RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 CHGAP10645 457 aaKnown RBP29.28■■■□□ 2.28
LTBP4-239ENST00000622565 SCAF1Q9H7N4 1312 aaKnown RBP29.27■■■□□ 2.28
LTBP4-239ENST00000622565 HFM1A2PYH4 1435 aa29.25■■■□□ 2.27
LTBP4-239ENST00000622565 PLEKHG1Q9ULL1 1385 aa29.25■■■□□ 2.27
LTBP4-239ENST00000622565 XIRP1Q702N8 1843 aaKnown RBP29.24■■■□□ 2.27
LTBP4-239ENST00000622565 KCNA6P17658 529 aa29.22■■■□□ 2.27
LTBP4-239ENST00000622565 NUTM2DQ5VT03 806 aaPredicted RBP29.22■■■□□ 2.27
LTBP4-239ENST00000622565 SPHKAPQ2M3C7 1700 aa29.22■■■□□ 2.27
LTBP4-239ENST00000622565 HSPA1LP34931 641 aa29.21■■■□□ 2.27
LTBP4-239ENST00000622565 BCANQ96GW7 911 aa29.2■■■□□ 2.26
LTBP4-239ENST00000622565 PPP1R15AO75807 674 aaPredicted RBP29.19■■■□□ 2.26
LTBP4-239ENST00000622565 NWD1Q149M9 1564 aa29.18■■■□□ 2.26
LTBP4-239ENST00000622565 RBM33Q96EV2 1170 aaKnown RBP29.17■■■□□ 2.26
LTBP4-239ENST00000622565 TMEM94Q12767 1356 aa29.16■■■□□ 2.26
LTBP4-239ENST00000622565 DISP3Q9P2K9 1392 aa29.16■■■□□ 2.26
LTBP4-239ENST00000622565 HDGFP51858 240 aaKnown RBP29.16■■■□□ 2.26
LTBP4-239ENST00000622565 ADAMTS13Q76LX8 1427 aa29.15■■■□□ 2.26
LTBP4-239ENST00000622565 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.15■■■□□ 2.26
LTBP4-239ENST00000622565 CLTCL1P53675 1640 aa29.14■■■□□ 2.26
LTBP4-239ENST00000622565 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
LTBP4-239ENST00000622565 TRPM2O94759 1503 aa29.12■■■□□ 2.25
LTBP4-239ENST00000622565 PROSER2Q86WR7 435 aaPredicted RBP29.12■■■□□ 2.25
LTBP4-239ENST00000622565 NKTRP30414 1462 aaKnown RBP29.11■■■□□ 2.25
LTBP4-239ENST00000622565 TBX22Q9Y458 520 aa29.11■■■□□ 2.25
LTBP4-239ENST00000622565 CHD2O14647 1828 aaKnown RBP29.08■■■□□ 2.25
LTBP4-239ENST00000622565 DIP2AQ14689 1571 aa29.05■■■□□ 2.24
LTBP4-239ENST00000622565 ILDR2Q71H61 639 aa29.04■■■□□ 2.24
LTBP4-239ENST00000622565 SLC4A1APQ9BWU0 796 aaKnown RBP29.04■■■□□ 2.24
LTBP4-239ENST00000622565 NRXN3Q9Y4C0 1643 aa29.04■■■□□ 2.24
LTBP4-239ENST00000622565 ZNF326Q5BKZ1 582 aaKnown RBP29.03■■■□□ 2.24
LTBP4-239ENST00000622565 NEXMIFQ5QGS0 1516 aa29.01■■■□□ 2.23
LTBP4-239ENST00000622565 PTPRUQ92729 1446 aa29.01■■■□□ 2.23
LTBP4-239ENST00000622565 FOXD1Q16676 465 aa28.99■■■□□ 2.23
LTBP4-239ENST00000622565 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
LTBP4-239ENST00000622565 PIK3R4Q99570 1358 aa28.98■■■□□ 2.23
LTBP4-239ENST00000622565 FAM135BQ49AJ0 1406 aa28.95■■■□□ 2.23
LTBP4-239ENST00000622565 KIF1BO60333 1816 aa28.94■■■□□ 2.22
LTBP4-239ENST00000622565 MED1Q15648 1581 aaPredicted RBP28.94■■■□□ 2.22
LTBP4-239ENST00000622565 MSH6P52701 1360 aa28.94■■■□□ 2.22
LTBP4-239ENST00000622565 AMOTL2Q9Y2J4 779 aa28.93■■■□□ 2.22
LTBP4-239ENST00000622565 METP08581 1390 aa28.91■■■□□ 2.22
LTBP4-239ENST00000622565 ROBO1Q9Y6N7 1651 aa28.91■■■□□ 2.22
LTBP4-239ENST00000622565 NCOA3Q9Y6Q9 1424 aa28.89■■■□□ 2.22
LTBP4-239ENST00000622565 MPHOSPH9Q99550 1183 aa28.89■■■□□ 2.22
LTBP4-239ENST00000622565 XRN1Q8IZH2 1706 aaKnown RBP28.89■■■□□ 2.21
LTBP4-239ENST00000622565 SLAIN2Q9P270 581 aa28.86■■■□□ 2.21
LTBP4-239ENST00000622565 SETD5Q9C0A6 1442 aa28.86■■■□□ 2.21
LTBP4-239ENST00000622565 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.83■■■□□ 2.21
LTBP4-239ENST00000622565 C14orf37Q86TY3 774 aa28.82■■■□□ 2.2
LTBP4-239ENST00000622565 C19orf44Q9H6X5 657 aa28.8■■■□□ 2.2
LTBP4-239ENST00000622565 SETD1AO15047 1707 aaKnown RBP28.8■■■□□ 2.2
LTBP4-239ENST00000622565 RPGRIP1LQ68CZ1 1315 aa28.79■■■□□ 2.2
LTBP4-239ENST00000622565 VGFO15240 615 aaPredicted RBP28.79■■■□□ 2.2
LTBP4-239ENST00000622565 PPLO60437 1756 aa28.79■■■□□ 2.2
LTBP4-239ENST00000622565 CCDC144AA2RUR9 1427 aa28.78■■■□□ 2.2
LTBP4-239ENST00000622565 RAB3GAP2Q9H2M9 1393 aa28.78■■■□□ 2.2
LTBP4-239ENST00000622565 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
LTBP4-239ENST00000622565 CADPS2Q86UW7 1296 aa28.74■■■□□ 2.19
LTBP4-239ENST00000622565 ATF3P18847 181 aa28.73■■■□□ 2.19
LTBP4-239ENST00000622565 RGL3Q3MIN7 710 aa28.73■■■□□ 2.19
LTBP4-239ENST00000622565 ADGRF5Q8IZF2 1346 aa28.71■■■□□ 2.19
LTBP4-239ENST00000622565 PHLPP1O60346 1717 aa28.71■■■□□ 2.19
LTBP4-239ENST00000622565 SOCS7O14512 581 aa28.69■■■□□ 2.18
LTBP4-239ENST00000622565 DCCP43146 1447 aa28.69■■■□□ 2.18
LTBP4-239ENST00000622565 IFT172Q9UG01 1749 aa28.68■■■□□ 2.18
LTBP4-239ENST00000622565 COL16A1Q07092 1604 aaPredicted RBP28.68■■■□□ 2.18
LTBP4-239ENST00000622565 ROBO2Q9HCK4 1378 aa28.67■■■□□ 2.18
LTBP4-239ENST00000622565 NALCNQ8IZF0 1738 aa28.67■■■□□ 2.18
LTBP4-239ENST00000622565 ADGRL3Q9HAR2 1447 aa28.67■■■□□ 2.18
LTBP4-239ENST00000622565 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
LTBP4-239ENST00000622565 MST1RQ04912 1400 aa28.66■■■□□ 2.18
LTBP4-239ENST00000622565 BRINP3Q76B58 766 aa28.65■■■□□ 2.18
LTBP4-239ENST00000622565 PHF23Q9BUL5 403 aaPredicted RBP28.65■■■□□ 2.18
LTBP4-239ENST00000622565 PTCH1Q13635 1447 aa28.65■■■□□ 2.18
LTBP4-239ENST00000622565 PRAG1Q86YV5 1406 aa28.63■■■□□ 2.17
LTBP4-239ENST00000622565 AHDC1Q5TGY3 1603 aaPredicted RBP28.63■■■□□ 2.17
LTBP4-239ENST00000622565 RGS17Q9UGC6 210 aaPredicted RBP28.63■■■□□ 2.17
LTBP4-239ENST00000622565 ANKRD30BQ9BXX2 1392 aa28.62■■■□□ 2.17
LTBP4-239ENST00000622565 ASXL1Q8IXJ9 1541 aa28.59■■■□□ 2.17
LTBP4-239ENST00000622565 JCADQ9P266 1359 aa28.59■■■□□ 2.17
LTBP4-239ENST00000622565 PIK3C2GO75747 1445 aa28.58■■■□□ 2.17
LTBP4-239ENST00000622565 TMEM132EQ6IEE7 984 aa28.54■■■□□ 2.16
LTBP4-239ENST00000622565 NHSL1Q5SYE7 1610 aa28.51■■■□□ 2.15
LTBP4-239ENST00000622565 HRCP23327 699 aa28.51■■■□□ 2.15
LTBP4-239ENST00000622565 DDX17Q92841 729 aaKnown RBP28.51■■■□□ 2.15
LTBP4-239ENST00000622565 STK26Q9P289 416 aa28.51■■■□□ 2.15
LTBP4-239ENST00000622565 C1orf167Q5SNV9 1468 aa28.51■■■□□ 2.15
LTBP4-239ENST00000622565 NRXN1Q9ULB1 1477 aa28.51■■■□□ 2.15
LTBP4-239ENST00000622565 LRP6O75581 1613 aa28.51■■■□□ 2.15
LTBP4-239ENST00000622565 LRPPRCP42704 1394 aaKnown RBP28.5■■■□□ 2.15
LTBP4-239ENST00000622565 TECPR2O15040 1411 aa28.49■■■□□ 2.15
LTBP4-239ENST00000622565 MYOM2P54296 1465 aa28.48■■■□□ 2.15
LTBP4-239ENST00000622565 WAPLQ7Z5K2 1190 aa28.47■■■□□ 2.15
LTBP4-239ENST00000622565 SHPRHQ149N8 1683 aa28.47■■■□□ 2.15
LTBP4-239ENST00000622565 C14orf93Q9H972 538 aaKnown RBP28.46■■■□□ 2.15
LTBP4-239ENST00000622565 ABCC11Q96J66 1382 aa28.46■■■□□ 2.15
LTBP4-239ENST00000622565 PLEKHH1Q9ULM0 1364 aa28.46■■■□□ 2.15
LTBP4-239ENST00000622565 CFAP70Q5T0N1 1121 aa28.45■■■□□ 2.14
LTBP4-239ENST00000622565 POTEAQ6S8J7 498 aa28.45■■■□□ 2.14
LTBP4-239ENST00000622565 ORAI2Q96SN7 254 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms