RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 RSPH4AQ5TD94 716 aa14.84□□□□□ -0.03
SLC6A6-210ENST00000622186 EIF3AQ14152 1382 aaKnown RBP14.84□□□□□ -0.03
SLC6A6-210ENST00000622186 CLUAP1Q96AJ1 413 aa14.84□□□□□ -0.03
SLC6A6-210ENST00000622186 HOOK1Q9UJC3 728 aaKnown RBP14.84□□□□□ -0.03
SLC6A6-210ENST00000622186 SIN3AQ96ST3 1273 aa14.84□□□□□ -0.03
SLC6A6-210ENST00000622186 CDR1P51861 262 aa14.84□□□□□ -0.03
SLC6A6-210ENST00000622186 OFD1O75665 1012 aa14.83□□□□□ -0.03
SLC6A6-210ENST00000622186 FOXD4L6Q3SYB3 417 aaPredicted RBP14.83□□□□□ -0.03
SLC6A6-210ENST00000622186 FOXD4L3Q6VB84 417 aaPredicted RBP14.83□□□□□ -0.03
SLC6A6-210ENST00000622186 NECTIN2Q92692 538 aa14.83□□□□□ -0.04
SLC6A6-210ENST00000622186 PODXL2Q9NZ53 605 aa14.83□□□□□ -0.04
SLC6A6-210ENST00000622186 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
SLC6A6-210ENST00000622186 RUFY1Q96T51 708 aa14.81□□□□□ -0.04
SLC6A6-210ENST00000622186 STRN4Q9NRL3 753 aa14.81□□□□□ -0.04
SLC6A6-210ENST00000622186 WDHD1O75717 1129 aaPredicted RBP14.81□□□□□ -0.04
SLC6A6-210ENST00000622186 COG3Q96JB2 828 aa14.81□□□□□ -0.04
SLC6A6-210ENST00000622186 ROCK2O75116 1388 aaKnown RBP14.81□□□□□ -0.04
SLC6A6-210ENST00000622186 EFCAB2Q5VUJ9 269 aa14.8□□□□□ -0.04
SLC6A6-210ENST00000622186 IFIT2P09913 472 aaKnown RBP14.8□□□□□ -0.04
SLC6A6-210ENST00000622186 TTC16Q8NEE8 873 aa14.8□□□□□ -0.04
SLC6A6-210ENST00000622186 ZNF592Q92610 1267 aa14.8□□□□□ -0.04
SLC6A6-210ENST00000622186 CCDC173Q0VFZ6 552 aa14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 ANO2Q9NQ90 1003 aa14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 NEBLO76041 1014 aa14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 PKD2Q13563 968 aa14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 CCDC146Q8IYE0 955 aa14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 ELL2O00472 640 aaPredicted RBP14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 GOLGA6L3A6NEY3 463 aa14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 DDX58O95786 925 aaKnown RBP14.79□□□□□ -0.04
SLC6A6-210ENST00000622186 SAFBQ15424 915 aaKnown RBP eCLIP14.78□□□□□ -0.04
SLC6A6-210ENST00000622186 RFX1P22670 979 aa14.78□□□□□ -0.04
SLC6A6-210ENST00000622186 WDR78Q5VTH9 848 aa14.78□□□□□ -0.04
SLC6A6-210ENST00000622186 FOSBP53539 338 aa14.78□□□□□ -0.04
SLC6A6-210ENST00000622186 BRMS1Q9HCU9 246 aa14.78□□□□□ -0.04
SLC6A6-210ENST00000622186 ATP6V1DQ9Y5K8 247 aa14.78□□□□□ -0.04
SLC6A6-210ENST00000622186 HOMER1Q86YM7 354 aa14.77□□□□□ -0.04
SLC6A6-210ENST00000622186 MATR3P43243 847 aaKnown RBP eCLIP14.77□□□□□ -0.04
SLC6A6-210ENST00000622186 RUFY2Q8WXA3 655 aa14.77□□□□□ -0.04
SLC6A6-210ENST00000622186 SYCP1Q15431 976 aa14.77□□□□□ -0.05
SLC6A6-210ENST00000622186 CRBNQ96SW2 442 aa14.76□□□□□ -0.05
SLC6A6-210ENST00000622186 ZKSCAN1P17029 563 aaPredicted RBP14.75□□□□□ -0.05
SLC6A6-210ENST00000622186 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.05
SLC6A6-210ENST00000622186 WASHC4Q2M389 1173 aa14.75□□□□□ -0.05
SLC6A6-210ENST00000622186 CBX1P83916 185 aa14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 ZRSR2Q15696 482 aaKnown RBP14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 ANKRD62A6NC57 917 aa14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 RAPGEF4Q8WZA2 1011 aa14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 NEUROD6Q96NK8 337 aa14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 PDCL3Q9H2J4 239 aa14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
SLC6A6-210ENST00000622186 CDK5RAP3Q96JB5 506 aa14.73□□□□□ -0.05
SLC6A6-210ENST00000622186 NEFHP12036 1026 aa14.73□□□□□ -0.05
SLC6A6-210ENST00000622186 TRAK1Q9UPV9 953 aa14.73□□□□□ -0.05
SLC6A6-210ENST00000622186 RCAN3Q9UKA8 241 aa14.73□□□□□ -0.05
SLC6A6-210ENST00000622186 SKIDA1Q1XH10 827 aa14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 BICD2Q8TD16 824 aa14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 PSMD1Q99460 953 aa14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 ZNF219Q9P2Y4 722 aaPredicted RBP14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 CENPJQ9HC77 1338 aaPredicted RBP14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 NUTM2GQ5VZR2 741 aa14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 SCLT1Q96NL6 688 aa14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 RALYLQ86SE5 291 aaKnown RBP14.72□□□□□ -0.05
SLC6A6-210ENST00000622186 NLRP2Q9NX02 1062 aa14.71□□□□□ -0.05
SLC6A6-210ENST00000622186 XBP1P17861 261 aa14.71□□□□□ -0.05
SLC6A6-210ENST00000622186 ANKRD45Q5TZF3 282 aa14.71□□□□□ -0.05
SLC6A6-210ENST00000622186 STK11IPQ8N1F8 1099 aa14.71□□□□□ -0.06
SLC6A6-210ENST00000622186 ZMYND15Q9H091 742 aa14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 MYO6Q9UM54 1294 aa14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 HSP90AB4PQ58FF6 505 aa14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 CARMIL2Q6F5E8 1435 aa14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 ZSCAN29Q8IWY8 852 aaPredicted RBP14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 RRP7AQ9Y3A4 280 aaKnown RBP14.7□□□□□ -0.06
SLC6A6-210ENST00000622186 VTI1AQ96AJ9 217 aa14.69□□□□□ -0.06
SLC6A6-210ENST00000622186 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
SLC6A6-210ENST00000622186 RIC3Q7Z5B4 369 aa14.69□□□□□ -0.06
SLC6A6-210ENST00000622186 AIMP1Q12904 312 aaKnown RBP14.69□□□□□ -0.06
SLC6A6-210ENST00000622186 MAP7D2Q96T17 732 aa14.69□□□□□ -0.06
SLC6A6-210ENST00000622186 CAGE1Q8TC20 777 aa14.69□□□□□ -0.06
SLC6A6-210ENST00000622186 SLC3A2P08195 630 aaKnown RBP14.68□□□□□ -0.06
SLC6A6-210ENST00000622186 DRC1Q96MC2 740 aa14.67□□□□□ -0.06
SLC6A6-210ENST00000622186 DCTN1Q14203 1278 aa14.67□□□□□ -0.06
SLC6A6-210ENST00000622186 ANKRD18AQ8IVF6 992 aa14.67□□□□□ -0.06
SLC6A6-210ENST00000622186 CCDC191Q8NCU4 936 aa14.67□□□□□ -0.06
SLC6A6-210ENST00000622186 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
SLC6A6-210ENST00000622186 RALBP1Q15311 655 aa14.66□□□□□ -0.06
SLC6A6-210ENST00000622186 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
SLC6A6-210ENST00000622186 NUP155O75694 1391 aa14.66□□□□□ -0.06
SLC6A6-210ENST00000622186 KIF6Q6ZMV9 814 aa14.66□□□□□ -0.06
SLC6A6-210ENST00000622186 TRIM21P19474 475 aaKnown RBP14.65□□□□□ -0.06
SLC6A6-210ENST00000622186 TBC1D2BQ9UPU7 963 aa14.65□□□□□ -0.06
SLC6A6-210ENST00000622186 DESP17661 470 aa14.65□□□□□ -0.06
SLC6A6-210ENST00000622186 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
SLC6A6-210ENST00000622186 SEPT7Q16181 437 aaKnown RBP14.65□□□□□ -0.06
SLC6A6-210ENST00000622186 BICDL1Q6ZP65 573 aa14.65□□□□□ -0.06
SLC6A6-210ENST00000622186 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
SLC6A6-210ENST00000622186 TEX35Q5T0J7 233 aa14.64□□□□□ -0.07
SLC6A6-210ENST00000622186 OLFM4Q6UX06 510 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms