RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 RAB3GAP2Q9H2M9 1393 aa24.83■■□□□ 1.57
UBE3D-208ENST00000626828 MYO5BQ9ULV0 1848 aa24.83■■□□□ 1.57
UBE3D-208ENST00000626828 RIMS2Q9UQ26 1411 aa24.83■■□□□ 1.57
UBE3D-208ENST00000626828 FOXD1Q16676 465 aa24.81■■□□□ 1.56
UBE3D-208ENST00000626828 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
UBE3D-208ENST00000626828 ZNF326Q5BKZ1 582 aaKnown RBP24.8■■□□□ 1.56
UBE3D-208ENST00000626828 SLC26A8Q96RN1 970 aa24.78■■□□□ 1.56
UBE3D-208ENST00000626828 TRPM2O94759 1503 aa24.77■■□□□ 1.56
UBE3D-208ENST00000626828 NUTM2DQ5VT03 806 aaPredicted RBP24.77■■□□□ 1.56
UBE3D-208ENST00000626828 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
UBE3D-208ENST00000626828 PLEKHG1Q9ULL1 1385 aa24.76■■□□□ 1.55
UBE3D-208ENST00000626828 CPS1P31327 1500 aa24.75■■□□□ 1.55
UBE3D-208ENST00000626828 TBX22Q9Y458 520 aa24.74■■□□□ 1.55
UBE3D-208ENST00000626828 CLTCL1P53675 1640 aa24.72■■□□□ 1.55
UBE3D-208ENST00000626828 KCNA6P17658 529 aa24.72■■□□□ 1.55
UBE3D-208ENST00000626828 SENP3Q9H4L4 574 aaPredicted RBP24.72■■□□□ 1.55
UBE3D-208ENST00000626828 KIF1BO60333 1816 aa24.72■■□□□ 1.55
UBE3D-208ENST00000626828 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
UBE3D-208ENST00000626828 CCDC144AA2RUR9 1427 aa24.68■■□□□ 1.54
UBE3D-208ENST00000626828 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
UBE3D-208ENST00000626828 UBAP1LF5GYI3 381 aa24.66■■□□□ 1.54
UBE3D-208ENST00000626828 STRCP1A6NGW2 1772 aa24.64■■□□□ 1.53
UBE3D-208ENST00000626828 TOM1O60784 492 aa24.63■■□□□ 1.53
UBE3D-208ENST00000626828 PROSER2Q86WR7 435 aaPredicted RBP24.63■■□□□ 1.53
UBE3D-208ENST00000626828 LRRC7Q96NW7 1537 aa24.62■■□□□ 1.53
UBE3D-208ENST00000626828 RGL3Q3MIN7 710 aa24.62■■□□□ 1.53
UBE3D-208ENST00000626828 ADAMTS13Q76LX8 1427 aa24.61■■□□□ 1.53
UBE3D-208ENST00000626828 PIK3R4Q99570 1358 aa24.59■■□□□ 1.53
UBE3D-208ENST00000626828 NEXMIFQ5QGS0 1516 aa24.58■■□□□ 1.53
UBE3D-208ENST00000626828 ANKRD30BQ9BXX2 1392 aa24.56■■□□□ 1.52
UBE3D-208ENST00000626828 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
UBE3D-208ENST00000626828 CHD2O14647 1828 aaKnown RBP24.56■■□□□ 1.52
UBE3D-208ENST00000626828 AMOTL2Q9Y2J4 779 aa24.55■■□□□ 1.52
UBE3D-208ENST00000626828 DIP2AQ14689 1571 aa24.54■■□□□ 1.52
UBE3D-208ENST00000626828 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
UBE3D-208ENST00000626828 TMEM94Q12767 1356 aa24.53■■□□□ 1.52
UBE3D-208ENST00000626828 SETBP1Q9Y6X0 1596 aa24.52■■□□□ 1.52
UBE3D-208ENST00000626828 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
UBE3D-208ENST00000626828 PIP4K2BP78356 416 aa24.5■■□□□ 1.51
UBE3D-208ENST00000626828 RBM33Q96EV2 1170 aaKnown RBP24.5■■□□□ 1.51
UBE3D-208ENST00000626828 NWD1Q149M9 1564 aa24.49■■□□□ 1.51
UBE3D-208ENST00000626828 PPLO60437 1756 aa24.48■■□□□ 1.51
UBE3D-208ENST00000626828 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
UBE3D-208ENST00000626828 NRXN3Q9Y4C0 1643 aa24.47■■□□□ 1.51
UBE3D-208ENST00000626828 METP08581 1390 aa24.47■■□□□ 1.51
UBE3D-208ENST00000626828 ADGRF5Q8IZF2 1346 aa24.47■■□□□ 1.51
UBE3D-208ENST00000626828 XIRP1Q702N8 1843 aaKnown RBP24.46■■□□□ 1.51
UBE3D-208ENST00000626828 PTPRUQ92729 1446 aa24.45■■□□□ 1.51
UBE3D-208ENST00000626828 NCOA3Q9Y6Q9 1424 aa24.45■■□□□ 1.51
UBE3D-208ENST00000626828 C14orf37Q86TY3 774 aa24.43■■□□□ 1.5
UBE3D-208ENST00000626828 STAC3Q96MF2 364 aa24.42■■□□□ 1.5
UBE3D-208ENST00000626828 MSH6P52701 1360 aa24.42■■□□□ 1.5
UBE3D-208ENST00000626828 C19orf44Q9H6X5 657 aa24.41■■□□□ 1.5
UBE3D-208ENST00000626828 ALKQ9UM73 1620 aa24.4■■□□□ 1.5
UBE3D-208ENST00000626828 DCAF11Q8TEB1 546 aa24.37■■□□□ 1.49
UBE3D-208ENST00000626828 IFT172Q9UG01 1749 aa24.36■■□□□ 1.49
UBE3D-208ENST00000626828 C14orf93Q9H972 538 aaKnown RBP24.36■■□□□ 1.49
UBE3D-208ENST00000626828 SLAIN2Q9P270 581 aa24.36■■□□□ 1.49
UBE3D-208ENST00000626828 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
UBE3D-208ENST00000626828 ATF3P18847 181 aa24.35■■□□□ 1.49
UBE3D-208ENST00000626828 CADPS2Q86UW7 1296 aa24.35■■□□□ 1.49
UBE3D-208ENST00000626828 HSPA1LP34931 641 aa24.33■■□□□ 1.49
UBE3D-208ENST00000626828 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
UBE3D-208ENST00000626828 TMEM132EQ6IEE7 984 aa24.32■■□□□ 1.48
UBE3D-208ENST00000626828 PIK3C2GO75747 1445 aa24.32■■□□□ 1.48
UBE3D-208ENST00000626828 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
UBE3D-208ENST00000626828 SETD1AO15047 1707 aaKnown RBP24.31■■□□□ 1.48
UBE3D-208ENST00000626828 CFAP70Q5T0N1 1121 aa24.31■■□□□ 1.48
UBE3D-208ENST00000626828 MYOM2P54296 1465 aa24.31■■□□□ 1.48
UBE3D-208ENST00000626828 STK26Q9P289 416 aa24.3■■□□□ 1.48
UBE3D-208ENST00000626828 NRXN1Q9ULB1 1477 aa24.29■■□□□ 1.48
UBE3D-208ENST00000626828 DHX57Q6P158 1386 aaKnown RBP24.28■■□□□ 1.48
UBE3D-208ENST00000626828 LRPPRCP42704 1394 aaKnown RBP24.27■■□□□ 1.48
UBE3D-208ENST00000626828 ABCC11Q96J66 1382 aa24.27■■□□□ 1.48
UBE3D-208ENST00000626828 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
UBE3D-208ENST00000626828 PTCH1Q13635 1447 aa24.26■■□□□ 1.47
UBE3D-208ENST00000626828 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.25■■□□□ 1.47
UBE3D-208ENST00000626828 SIRT1Q96EB6 747 aa24.25■■□□□ 1.47
UBE3D-208ENST00000626828 PRAG1Q86YV5 1406 aa24.25■■□□□ 1.47
UBE3D-208ENST00000626828 SIN3AQ96ST3 1273 aa24.24■■□□□ 1.47
UBE3D-208ENST00000626828 DCCP43146 1447 aa24.22■■□□□ 1.47
UBE3D-208ENST00000626828 YTHDC2Q9H6S0 1430 aaKnown RBP24.21■■□□□ 1.47
UBE3D-208ENST00000626828 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
UBE3D-208ENST00000626828 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
UBE3D-208ENST00000626828 WAPLQ7Z5K2 1190 aa24.21■■□□□ 1.47
UBE3D-208ENST00000626828 TECPR2O15040 1411 aa24.19■■□□□ 1.46
UBE3D-208ENST00000626828 LAMC1P11047 1609 aa24.17■■□□□ 1.46
UBE3D-208ENST00000626828 L3MBTL2Q969R5 705 aa24.17■■□□□ 1.46
UBE3D-208ENST00000626828 ROBO1Q9Y6N7 1651 aa24.16■■□□□ 1.46
UBE3D-208ENST00000626828 ASXL1Q8IXJ9 1541 aa24.15■■□□□ 1.46
UBE3D-208ENST00000626828 BRINP3Q76B58 766 aa24.13■■□□□ 1.45
UBE3D-208ENST00000626828 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
UBE3D-208ENST00000626828 POGKQ9P215 609 aa24.13■■□□□ 1.45
UBE3D-208ENST00000626828 TRAK1Q9UPV9 953 aa24.12■■□□□ 1.45
UBE3D-208ENST00000626828 MST1RQ04912 1400 aa24.11■■□□□ 1.45
UBE3D-208ENST00000626828 KNDC1Q76NI1 1749 aa24.1■■□□□ 1.45
UBE3D-208ENST00000626828 NALCNQ8IZF0 1738 aa24.1■■□□□ 1.45
UBE3D-208ENST00000626828 PRAM1Q96QH2 718 aa24.1■■□□□ 1.45
UBE3D-208ENST00000626828 PLEKHH1Q9ULM0 1364 aa24.1■■□□□ 1.45
UBE3D-208ENST00000626828 ADGRB1O14514 1584 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms