RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 HDGFP51858 240 aaKnown RBP18.38■□□□□ 0.53
UBR1-212ENST00000627960 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
UBR1-212ENST00000627960 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
UBR1-212ENST00000627960 KCNA6P17658 529 aa18.37■□□□□ 0.53
UBR1-212ENST00000627960 HSPA1LP34931 641 aa18.37■□□□□ 0.53
UBR1-212ENST00000627960 BCANQ96GW7 911 aa18.36■□□□□ 0.53
UBR1-212ENST00000627960 NAIPQ13075 1403 aa18.35■□□□□ 0.53
UBR1-212ENST00000627960 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
UBR1-212ENST00000627960 PPP1R15AO75807 674 aaPredicted RBP18.34■□□□□ 0.53
UBR1-212ENST00000627960 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.34■□□□□ 0.53
UBR1-212ENST00000627960 SPHKAPQ2M3C7 1700 aa18.34■□□□□ 0.53
UBR1-212ENST00000627960 CHD2O14647 1828 aaKnown RBP18.33■□□□□ 0.52
UBR1-212ENST00000627960 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
UBR1-212ENST00000627960 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
UBR1-212ENST00000627960 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
UBR1-212ENST00000627960 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
UBR1-212ENST00000627960 TBX22Q9Y458 520 aa18.3■□□□□ 0.52
UBR1-212ENST00000627960 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
UBR1-212ENST00000627960 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
UBR1-212ENST00000627960 HFM1A2PYH4 1435 aa18.29■□□□□ 0.52
UBR1-212ENST00000627960 ILDR2Q71H61 639 aa18.27■□□□□ 0.52
UBR1-212ENST00000627960 ADAMTS13Q76LX8 1427 aa18.26■□□□□ 0.51
UBR1-212ENST00000627960 RBM33Q96EV2 1170 aaKnown RBP18.26■□□□□ 0.51
UBR1-212ENST00000627960 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
UBR1-212ENST00000627960 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
UBR1-212ENST00000627960 TRPM2O94759 1503 aa18.23■□□□□ 0.51
UBR1-212ENST00000627960 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
UBR1-212ENST00000627960 KIF1BO60333 1816 aa18.23■□□□□ 0.51
UBR1-212ENST00000627960 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
UBR1-212ENST00000627960 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
UBR1-212ENST00000627960 FAM135BQ49AJ0 1406 aa18.22■□□□□ 0.51
UBR1-212ENST00000627960 MED1Q15648 1581 aaPredicted RBP18.21■□□□□ 0.51
UBR1-212ENST00000627960 MSH6P52701 1360 aa18.2■□□□□ 0.5
UBR1-212ENST00000627960 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
UBR1-212ENST00000627960 NRXN3Q9Y4C0 1643 aa18.19■□□□□ 0.5
UBR1-212ENST00000627960 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
UBR1-212ENST00000627960 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
UBR1-212ENST00000627960 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
UBR1-212ENST00000627960 NEXMIFQ5QGS0 1516 aa18.17■□□□□ 0.5
UBR1-212ENST00000627960 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
UBR1-212ENST00000627960 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
UBR1-212ENST00000627960 SLAIN2Q9P270 581 aa18.15■□□□□ 0.5
UBR1-212ENST00000627960 SOCS7O14512 581 aa18.13■□□□□ 0.49
UBR1-212ENST00000627960 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
UBR1-212ENST00000627960 C14orf37Q86TY3 774 aa18.12■□□□□ 0.49
UBR1-212ENST00000627960 XRN1Q8IZH2 1706 aaKnown RBP18.12■□□□□ 0.49
UBR1-212ENST00000627960 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
UBR1-212ENST00000627960 METP08581 1390 aa18.11■□□□□ 0.49
UBR1-212ENST00000627960 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
UBR1-212ENST00000627960 FOXD1Q16676 465 aa18.1■□□□□ 0.49
UBR1-212ENST00000627960 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
UBR1-212ENST00000627960 CADPS2Q86UW7 1296 aa18.09■□□□□ 0.49
UBR1-212ENST00000627960 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
UBR1-212ENST00000627960 ATF3P18847 181 aa18.08■□□□□ 0.48
UBR1-212ENST00000627960 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
UBR1-212ENST00000627960 PPLO60437 1756 aa18.08■□□□□ 0.48
UBR1-212ENST00000627960 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
UBR1-212ENST00000627960 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
UBR1-212ENST00000627960 SETD1AO15047 1707 aaKnown RBP18.05■□□□□ 0.48
UBR1-212ENST00000627960 SETD5Q9C0A6 1442 aa18.05■□□□□ 0.48
UBR1-212ENST00000627960 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
UBR1-212ENST00000627960 DCCP43146 1447 aa18.02■□□□□ 0.48
UBR1-212ENST00000627960 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
UBR1-212ENST00000627960 SPATA31E1Q6ZUB1 1445 aa18■□□□□ 0.47
UBR1-212ENST00000627960 AHDC1Q5TGY3 1603 aaPredicted RBP17.99■□□□□ 0.47
UBR1-212ENST00000627960 IFT172Q9UG01 1749 aa17.99■□□□□ 0.47
UBR1-212ENST00000627960 RGL3Q3MIN7 710 aa17.99■□□□□ 0.47
UBR1-212ENST00000627960 JCADQ9P266 1359 aa17.99■□□□□ 0.47
UBR1-212ENST00000627960 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
UBR1-212ENST00000627960 NALCNQ8IZF0 1738 aa17.98■□□□□ 0.47
UBR1-212ENST00000627960 RGS17Q9UGC6 210 aaPredicted RBP17.98■□□□□ 0.47
UBR1-212ENST00000627960 MST1RQ04912 1400 aa17.98■□□□□ 0.47
UBR1-212ENST00000627960 BRINP3Q76B58 766 aa17.97■□□□□ 0.47
UBR1-212ENST00000627960 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
UBR1-212ENST00000627960 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
UBR1-212ENST00000627960 RAB3GAP2Q9H2M9 1393 aa17.96■□□□□ 0.47
UBR1-212ENST00000627960 PRAG1Q86YV5 1406 aa17.96■□□□□ 0.47
UBR1-212ENST00000627960 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
UBR1-212ENST00000627960 ROBO2Q9HCK4 1378 aa17.95■□□□□ 0.46
UBR1-212ENST00000627960 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
UBR1-212ENST00000627960 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
UBR1-212ENST00000627960 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
UBR1-212ENST00000627960 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
UBR1-212ENST00000627960 C1orf167Q5SNV9 1468 aa17.89■□□□□ 0.45
UBR1-212ENST00000627960 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
UBR1-212ENST00000627960 HRCP23327 699 aa17.88■□□□□ 0.45
UBR1-212ENST00000627960 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
UBR1-212ENST00000627960 STK26Q9P289 416 aa17.87■□□□□ 0.45
UBR1-212ENST00000627960 LRPPRCP42704 1394 aaKnown RBP17.87■□□□□ 0.45
UBR1-212ENST00000627960 LRP6O75581 1613 aa17.87■□□□□ 0.45
UBR1-212ENST00000627960 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
UBR1-212ENST00000627960 TECPR2O15040 1411 aa17.86■□□□□ 0.45
UBR1-212ENST00000627960 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
UBR1-212ENST00000627960 DDX17Q92841 729 aaKnown RBP17.85■□□□□ 0.45
UBR1-212ENST00000627960 LRRC59Q96AG4 307 aaKnown RBP17.85■□□□□ 0.45
UBR1-212ENST00000627960 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
UBR1-212ENST00000627960 C14orf93Q9H972 538 aaKnown RBP17.85■□□□□ 0.45
UBR1-212ENST00000627960 LAMC1P11047 1609 aa17.84■□□□□ 0.45
UBR1-212ENST00000627960 MYOM2P54296 1465 aa17.84■□□□□ 0.45
UBR1-212ENST00000627960 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 505.1 ms