RNA–Protein interactions for RNA: ENST00000622449.2

MADCAM1-209, Transcript of mucosal vascular addressin cell adhesion molecule 1, human

TSL 2

Gene MADCAM1, Length 533 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MADCAM1-209	ENST00000622449	ZNF326	Q5BKZ1	582 aa	Known RBP	33.24	■■■□□ 2.91
MADCAM1-209	ENST00000622449	MED14	O60244	1454 aa		33.23	■■■□□ 2.91
MADCAM1-209	ENST00000622449	RPGRIP1L	Q68CZ1	1315 aa		33.23	■■■□□ 2.91
MADCAM1-209	ENST00000622449	NEURL4	Q96JN8	1562 aa		33.21	■■■□□ 2.91
MADCAM1-209	ENST00000622449	RIMS2	Q9UQ26	1411 aa		33.2	■■■□□ 2.91
MADCAM1-209	ENST00000622449	PPP1R15A	O75807	674 aa	Predicted RBP	33.2	■■■□□ 2.91
MADCAM1-209	ENST00000622449	LTBP4	Q8N2S1	1624 aa		33.19	■■■□□ 2.9
MADCAM1-209	ENST00000622449	MYO5B	Q9ULV0	1848 aa		33.18	■■■□□ 2.9
MADCAM1-209	ENST00000622449	ZFYVE9	O95405	1425 aa		33.18	■■■□□ 2.9
MADCAM1-209	ENST00000622449	NPHP4	O75161	1426 aa	Predicted RBP	33.17	■■■□□ 2.9
MADCAM1-209	ENST00000622449	LTK	P29376	864 aa		33.16	■■■□□ 2.9
MADCAM1-209	ENST00000622449	DHX57	Q6P158	1386 aa	Known RBP	33.13	■■■□□ 2.89
MADCAM1-209	ENST00000622449	VGF	O15240	615 aa	Predicted RBP	33.12	■■■□□ 2.89
MADCAM1-209	ENST00000622449	SPATA31E1	Q6ZUB1	1445 aa		33.11	■■■□□ 2.89
MADCAM1-209	ENST00000622449	IQGAP1	P46940	1657 aa		33.1	■■■□□ 2.89
MADCAM1-209	ENST00000622449	PLEKHG1	Q9ULL1	1385 aa		33.09	■■■□□ 2.89
MADCAM1-209	ENST00000622449	STAC3	Q96MF2	364 aa		33.08	■■■□□ 2.89
MADCAM1-209	ENST00000622449	BCAN	Q96GW7	911 aa		33.07	■■■□□ 2.88
MADCAM1-209	ENST00000622449	RGL3	Q3MIN7	710 aa		33.05	■■■□□ 2.88
MADCAM1-209	ENST00000622449	NEXMIF	Q5QGS0	1516 aa		33.04	■■■□□ 2.88
MADCAM1-209	ENST00000622449	IQSEC2	Q5JU85	1478 aa		33.01	■■■□□ 2.88
MADCAM1-209	ENST00000622449	TBX22	Q9Y458	520 aa		32.97	■■■□□ 2.87
MADCAM1-209	ENST00000622449	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.97	■■■□□ 2.87
MADCAM1-209	ENST00000622449	PPL	O60437	1756 aa		32.96	■■■□□ 2.87
MADCAM1-209	ENST00000622449	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.96	■■■□□ 2.87
MADCAM1-209	ENST00000622449	CLSPN	Q9HAW4	1339 aa		32.96	■■■□□ 2.87
MADCAM1-209	ENST00000622449	DIP2A	Q14689	1571 aa		32.96	■■■□□ 2.87
MADCAM1-209	ENST00000622449	SETBP1	Q9Y6X0	1596 aa		32.92	■■■□□ 2.86
MADCAM1-209	ENST00000622449	PIK3R4	Q99570	1358 aa		32.91	■■■□□ 2.86
MADCAM1-209	ENST00000622449	SLC26A8	Q96RN1	970 aa		32.9	■■■□□ 2.86
MADCAM1-209	ENST00000622449	IFT172	Q9UG01	1749 aa		32.89	■■■□□ 2.86
MADCAM1-209	ENST00000622449	MYOM2	P54296	1465 aa		32.89	■■■□□ 2.86
MADCAM1-209	ENST00000622449	DCAF11	Q8TEB1	546 aa		32.86	■■■□□ 2.85
MADCAM1-209	ENST00000622449	ADAMTS13	Q76LX8	1427 aa		32.85	■■■□□ 2.85
MADCAM1-209	ENST00000622449	DISP3	Q9P2K9	1392 aa		32.85	■■■□□ 2.85
MADCAM1-209	ENST00000622449	CPS1	P31327	1500 aa		32.84	■■■□□ 2.85
MADCAM1-209	ENST00000622449	NEUROD1	Q13562	356 aa		32.84	■■■□□ 2.85
MADCAM1-209	ENST00000622449	KCNA6	P17658	529 aa		32.83	■■■□□ 2.85
MADCAM1-209	ENST00000622449	SIN3A	Q96ST3	1273 aa		32.83	■■■□□ 2.85
MADCAM1-209	ENST00000622449	ADGRF5	Q8IZF2	1346 aa		32.81	■■■□□ 2.84
MADCAM1-209	ENST00000622449	CCER1	Q8TC90	406 aa	Predicted RBP	32.79	■■■□□ 2.84
MADCAM1-209	ENST00000622449	NRXN1	Q9ULB1	1477 aa		32.79	■■■□□ 2.84
MADCAM1-209	ENST00000622449	PIK3C2G	O75747	1445 aa		32.78	■■■□□ 2.84
MADCAM1-209	ENST00000622449	NRXN3	Q9Y4C0	1643 aa		32.78	■■■□□ 2.84
MADCAM1-209	ENST00000622449	KDM2A	Q9Y2K7	1162 aa		32.77	■■■□□ 2.84
MADCAM1-209	ENST00000622449	ILDR2	Q71H61	639 aa		32.76	■■■□□ 2.83
MADCAM1-209	ENST00000622449	UBAP1L	F5GYI3	381 aa		32.75	■■■□□ 2.83
MADCAM1-209	ENST00000622449	SENP3	Q9H4L4	574 aa	Predicted RBP	32.75	■■■□□ 2.83
MADCAM1-209	ENST00000622449	ALK	Q9UM73	1620 aa		32.75	■■■□□ 2.83
MADCAM1-209	ENST00000622449	TONSL	Q96HA7	1378 aa		32.74	■■■□□ 2.83
MADCAM1-209	ENST00000622449	NKTR	P30414	1462 aa	Known RBP	32.73	■■■□□ 2.83
MADCAM1-209	ENST00000622449	LAMC1	P11047	1609 aa		32.73	■■■□□ 2.83
MADCAM1-209	ENST00000622449	C14orf93	Q9H972	538 aa	Known RBP	32.72	■■■□□ 2.83
MADCAM1-209	ENST00000622449	CHD2	O14647	1828 aa	Known RBP	32.72	■■■□□ 2.83
MADCAM1-209	ENST00000622449	NWD1	Q149M9	1564 aa		32.71	■■■□□ 2.83
MADCAM1-209	ENST00000622449	L3MBTL2	Q969R5	705 aa		32.71	■■■□□ 2.83
MADCAM1-209	ENST00000622449	TIMELESS	Q9UNS1	1208 aa		32.71	■■■□□ 2.83
MADCAM1-209	ENST00000622449	AMOTL2	Q9Y2J4	779 aa		32.68	■■■□□ 2.82
MADCAM1-209	ENST00000622449	MET	P08581	1390 aa		32.67	■■■□□ 2.82
MADCAM1-209	ENST00000622449	PROSER2	Q86WR7	435 aa	Predicted RBP	32.65	■■■□□ 2.82
MADCAM1-209	ENST00000622449	SETD1A	O15047	1707 aa	Known RBP	32.63	■■■□□ 2.81
MADCAM1-209	ENST00000622449	NCOA3	Q9Y6Q9	1424 aa		32.63	■■■□□ 2.81
MADCAM1-209	ENST00000622449	CFAP70	Q5T0N1	1121 aa		32.61	■■■□□ 2.81
MADCAM1-209	ENST00000622449	LRRC7	Q96NW7	1537 aa		32.61	■■■□□ 2.81
MADCAM1-209	ENST00000622449	PRAG1	Q86YV5	1406 aa		32.6	■■■□□ 2.81
MADCAM1-209	ENST00000622449	STRCP1	A6NGW2	1772 aa		32.6	■■■□□ 2.81
MADCAM1-209	ENST00000622449	PTPRU	Q92729	1446 aa		32.59	■■■□□ 2.81
MADCAM1-209	ENST00000622449	LRPPRC	P42704	1394 aa	Known RBP	32.58	■■■□□ 2.81
MADCAM1-209	ENST00000622449	XRN1	Q8IZH2	1706 aa	Known RBP	32.57	■■■□□ 2.81
MADCAM1-209	ENST00000622449	KIAA1210	Q9ULL0	1709 aa		32.57	■■■□□ 2.81
MADCAM1-209	ENST00000622449	PTCH1	Q13635	1447 aa		32.56	■■■□□ 2.8
MADCAM1-209	ENST00000622449	ABCC11	Q96J66	1382 aa		32.56	■■■□□ 2.8
MADCAM1-209	ENST00000622449	TMEM94	Q12767	1356 aa		32.54	■■■□□ 2.8
MADCAM1-209	ENST00000622449	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.53	■■■□□ 2.8
MADCAM1-209	ENST00000622449	SIRT1	Q96EB6	747 aa		32.53	■■■□□ 2.8
MADCAM1-209	ENST00000622449	TMEM132E	Q6IEE7	984 aa		32.52	■■■□□ 2.8
MADCAM1-209	ENST00000622449	TECPR2	O15040	1411 aa		32.51	■■■□□ 2.8
MADCAM1-209	ENST00000622449	SOCS7	O14512	581 aa		32.51	■■■□□ 2.79
MADCAM1-209	ENST00000622449	SCAF1	Q9H7N4	1312 aa	Known RBP	32.5	■■■□□ 2.79
MADCAM1-209	ENST00000622449	MSH6	P52701	1360 aa		32.48	■■■□□ 2.79
MADCAM1-209	ENST00000622449	PIP4K2B	P78356	416 aa		32.48	■■■□□ 2.79
MADCAM1-209	ENST00000622449	C14orf37	Q86TY3	774 aa		32.48	■■■□□ 2.79
MADCAM1-209	ENST00000622449	STK26	Q9P289	416 aa		32.48	■■■□□ 2.79
MADCAM1-209	ENST00000622449	KNDC1	Q76NI1	1749 aa		32.47	■■■□□ 2.79
MADCAM1-209	ENST00000622449	ASXL1	Q8IXJ9	1541 aa		32.46	■■■□□ 2.79
MADCAM1-209	ENST00000622449	ADGRB1	O14514	1584 aa		32.46	■■■□□ 2.79
MADCAM1-209	ENST00000622449	TOM1	O60784	492 aa		32.46	■■■□□ 2.79
MADCAM1-209	ENST00000622449	FAM135B	Q49AJ0	1406 aa		32.45	■■■□□ 2.79
MADCAM1-209	ENST00000622449	C19orf44	Q9H6X5	657 aa		32.44	■■■□□ 2.78
MADCAM1-209	ENST00000622449	HSPA1L	P34931	641 aa		32.43	■■■□□ 2.78
MADCAM1-209	ENST00000622449	ROBO2	Q9HCK4	1378 aa		32.43	■■■□□ 2.78
MADCAM1-209	ENST00000622449	DLC1	Q96QB1	1528 aa		32.42	■■■□□ 2.78
MADCAM1-209	ENST00000622449	CADPS2	Q86UW7	1296 aa		32.39	■■■□□ 2.78
MADCAM1-209	ENST00000622449	ROCK2	O75116	1388 aa	Known RBP	32.39	■■■□□ 2.78
MADCAM1-209	ENST00000622449	XIRP1	Q702N8	1843 aa	Known RBP	32.39	■■■□□ 2.78
MADCAM1-209	ENST00000622449	TRPM1	Q7Z4N2	1603 aa		32.38	■■■□□ 2.77
MADCAM1-209	ENST00000622449	DCC	P43146	1447 aa		32.38	■■■□□ 2.77
MADCAM1-209	ENST00000622449	ATF3	P18847	181 aa		32.37	■■■□□ 2.77
MADCAM1-209	ENST00000622449	POGK	Q9P215	609 aa		32.37	■■■□□ 2.77
MADCAM1-209	ENST00000622449	TRAK1	Q9UPV9	953 aa		32.36	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms