RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
SPTAN1-213ENST00000627809 NWD1Q149M9 1564 aa12.31□□□□□ -0.44
SPTAN1-213ENST00000627809 RIMS2Q9UQ26 1411 aa12.31□□□□□ -0.44
SPTAN1-213ENST00000627809 TXNDC2Q86VQ3 553 aa12.31□□□□□ -0.44
SPTAN1-213ENST00000627809 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
SPTAN1-213ENST00000627809 NEXMIFQ5QGS0 1516 aa12.31□□□□□ -0.44
SPTAN1-213ENST00000627809 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
SPTAN1-213ENST00000627809 IFT172Q9UG01 1749 aa12.3□□□□□ -0.44
SPTAN1-213ENST00000627809 PPLO60437 1756 aa12.3□□□□□ -0.44
SPTAN1-213ENST00000627809 CPS1P31327 1500 aa12.29□□□□□ -0.44
SPTAN1-213ENST00000627809 IQSEC2Q5JU85 1478 aa12.28□□□□□ -0.44
SPTAN1-213ENST00000627809 PTPRUQ92729 1446 aa12.28□□□□□ -0.44
SPTAN1-213ENST00000627809 XRN1Q8IZH2 1706 aaKnown RBP12.26□□□□□ -0.45
SPTAN1-213ENST00000627809 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
SPTAN1-213ENST00000627809 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
SPTAN1-213ENST00000627809 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
SPTAN1-213ENST00000627809 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
SPTAN1-213ENST00000627809 TRIM52Q96A61 297 aa12.23□□□□□ -0.45
SPTAN1-213ENST00000627809 SLC52A1Q9NWF4 448 aa12.23□□□□□ -0.45
SPTAN1-213ENST00000627809 NALCNQ8IZF0 1738 aa12.23□□□□□ -0.45
SPTAN1-213ENST00000627809 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
SPTAN1-213ENST00000627809 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
SPTAN1-213ENST00000627809 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
SPTAN1-213ENST00000627809 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-213ENST00000627809 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
SPTAN1-213ENST00000627809 ROBO1Q9Y6N7 1651 aa12.21□□□□□ -0.45
SPTAN1-213ENST00000627809 METP08581 1390 aa12.2□□□□□ -0.46
SPTAN1-213ENST00000627809 TMEM94Q12767 1356 aa12.2□□□□□ -0.46
SPTAN1-213ENST00000627809 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
SPTAN1-213ENST00000627809 HSPA1LP34931 641 aa12.19□□□□□ -0.46
SPTAN1-213ENST00000627809 SPATA31E1Q6ZUB1 1445 aa12.19□□□□□ -0.46
SPTAN1-213ENST00000627809 DIP2AQ14689 1571 aa12.18□□□□□ -0.46
SPTAN1-213ENST00000627809 KCNA6P17658 529 aa12.18□□□□□ -0.46
SPTAN1-213ENST00000627809 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
SPTAN1-213ENST00000627809 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
SPTAN1-213ENST00000627809 NKTRP30414 1462 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-213ENST00000627809 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-213ENST00000627809 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
SPTAN1-213ENST00000627809 MED1Q15648 1581 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-213ENST00000627809 PPP1R15AO75807 674 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-213ENST00000627809 ILDR2Q71H61 639 aa12.14□□□□□ -0.47
SPTAN1-213ENST00000627809 BCANQ96GW7 911 aa12.14□□□□□ -0.47
SPTAN1-213ENST00000627809 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
SPTAN1-213ENST00000627809 ZNF326Q5BKZ1 582 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-213ENST00000627809 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-213ENST00000627809 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
SPTAN1-213ENST00000627809 RGPD8O14715 1765 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-213ENST00000627809 TBX22Q9Y458 520 aa12.11□□□□□ -0.47
SPTAN1-213ENST00000627809 COL16A1Q07092 1604 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-213ENST00000627809 RGL3Q3MIN7 710 aa12.1□□□□□ -0.47
SPTAN1-213ENST00000627809 ROBO2Q9HCK4 1378 aa12.09□□□□□ -0.47
SPTAN1-213ENST00000627809 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
SPTAN1-213ENST00000627809 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.47
SPTAN1-213ENST00000627809 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
SPTAN1-213ENST00000627809 CCDC144AA2RUR9 1427 aa12.08□□□□□ -0.48
SPTAN1-213ENST00000627809 PLEKHH1Q9ULM0 1364 aa12.07□□□□□ -0.48
SPTAN1-213ENST00000627809 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
SPTAN1-213ENST00000627809 PIK3C2GO75747 1445 aa12.06□□□□□ -0.48
SPTAN1-213ENST00000627809 DDX17Q92841 729 aaKnown RBP12.06□□□□□ -0.48
SPTAN1-213ENST00000627809 NRXN1Q9ULB1 1477 aa12.06□□□□□ -0.48
SPTAN1-213ENST00000627809 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
SPTAN1-213ENST00000627809 MST1RQ04912 1400 aa12.05□□□□□ -0.48
SPTAN1-213ENST00000627809 TOM1O60784 492 aa12.05□□□□□ -0.48
SPTAN1-213ENST00000627809 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
SPTAN1-213ENST00000627809 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPTAN1-213ENST00000627809 LRP6O75581 1613 aa12.04□□□□□ -0.48
SPTAN1-213ENST00000627809 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-213ENST00000627809 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
SPTAN1-213ENST00000627809 ADGRB1O14514 1584 aa12.03□□□□□ -0.48
SPTAN1-213ENST00000627809 MSH6P52701 1360 aa12.03□□□□□ -0.48
SPTAN1-213ENST00000627809 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
SPTAN1-213ENST00000627809 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
SPTAN1-213ENST00000627809 AHDC1Q5TGY3 1603 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-213ENST00000627809 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
SPTAN1-213ENST00000627809 MYOM2P54296 1465 aa12.02□□□□□ -0.49
SPTAN1-213ENST00000627809 ARHGEF28Q8N1W1 1705 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-213ENST00000627809 FMN2Q9NZ56 1722 aa12.01□□□□□ -0.49
SPTAN1-213ENST00000627809 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
SPTAN1-213ENST00000627809 PRAG1Q86YV5 1406 aa12.01□□□□□ -0.49
SPTAN1-213ENST00000627809 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
SPTAN1-213ENST00000627809 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
SPTAN1-213ENST00000627809 WAPLQ7Z5K2 1190 aa12□□□□□ -0.49
SPTAN1-213ENST00000627809 SLAIN2Q9P270 581 aa12□□□□□ -0.49
SPTAN1-213ENST00000627809 RGS17Q9UGC6 210 aaPredicted RBP12□□□□□ -0.49
SPTAN1-213ENST00000627809 STK26Q9P289 416 aa11.99□□□□□ -0.49
SPTAN1-213ENST00000627809 LAMC1P11047 1609 aa11.99□□□□□ -0.49
SPTAN1-213ENST00000627809 SHPRHQ149N8 1683 aa11.99□□□□□ -0.49
SPTAN1-213ENST00000627809 BRINP3Q76B58 766 aa11.98□□□□□ -0.49
SPTAN1-213ENST00000627809 CDC42BPGQ6DT37 1551 aa11.97□□□□□ -0.49
SPTAN1-213ENST00000627809 C1orf167Q5SNV9 1468 aa11.97□□□□□ -0.49
SPTAN1-213ENST00000627809 TECPR2O15040 1411 aa11.97□□□□□ -0.49
SPTAN1-213ENST00000627809 YTHDC2Q9H6S0 1430 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-213ENST00000627809 RPGRIP1LQ68CZ1 1315 aa11.97□□□□□ -0.49
SPTAN1-213ENST00000627809 C14orf37Q86TY3 774 aa11.97□□□□□ -0.49
SPTAN1-213ENST00000627809 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-213ENST00000627809 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-213ENST00000627809 NCOA3Q9Y6Q9 1424 aa11.95□□□□□ -0.5
SPTAN1-213ENST00000627809 LRPPRCP42704 1394 aaKnown RBP11.95□□□□□ -0.5
SPTAN1-213ENST00000627809 ORAI2Q96SN7 254 aa11.95□□□□□ -0.5
SPTAN1-213ENST00000627809 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms