RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 TRIM52Q96A61 297 aa31.51■■■□□ 2.63
PCDHB4-202ENST00000623478 PPP1R15AO75807 674 aaPredicted RBP31.49■■■□□ 2.63
PCDHB4-202ENST00000623478 PLEKHG1Q9ULL1 1385 aa31.48■■■□□ 2.63
PCDHB4-202ENST00000623478 BCANQ96GW7 911 aa31.48■■■□□ 2.63
PCDHB4-202ENST00000623478 NUTM2DQ5VT03 806 aaPredicted RBP31.47■■■□□ 2.63
PCDHB4-202ENST00000623478 TRPM2O94759 1503 aa31.46■■■□□ 2.63
PCDHB4-202ENST00000623478 CLTCL1P53675 1640 aa31.46■■■□□ 2.63
PCDHB4-202ENST00000623478 ALKQ9UM73 1620 aa31.46■■■□□ 2.63
PCDHB4-202ENST00000623478 TOM1O60784 492 aa31.43■■■□□ 2.62
PCDHB4-202ENST00000623478 HDGFP51858 240 aaKnown RBP31.43■■■□□ 2.62
PCDHB4-202ENST00000623478 PIP4K2BP78356 416 aa31.43■■■□□ 2.62
PCDHB4-202ENST00000623478 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.42■■■□□ 2.62
PCDHB4-202ENST00000623478 SCAF1Q9H7N4 1312 aaKnown RBP31.42■■■□□ 2.62
PCDHB4-202ENST00000623478 XIRP1Q702N8 1843 aaKnown RBP31.41■■■□□ 2.62
PCDHB4-202ENST00000623478 KCNA6P17658 529 aa31.4■■■□□ 2.62
PCDHB4-202ENST00000623478 SLC4A1APQ9BWU0 796 aaKnown RBP31.4■■■□□ 2.62
PCDHB4-202ENST00000623478 NWD1Q149M9 1564 aa31.39■■■□□ 2.62
PCDHB4-202ENST00000623478 ADAMTS13Q76LX8 1427 aa31.35■■■□□ 2.61
PCDHB4-202ENST00000623478 TMEM94Q12767 1356 aa31.34■■■□□ 2.61
PCDHB4-202ENST00000623478 NKTRP30414 1462 aaKnown RBP31.33■■■□□ 2.61
PCDHB4-202ENST00000623478 ZNF326Q5BKZ1 582 aaKnown RBP31.33■■■□□ 2.61
PCDHB4-202ENST00000623478 RBM33Q96EV2 1170 aaKnown RBP31.32■■■□□ 2.6
PCDHB4-202ENST00000623478 FOXD1Q16676 465 aa31.31■■■□□ 2.6
PCDHB4-202ENST00000623478 DIP2AQ14689 1571 aa31.3■■■□□ 2.6
PCDHB4-202ENST00000623478 TBX22Q9Y458 520 aa31.3■■■□□ 2.6
PCDHB4-202ENST00000623478 CHD2O14647 1828 aaKnown RBP31.3■■■□□ 2.6
PCDHB4-202ENST00000623478 KIF1BO60333 1816 aa31.3■■■□□ 2.6
PCDHB4-202ENST00000623478 PROSER2Q86WR7 435 aaPredicted RBP31.29■■■□□ 2.6
PCDHB4-202ENST00000623478 NEXMIFQ5QGS0 1516 aa31.29■■■□□ 2.6
PCDHB4-202ENST00000623478 HSPA1LP34931 641 aa31.28■■■□□ 2.6
PCDHB4-202ENST00000623478 NRXN3Q9Y4C0 1643 aa31.27■■■□□ 2.6
PCDHB4-202ENST00000623478 SETD5Q9C0A6 1442 aa31.26■■■□□ 2.6
PCDHB4-202ENST00000623478 MPHOSPH9Q99550 1183 aa31.24■■■□□ 2.59
PCDHB4-202ENST00000623478 SETBP1Q9Y6X0 1596 aa31.24■■■□□ 2.59
PCDHB4-202ENST00000623478 PIK3R4Q99570 1358 aa31.2■■■□□ 2.59
PCDHB4-202ENST00000623478 PTPRUQ92729 1446 aa31.18■■■□□ 2.58
PCDHB4-202ENST00000623478 RAB3GAP2Q9H2M9 1393 aa31.17■■■□□ 2.58
PCDHB4-202ENST00000623478 DISP3Q9P2K9 1392 aa31.15■■■□□ 2.58
PCDHB4-202ENST00000623478 CCDC144AA2RUR9 1427 aa31.14■■■□□ 2.58
PCDHB4-202ENST00000623478 METP08581 1390 aa31.13■■■□□ 2.57
PCDHB4-202ENST00000623478 MSH6P52701 1360 aa31.13■■■□□ 2.57
PCDHB4-202ENST00000623478 AMOTL2Q9Y2J4 779 aa31.12■■■□□ 2.57
PCDHB4-202ENST00000623478 XRN1Q8IZH2 1706 aaKnown RBP31.12■■■□□ 2.57
PCDHB4-202ENST00000623478 PPLO60437 1756 aa31.1■■■□□ 2.57
PCDHB4-202ENST00000623478 ACIN1Q9UKV3 1341 aaKnown RBP31.09■■■□□ 2.57
PCDHB4-202ENST00000623478 RPGRIP1LQ68CZ1 1315 aa31.07■■■□□ 2.56
PCDHB4-202ENST00000623478 FAM135BQ49AJ0 1406 aa31.07■■■□□ 2.56
PCDHB4-202ENST00000623478 SPATA31E1Q6ZUB1 1445 aa31.07■■■□□ 2.56
PCDHB4-202ENST00000623478 NCOA3Q9Y6Q9 1424 aa31.07■■■□□ 2.56
PCDHB4-202ENST00000623478 VGFO15240 615 aaPredicted RBP31.06■■■□□ 2.56
PCDHB4-202ENST00000623478 C14orf37Q86TY3 774 aa31.06■■■□□ 2.56
PCDHB4-202ENST00000623478 ROBO1Q9Y6N7 1651 aa31.06■■■□□ 2.56
PCDHB4-202ENST00000623478 SETD1AO15047 1707 aaKnown RBP31.04■■■□□ 2.56
PCDHB4-202ENST00000623478 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.01■■■□□ 2.56
PCDHB4-202ENST00000623478 RGL3Q3MIN7 710 aa31.01■■■□□ 2.55
PCDHB4-202ENST00000623478 SLAIN2Q9P270 581 aa31■■■□□ 2.55
PCDHB4-202ENST00000623478 MED1Q15648 1581 aaPredicted RBP30.99■■■□□ 2.55
PCDHB4-202ENST00000623478 IFT172Q9UG01 1749 aa30.98■■■□□ 2.55
PCDHB4-202ENST00000623478 C19orf44Q9H6X5 657 aa30.97■■■□□ 2.55
PCDHB4-202ENST00000623478 ADGRF5Q8IZF2 1346 aa30.95■■■□□ 2.54
PCDHB4-202ENST00000623478 ATF3P18847 181 aa30.92■■■□□ 2.54
PCDHB4-202ENST00000623478 CADPS2Q86UW7 1296 aa30.92■■■□□ 2.54
PCDHB4-202ENST00000623478 ANKRD30BQ9BXX2 1392 aa30.92■■■□□ 2.54
PCDHB4-202ENST00000623478 ILDR2Q71H61 639 aa30.9■■■□□ 2.54
PCDHB4-202ENST00000623478 DCCP43146 1447 aa30.89■■■□□ 2.53
PCDHB4-202ENST00000623478 PTCH1Q13635 1447 aa30.89■■■□□ 2.53
PCDHB4-202ENST00000623478 NALCNQ8IZF0 1738 aa30.88■■■□□ 2.53
PCDHB4-202ENST00000623478 ROBO2Q9HCK4 1378 aa30.88■■■□□ 2.53
PCDHB4-202ENST00000623478 HRCP23327 699 aa30.87■■■□□ 2.53
PCDHB4-202ENST00000623478 ADGRL3Q9HAR2 1447 aa30.87■■■□□ 2.53
PCDHB4-202ENST00000623478 PHLPP1O60346 1717 aa30.85■■■□□ 2.53
PCDHB4-202ENST00000623478 PIK3C2GO75747 1445 aa30.85■■■□□ 2.53
PCDHB4-202ENST00000623478 PRAG1Q86YV5 1406 aa30.85■■■□□ 2.53
PCDHB4-202ENST00000623478 ASXL1Q8IXJ9 1541 aa30.82■■■□□ 2.52
PCDHB4-202ENST00000623478 MST1RQ04912 1400 aa30.81■■■□□ 2.52
PCDHB4-202ENST00000623478 COL16A1Q07092 1604 aaPredicted RBP30.79■■■□□ 2.52
PCDHB4-202ENST00000623478 MYOM2P54296 1465 aa30.78■■■□□ 2.52
PCDHB4-202ENST00000623478 NRXN1Q9ULB1 1477 aa30.77■■■□□ 2.52
PCDHB4-202ENST00000623478 BRINP3Q76B58 766 aa30.77■■■□□ 2.52
PCDHB4-202ENST00000623478 AHDC1Q5TGY3 1603 aaPredicted RBP30.76■■■□□ 2.51
PCDHB4-202ENST00000623478 TMEM132EQ6IEE7 984 aa30.75■■■□□ 2.51
PCDHB4-202ENST00000623478 STK26Q9P289 416 aa30.74■■■□□ 2.51
PCDHB4-202ENST00000623478 PHF23Q9BUL5 403 aaPredicted RBP30.73■■■□□ 2.51
PCDHB4-202ENST00000623478 LRPPRCP42704 1394 aaKnown RBP30.73■■■□□ 2.51
PCDHB4-202ENST00000623478 TECPR2O15040 1411 aa30.72■■■□□ 2.51
PCDHB4-202ENST00000623478 KNDC1Q76NI1 1749 aa30.7■■■□□ 2.5
PCDHB4-202ENST00000623478 JCADQ9P266 1359 aa30.69■■■□□ 2.5
PCDHB4-202ENST00000623478 LAMC1P11047 1609 aa30.69■■■□□ 2.5
PCDHB4-202ENST00000623478 YTHDC2Q9H6S0 1430 aaKnown RBP30.68■■■□□ 2.5
PCDHB4-202ENST00000623478 C14orf93Q9H972 538 aaKnown RBP30.68■■■□□ 2.5
PCDHB4-202ENST00000623478 CFAP70Q5T0N1 1121 aa30.67■■■□□ 2.5
PCDHB4-202ENST00000623478 C1orf167Q5SNV9 1468 aa30.67■■■□□ 2.5
PCDHB4-202ENST00000623478 ABCC11Q96J66 1382 aa30.66■■■□□ 2.5
PCDHB4-202ENST00000623478 NHSL1Q5SYE7 1610 aa30.65■■■□□ 2.5
PCDHB4-202ENST00000623478 WAPLQ7Z5K2 1190 aa30.65■■■□□ 2.5
PCDHB4-202ENST00000623478 PLEKHH1Q9ULM0 1364 aa30.65■■■□□ 2.5
PCDHB4-202ENST00000623478 CDC42BPGQ6DT37 1551 aa30.63■■■□□ 2.49
PCDHB4-202ENST00000623478 DCAF11Q8TEB1 546 aa30.61■■■□□ 2.49
PCDHB4-202ENST00000623478 DDX17Q92841 729 aaKnown RBP30.61■■■□□ 2.49
PCDHB4-202ENST00000623478 KDM2AQ9Y2K7 1162 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms