
PFDN5-220ENST00000628881 NALCNQ8IZF0 1738 aa19.76■□□□□ 0.75
PFDN5-220ENST00000628881 DCCP43146 1447 aa19.76■□□□□ 0.75
PFDN5-220ENST00000628881 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
PFDN5-220ENST00000628881 STK26Q9P289 416 aa19.75■□□□□ 0.75
PFDN5-220ENST00000628881 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
PFDN5-220ENST00000628881 CADPS2Q86UW7 1296 aa19.74■□□□□ 0.75
PFDN5-220ENST00000628881 ATF3P18847 181 aa19.73■□□□□ 0.75
PFDN5-220ENST00000628881 FAM135BQ49AJ0 1406 aa19.72■□□□□ 0.75
PFDN5-220ENST00000628881 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
PFDN5-220ENST00000628881 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
PFDN5-220ENST00000628881 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
PFDN5-220ENST00000628881 ROBO1Q9Y6N7 1651 aa19.7■□□□□ 0.74
PFDN5-220ENST00000628881 WAPLQ7Z5K2 1190 aa19.68■□□□□ 0.74
PFDN5-220ENST00000628881 TONSLQ96HA7 1378 aa19.68■□□□□ 0.74
PFDN5-220ENST00000628881 PLEKHH1Q9ULM0 1364 aa19.68■□□□□ 0.74
PFDN5-220ENST00000628881 MST1RQ04912 1400 aa19.67■□□□□ 0.74
PFDN5-220ENST00000628881 CDC42BPGQ6DT37 1551 aa19.66■□□□□ 0.74
PFDN5-220ENST00000628881 HSPA1LP34931 641 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms