RNA–Protein interactions for RNA: ENST00000625044.1

PCDHB16-202, Transcript of protocadherin beta 16, humanhuman

TSL 2

Gene PCDHB16, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-202ENST00000625044 CLTCL1P53675 1640 aa30■■■□□ 2.39
PCDHB16-202ENST00000625044 FOXD1Q16676 465 aa29.99■■■□□ 2.39
PCDHB16-202ENST00000625044 HDGFP51858 240 aaKnown RBP29.97■■■□□ 2.39
PCDHB16-202ENST00000625044 IQSEC2Q5JU85 1478 aa29.95■■■□□ 2.39
PCDHB16-202ENST00000625044 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.95■■■□□ 2.39
PCDHB16-202ENST00000625044 CPS1P31327 1500 aa29.95■■■□□ 2.38
PCDHB16-202ENST00000625044 PLEKHG1Q9ULL1 1385 aa29.94■■■□□ 2.38
PCDHB16-202ENST00000625044 PPP1R15AO75807 674 aaPredicted RBP29.94■■■□□ 2.38
PCDHB16-202ENST00000625044 NUTM2DQ5VT03 806 aaPredicted RBP29.93■■■□□ 2.38
PCDHB16-202ENST00000625044 SLC26A8Q96RN1 970 aa29.92■■■□□ 2.38
PCDHB16-202ENST00000625044 SENP3Q9H4L4 574 aaPredicted RBP29.91■■■□□ 2.38
PCDHB16-202ENST00000625044 BCANQ96GW7 911 aa29.9■■■□□ 2.38
PCDHB16-202ENST00000625044 STRCP1A6NGW2 1772 aa29.9■■■□□ 2.38
PCDHB16-202ENST00000625044 ZNF326Q5BKZ1 582 aaKnown RBP29.89■■■□□ 2.38
PCDHB16-202ENST00000625044 HRCP23327 699 aa29.88■■■□□ 2.37
PCDHB16-202ENST00000625044 KIF1BO60333 1816 aa29.85■■■□□ 2.37
PCDHB16-202ENST00000625044 CCDC144AA2RUR9 1427 aa29.83■■■□□ 2.37
PCDHB16-202ENST00000625044 LRRC7Q96NW7 1537 aa29.82■■■□□ 2.36
PCDHB16-202ENST00000625044 NEXMIFQ5QGS0 1516 aa29.81■■■□□ 2.36
PCDHB16-202ENST00000625044 ADAMTS13Q76LX8 1427 aa29.81■■■□□ 2.36
PCDHB16-202ENST00000625044 KCNA6P17658 529 aa29.8■■■□□ 2.36
PCDHB16-202ENST00000625044 TBX22Q9Y458 520 aa29.8■■■□□ 2.36
PCDHB16-202ENST00000625044 UBAP1LF5GYI3 381 aa29.75■■■□□ 2.35
PCDHB16-202ENST00000625044 DIP2AQ14689 1571 aa29.75■■■□□ 2.35
PCDHB16-202ENST00000625044 SPATA31E1Q6ZUB1 1445 aa29.74■■■□□ 2.35
PCDHB16-202ENST00000625044 RPGRIP1LQ68CZ1 1315 aa29.73■■■□□ 2.35
PCDHB16-202ENST00000625044 NWD1Q149M9 1564 aa29.73■■■□□ 2.35
PCDHB16-202ENST00000625044 SETBP1Q9Y6X0 1596 aa29.73■■■□□ 2.35
PCDHB16-202ENST00000625044 NRXN3Q9Y4C0 1643 aa29.72■■■□□ 2.35
PCDHB16-202ENST00000625044 NKTRP30414 1462 aaKnown RBP29.7■■■□□ 2.35
PCDHB16-202ENST00000625044 VGFO15240 615 aaPredicted RBP29.7■■■□□ 2.35
PCDHB16-202ENST00000625044 ANKRD30BQ9BXX2 1392 aa29.69■■■□□ 2.34
PCDHB16-202ENST00000625044 PIK3R4Q99570 1358 aa29.68■■■□□ 2.34
PCDHB16-202ENST00000625044 RGL3Q3MIN7 710 aa29.68■■■□□ 2.34
PCDHB16-202ENST00000625044 CHD2O14647 1828 aaKnown RBP29.68■■■□□ 2.34
PCDHB16-202ENST00000625044 TMEM94Q12767 1356 aa29.67■■■□□ 2.34
PCDHB16-202ENST00000625044 PROSER2Q86WR7 435 aaPredicted RBP29.66■■■□□ 2.34
PCDHB16-202ENST00000625044 PPLO60437 1756 aa29.65■■■□□ 2.34
PCDHB16-202ENST00000625044 XIRP1Q702N8 1843 aaKnown RBP29.64■■■□□ 2.34
PCDHB16-202ENST00000625044 TOM1O60784 492 aa29.64■■■□□ 2.34
PCDHB16-202ENST00000625044 RBM33Q96EV2 1170 aaKnown RBP29.64■■■□□ 2.34
PCDHB16-202ENST00000625044 PTPRUQ92729 1446 aa29.63■■■□□ 2.33
PCDHB16-202ENST00000625044 ALKQ9UM73 1620 aa29.63■■■□□ 2.33
PCDHB16-202ENST00000625044 METP08581 1390 aa29.63■■■□□ 2.33
PCDHB16-202ENST00000625044 AMOTL2Q9Y2J4 779 aa29.6■■■□□ 2.33
PCDHB16-202ENST00000625044 ADGRF5Q8IZF2 1346 aa29.58■■■□□ 2.33
PCDHB16-202ENST00000625044 PIP4K2BP78356 416 aa29.57■■■□□ 2.32
PCDHB16-202ENST00000625044 TRIM26Q12899 539 aaPredicted RBP29.56■■■□□ 2.32
PCDHB16-202ENST00000625044 IFT172Q9UG01 1749 aa29.56■■■□□ 2.32
PCDHB16-202ENST00000625044 SCAF1Q9H7N4 1312 aaKnown RBP29.54■■■□□ 2.32
PCDHB16-202ENST00000625044 XRN1Q8IZH2 1706 aaKnown RBP29.54■■■□□ 2.32
PCDHB16-202ENST00000625044 SETD1AO15047 1707 aaKnown RBP29.52■■■□□ 2.32
PCDHB16-202ENST00000625044 NCOA3Q9Y6Q9 1424 aa29.51■■■□□ 2.31
PCDHB16-202ENST00000625044 MSH6P52701 1360 aa29.49■■■□□ 2.31
PCDHB16-202ENST00000625044 PIK3C2GO75747 1445 aa29.48■■■□□ 2.31
PCDHB16-202ENST00000625044 MYOM2P54296 1465 aa29.46■■■□□ 2.31
PCDHB16-202ENST00000625044 NRXN1Q9ULB1 1477 aa29.45■■■□□ 2.31
PCDHB16-202ENST00000625044 C14orf37Q86TY3 774 aa29.44■■■□□ 2.3
PCDHB16-202ENST00000625044 HSPA1LP34931 641 aa29.41■■■□□ 2.3
PCDHB16-202ENST00000625044 C19orf44Q9H6X5 657 aa29.41■■■□□ 2.3
PCDHB16-202ENST00000625044 PRAG1Q86YV5 1406 aa29.4■■■□□ 2.3
PCDHB16-202ENST00000625044 ROBO2Q9HCK4 1378 aa29.39■■■□□ 2.3
PCDHB16-202ENST00000625044 PTCH1Q13635 1447 aa29.39■■■□□ 2.3
PCDHB16-202ENST00000625044 DHX57Q6P158 1386 aaKnown RBP29.38■■■□□ 2.29
PCDHB16-202ENST00000625044 ASXL1Q8IXJ9 1541 aa29.37■■■□□ 2.29
PCDHB16-202ENST00000625044 DCAF11Q8TEB1 546 aa29.37■■■□□ 2.29
PCDHB16-202ENST00000625044 C14orf93Q9H972 538 aaKnown RBP29.37■■■□□ 2.29
PCDHB16-202ENST00000625044 FAM135BQ49AJ0 1406 aa29.37■■■□□ 2.29
PCDHB16-202ENST00000625044 SLAIN2Q9P270 581 aa29.36■■■□□ 2.29
PCDHB16-202ENST00000625044 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.36■■■□□ 2.29
PCDHB16-202ENST00000625044 TMEM132EQ6IEE7 984 aa29.35■■■□□ 2.29
PCDHB16-202ENST00000625044 KDM2AQ9Y2K7 1162 aa29.35■■■□□ 2.29
PCDHB16-202ENST00000625044 CFAP70Q5T0N1 1121 aa29.34■■■□□ 2.29
PCDHB16-202ENST00000625044 CADPS2Q86UW7 1296 aa29.34■■■□□ 2.29
PCDHB16-202ENST00000625044 ATF3P18847 181 aa29.33■■■□□ 2.29
PCDHB16-202ENST00000625044 LRPPRCP42704 1394 aaKnown RBP29.33■■■□□ 2.29
PCDHB16-202ENST00000625044 DCCP43146 1447 aa29.32■■■□□ 2.28
PCDHB16-202ENST00000625044 ADGRL3Q9HAR2 1447 aa29.32■■■□□ 2.28
PCDHB16-202ENST00000625044 STAC3Q96MF2 364 aa29.32■■■□□ 2.28
PCDHB16-202ENST00000625044 STK26Q9P289 416 aa29.31■■■□□ 2.28
PCDHB16-202ENST00000625044 TECPR2O15040 1411 aa29.3■■■□□ 2.28
PCDHB16-202ENST00000625044 LAMC1P11047 1609 aa29.3■■■□□ 2.28
PCDHB16-202ENST00000625044 ABCC11Q96J66 1382 aa29.29■■■□□ 2.28
PCDHB16-202ENST00000625044 YTHDC2Q9H6S0 1430 aaKnown RBP29.28■■■□□ 2.28
PCDHB16-202ENST00000625044 ROBO1Q9Y6N7 1651 aa29.28■■■□□ 2.28
PCDHB16-202ENST00000625044 NALCNQ8IZF0 1738 aa29.27■■■□□ 2.28
PCDHB16-202ENST00000625044 SIN3AQ96ST3 1273 aa29.25■■■□□ 2.27
PCDHB16-202ENST00000625044 KNDC1Q76NI1 1749 aa29.23■■■□□ 2.27
PCDHB16-202ENST00000625044 WAPLQ7Z5K2 1190 aa29.22■■■□□ 2.27
PCDHB16-202ENST00000625044 ADGRB1O14514 1584 aa29.22■■■□□ 2.27
PCDHB16-202ENST00000625044 MST1RQ04912 1400 aa29.21■■■□□ 2.27
PCDHB16-202ENST00000625044 PLEKHH1Q9ULM0 1364 aa29.19■■■□□ 2.26
PCDHB16-202ENST00000625044 SIRT1Q96EB6 747 aa29.18■■■□□ 2.26
PCDHB16-202ENST00000625044 NEUROD1Q13562 356 aa29.17■■■□□ 2.26
PCDHB16-202ENST00000625044 BRINP3Q76B58 766 aa29.16■■■□□ 2.26
PCDHB16-202ENST00000625044 L3MBTL2Q969R5 705 aa29.15■■■□□ 2.26
PCDHB16-202ENST00000625044 DLC1Q96QB1 1528 aa29.12■■■□□ 2.25
PCDHB16-202ENST00000625044 CDC42BPGQ6DT37 1551 aa29.11■■■□□ 2.25
PCDHB16-202ENST00000625044 PRAM1Q96QH2 718 aa29.11■■■□□ 2.25
PCDHB16-202ENST00000625044 C1orf167Q5SNV9 1468 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms