RNA–Protein interactions for RNA: ENST00000621286.1

MADCAM1-208, Transcript of mucosal vascular addressin cell adhesion molecule 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MADCAM1, Length 1,203 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MADCAM1-208	ENST00000621286	RIMS2	Q9UQ26	1411 aa		32.59	■■■□□ 2.81
MADCAM1-208	ENST00000621286	IQSEC2	Q5JU85	1478 aa		32.57	■■■□□ 2.8
MADCAM1-208	ENST00000621286	ZNF326	Q5BKZ1	582 aa	Known RBP	32.57	■■■□□ 2.8
MADCAM1-208	ENST00000621286	CPS1	P31327	1500 aa		32.56	■■■□□ 2.8
MADCAM1-208	ENST00000621286	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.56	■■■□□ 2.8
MADCAM1-208	ENST00000621286	SLC26A8	Q96RN1	970 aa		32.56	■■■□□ 2.8
MADCAM1-208	ENST00000621286	MPHOSPH9	Q99550	1183 aa		32.55	■■■□□ 2.8
MADCAM1-208	ENST00000621286	ZFYVE9	O95405	1425 aa		32.52	■■■□□ 2.8
MADCAM1-208	ENST00000621286	FOXD1	Q16676	465 aa		32.51	■■■□□ 2.79
MADCAM1-208	ENST00000621286	UBAP1L	F5GYI3	381 aa		32.5	■■■□□ 2.79
MADCAM1-208	ENST00000621286	TRPM2	O94759	1503 aa		32.49	■■■□□ 2.79
MADCAM1-208	ENST00000621286	PLEKHG1	Q9ULL1	1385 aa		32.48	■■■□□ 2.79
MADCAM1-208	ENST00000621286	RAB3GAP2	Q9H2M9	1393 aa		32.47	■■■□□ 2.79
MADCAM1-208	ENST00000621286	CLTCL1	P53675	1640 aa		32.45	■■■□□ 2.79
MADCAM1-208	ENST00000621286	KIF1B	O60333	1816 aa		32.43	■■■□□ 2.78
MADCAM1-208	ENST00000621286	KCNA6	P17658	529 aa		32.43	■■■□□ 2.78
MADCAM1-208	ENST00000621286	STRCP1	A6NGW2	1772 aa		32.42	■■■□□ 2.78
MADCAM1-208	ENST00000621286	TOM1	O60784	492 aa		32.4	■■■□□ 2.78
MADCAM1-208	ENST00000621286	TBX22	Q9Y458	520 aa		32.4	■■■□□ 2.78
MADCAM1-208	ENST00000621286	LRRC7	Q96NW7	1537 aa		32.37	■■■□□ 2.77
MADCAM1-208	ENST00000621286	PROSER2	Q86WR7	435 aa	Predicted RBP	32.36	■■■□□ 2.77
MADCAM1-208	ENST00000621286	SCAF1	Q9H7N4	1312 aa	Known RBP	32.35	■■■□□ 2.77
MADCAM1-208	ENST00000621286	CCDC144A	A2RUR9	1427 aa		32.34	■■■□□ 2.77
MADCAM1-208	ENST00000621286	HRC	P23327	699 aa		32.33	■■■□□ 2.77
MADCAM1-208	ENST00000621286	PIP4K2B	P78356	416 aa		32.32	■■■□□ 2.76
MADCAM1-208	ENST00000621286	VGF	O15240	615 aa	Predicted RBP	32.3	■■■□□ 2.76
MADCAM1-208	ENST00000621286	RPGRIP1L	Q68CZ1	1315 aa		32.29	■■■□□ 2.76
MADCAM1-208	ENST00000621286	ADAMTS13	Q76LX8	1427 aa		32.28	■■■□□ 2.76
MADCAM1-208	ENST00000621286	RGL3	Q3MIN7	710 aa		32.28	■■■□□ 2.76
MADCAM1-208	ENST00000621286	RBM33	Q96EV2	1170 aa	Known RBP	32.26	■■■□□ 2.75
MADCAM1-208	ENST00000621286	NEXMIF	Q5QGS0	1516 aa		32.25	■■■□□ 2.75
MADCAM1-208	ENST00000621286	TMEM94	Q12767	1356 aa		32.24	■■■□□ 2.75
MADCAM1-208	ENST00000621286	DIP2A	Q14689	1571 aa		32.24	■■■□□ 2.75
MADCAM1-208	ENST00000621286	CHD2	O14647	1828 aa	Known RBP	32.23	■■■□□ 2.75
MADCAM1-208	ENST00000621286	PIK3R4	Q99570	1358 aa		32.21	■■■□□ 2.75
MADCAM1-208	ENST00000621286	AMOTL2	Q9Y2J4	779 aa		32.21	■■■□□ 2.75
MADCAM1-208	ENST00000621286	NKTR	P30414	1462 aa	Known RBP	32.2	■■■□□ 2.75
MADCAM1-208	ENST00000621286	NWD1	Q149M9	1564 aa		32.19	■■■□□ 2.74
MADCAM1-208	ENST00000621286	SETBP1	Q9Y6X0	1596 aa		32.17	■■■□□ 2.74
MADCAM1-208	ENST00000621286	C14orf37	Q86TY3	774 aa		32.17	■■■□□ 2.74
MADCAM1-208	ENST00000621286	ALK	Q9UM73	1620 aa		32.17	■■■□□ 2.74
MADCAM1-208	ENST00000621286	XIRP1	Q702N8	1843 aa	Known RBP	32.16	■■■□□ 2.74
MADCAM1-208	ENST00000621286	NRXN3	Q9Y4C0	1643 aa		32.13	■■■□□ 2.73
MADCAM1-208	ENST00000621286	SPATA31E1	Q6ZUB1	1445 aa		32.12	■■■□□ 2.73
MADCAM1-208	ENST00000621286	MSH6	P52701	1360 aa		32.11	■■■□□ 2.73
MADCAM1-208	ENST00000621286	PPL	O60437	1756 aa		32.11	■■■□□ 2.73
MADCAM1-208	ENST00000621286	MET	P08581	1390 aa		32.1	■■■□□ 2.73
MADCAM1-208	ENST00000621286	PTPRU	Q92729	1446 aa		32.09	■■■□□ 2.73
MADCAM1-208	ENST00000621286	ANKRD30B	Q9BXX2	1392 aa		32.08	■■■□□ 2.73
MADCAM1-208	ENST00000621286	ADGRF5	Q8IZF2	1346 aa		32.06	■■■□□ 2.72
MADCAM1-208	ENST00000621286	HSPA1L	P34931	641 aa		32.06	■■■□□ 2.72
MADCAM1-208	ENST00000621286	NCOA3	Q9Y6Q9	1424 aa		32.04	■■■□□ 2.72
MADCAM1-208	ENST00000621286	C19orf44	Q9H6X5	657 aa		32.01	■■■□□ 2.71
MADCAM1-208	ENST00000621286	ATF3	P18847	181 aa		32	■■■□□ 2.71
MADCAM1-208	ENST00000621286	SLAIN2	Q9P270	581 aa		31.98	■■■□□ 2.71
MADCAM1-208	ENST00000621286	TRIM26	Q12899	539 aa	Predicted RBP	31.97	■■■□□ 2.71
MADCAM1-208	ENST00000621286	XRN1	Q8IZH2	1706 aa	Known RBP	31.96	■■■□□ 2.71
MADCAM1-208	ENST00000621286	IFT172	Q9UG01	1749 aa		31.95	■■■□□ 2.71
MADCAM1-208	ENST00000621286	CADPS2	Q86UW7	1296 aa		31.95	■■■□□ 2.71
MADCAM1-208	ENST00000621286	KDM2A	Q9Y2K7	1162 aa		31.93	■■■□□ 2.7
MADCAM1-208	ENST00000621286	FAM135B	Q49AJ0	1406 aa		31.92	■■■□□ 2.7
MADCAM1-208	ENST00000621286	STK26	Q9P289	416 aa		31.91	■■■□□ 2.7
MADCAM1-208	ENST00000621286	SETD1A	O15047	1707 aa	Known RBP	31.9	■■■□□ 2.7
MADCAM1-208	ENST00000621286	DCAF11	Q8TEB1	546 aa		31.9	■■■□□ 2.7
MADCAM1-208	ENST00000621286	TMEM132E	Q6IEE7	984 aa		31.89	■■■□□ 2.7
MADCAM1-208	ENST00000621286	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.89	■■■□□ 2.69
MADCAM1-208	ENST00000621286	PIK3C2G	O75747	1445 aa		31.87	■■■□□ 2.69
MADCAM1-208	ENST00000621286	C14orf93	Q9H972	538 aa	Known RBP	31.86	■■■□□ 2.69
MADCAM1-208	ENST00000621286	CFAP70	Q5T0N1	1121 aa		31.85	■■■□□ 2.69
MADCAM1-208	ENST00000621286	ROBO2	Q9HCK4	1378 aa		31.84	■■■□□ 2.69
MADCAM1-208	ENST00000621286	STAC3	Q96MF2	364 aa		31.84	■■■□□ 2.69
MADCAM1-208	ENST00000621286	MYOM2	P54296	1465 aa		31.84	■■■□□ 2.69
MADCAM1-208	ENST00000621286	ROBO1	Q9Y6N7	1651 aa		31.83	■■■□□ 2.69
MADCAM1-208	ENST00000621286	PTCH1	Q13635	1447 aa		31.82	■■■□□ 2.68
MADCAM1-208	ENST00000621286	LRPPRC	P42704	1394 aa	Known RBP	31.8	■■■□□ 2.68
MADCAM1-208	ENST00000621286	ADGRL3	Q9HAR2	1447 aa		31.79	■■■□□ 2.68
MADCAM1-208	ENST00000621286	DISP3	Q9P2K9	1392 aa		31.79	■■■□□ 2.68
MADCAM1-208	ENST00000621286	NRXN1	Q9ULB1	1477 aa		31.78	■■■□□ 2.68
MADCAM1-208	ENST00000621286	DCC	P43146	1447 aa		31.78	■■■□□ 2.68
MADCAM1-208	ENST00000621286	DHX57	Q6P158	1386 aa	Known RBP	31.78	■■■□□ 2.68
MADCAM1-208	ENST00000621286	ABCC11	Q96J66	1382 aa		31.76	■■■□□ 2.67
MADCAM1-208	ENST00000621286	WAPL	Q7Z5K2	1190 aa		31.75	■■■□□ 2.67
MADCAM1-208	ENST00000621286	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.75	■■■□□ 2.67
MADCAM1-208	ENST00000621286	PRAG1	Q86YV5	1406 aa		31.74	■■■□□ 2.67
MADCAM1-208	ENST00000621286	LAMC1	P11047	1609 aa		31.72	■■■□□ 2.67
MADCAM1-208	ENST00000621286	NALCN	Q8IZF0	1738 aa		31.72	■■■□□ 2.67
MADCAM1-208	ENST00000621286	NEUROD1	Q13562	356 aa		31.7	■■■□□ 2.67
MADCAM1-208	ENST00000621286	ASXL1	Q8IXJ9	1541 aa		31.7	■■■□□ 2.66
MADCAM1-208	ENST00000621286	BRINP3	Q76B58	766 aa		31.69	■■■□□ 2.66
MADCAM1-208	ENST00000621286	TECPR2	O15040	1411 aa		31.68	■■■□□ 2.66
MADCAM1-208	ENST00000621286	MST1R	Q04912	1400 aa		31.68	■■■□□ 2.66
MADCAM1-208	ENST00000621286	SIRT1	Q96EB6	747 aa		31.68	■■■□□ 2.66
MADCAM1-208	ENST00000621286	SIN3A	Q96ST3	1273 aa		31.68	■■■□□ 2.66
MADCAM1-208	ENST00000621286	PHLPP1	O60346	1717 aa		31.67	■■■□□ 2.66
MADCAM1-208	ENST00000621286	POGK	Q9P215	609 aa		31.65	■■■□□ 2.66
MADCAM1-208	ENST00000621286	KNDC1	Q76NI1	1749 aa		31.63	■■■□□ 2.65
MADCAM1-208	ENST00000621286	TRAK1	Q9UPV9	953 aa		31.63	■■■□□ 2.65
MADCAM1-208	ENST00000621286	PLEKHH1	Q9ULM0	1364 aa		31.63	■■■□□ 2.65
MADCAM1-208	ENST00000621286	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.61	■■■□□ 2.65
MADCAM1-208	ENST00000621286	PRAM1	Q96QH2	718 aa		31.61	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms