RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 NUTM2FA1L443 756 aa16.4■□□□□ 0.22
MALAT1-217ENST00000620902 KIAA1468Q9P260 1216 aa16.4■□□□□ 0.22
MALAT1-217ENST00000620902 RBM27Q9P2N5 1060 aaKnown RBP16.4■□□□□ 0.22
MALAT1-217ENST00000620902 PACS2Q86VP3 889 aa16.39■□□□□ 0.21
MALAT1-217ENST00000620902 RNF166Q96A37 237 aaPredicted RBP16.39■□□□□ 0.21
MALAT1-217ENST00000620902 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
MALAT1-217ENST00000620902 PTGDRQ13258 359 aa16.36■□□□□ 0.21
MALAT1-217ENST00000620902 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
MALAT1-217ENST00000620902 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
MALAT1-217ENST00000620902 TSKSQ9UJT2 592 aa16.35■□□□□ 0.21
MALAT1-217ENST00000620902 LAPTM4BQ86VI4 370 aa16.34■□□□□ 0.21
MALAT1-217ENST00000620902 SPATA31D1Q6ZQQ2 1576 aa16.34■□□□□ 0.21
MALAT1-217ENST00000620902 FCHSD2O94868 740 aa16.33■□□□□ 0.2
MALAT1-217ENST00000620902 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
MALAT1-217ENST00000620902 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
MALAT1-217ENST00000620902 GOLGA8CPA6NN73 597 aa16.32■□□□□ 0.2
MALAT1-217ENST00000620902 SNAPC4Q5SXM2 1469 aa16.3■□□□□ 0.2
MALAT1-217ENST00000620902 TTC13Q8NBP0 860 aa16.3■□□□□ 0.2
MALAT1-217ENST00000620902 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
MALAT1-217ENST00000620902 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
MALAT1-217ENST00000620902 PADI6Q6TGC4 694 aa16.28■□□□□ 0.2
MALAT1-217ENST00000620902 FAM198AQ9UFP1 575 aa16.28■□□□□ 0.2
MALAT1-217ENST00000620902 NBPF26B4DH59 902 aa16.27■□□□□ 0.2
MALAT1-217ENST00000620902 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
MALAT1-217ENST00000620902 HIC1Q14526 733 aa16.25■□□□□ 0.19
MALAT1-217ENST00000620902 TATDN2Q93075 761 aa16.25■□□□□ 0.19
MALAT1-217ENST00000620902 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
MALAT1-217ENST00000620902 SEPT9Q9UHD8 586 aaPredicted RBP16.24■□□□□ 0.19
MALAT1-217ENST00000620902 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
MALAT1-217ENST00000620902 GPIHBP1Q8IV16 184 aa16.23■□□□□ 0.19
MALAT1-217ENST00000620902 WNT2BQ93097 391 aa16.23■□□□□ 0.19
MALAT1-217ENST00000620902 KCTD12Q96CX2 325 aaKnown RBP16.23■□□□□ 0.19
MALAT1-217ENST00000620902 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.19
MALAT1-217ENST00000620902 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
MALAT1-217ENST00000620902 ZFRQ96KR1 1074 aaKnown RBP16.21■□□□□ 0.19
MALAT1-217ENST00000620902 NUDT18Q6ZVK8 323 aa16.2■□□□□ 0.18
MALAT1-217ENST00000620902 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
MALAT1-217ENST00000620902 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
MALAT1-217ENST00000620902 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
MALAT1-217ENST00000620902 ANKK1Q8NFD2 765 aa16.19■□□□□ 0.18
MALAT1-217ENST00000620902 GNPATO15228 680 aa16.18■□□□□ 0.18
MALAT1-217ENST00000620902 GPR37O15354 613 aa16.18■□□□□ 0.18
MALAT1-217ENST00000620902 HCSTQ9UBK5 93 aa16.18■□□□□ 0.18
MALAT1-217ENST00000620902 SMAPO00193 183 aa16.17■□□□□ 0.18
MALAT1-217ENST00000620902 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
MALAT1-217ENST00000620902 C3orf80F5H4A9 247 aa16.15■□□□□ 0.18
MALAT1-217ENST00000620902 THSD4Q6ZMP0 1018 aa16.15■□□□□ 0.18
MALAT1-217ENST00000620902 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
MALAT1-217ENST00000620902 WIZO95785 1651 aa16.14■□□□□ 0.17
MALAT1-217ENST00000620902 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
MALAT1-217ENST00000620902 EYA1Q99502 592 aa16.13■□□□□ 0.17
MALAT1-217ENST00000620902 ADGRG1Q9Y653 693 aa16.13■□□□□ 0.17
MALAT1-217ENST00000620902 RBM46Q8TBY0 533 aaKnown RBP16.12■□□□□ 0.17
MALAT1-217ENST00000620902 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
MALAT1-217ENST00000620902 SOWAHBA6NEL2 793 aa16.11■□□□□ 0.17
MALAT1-217ENST00000620902 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
MALAT1-217ENST00000620902 OATP04181 439 aa16.1■□□□□ 0.17
MALAT1-217ENST00000620902 BCANQ96GW7 911 aa16.1■□□□□ 0.17
MALAT1-217ENST00000620902 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
MALAT1-217ENST00000620902 LRCH3Q96II8 777 aa16.09■□□□□ 0.17
MALAT1-217ENST00000620902 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
MALAT1-217ENST00000620902 FECHP22830 423 aa16.07■□□□□ 0.16
MALAT1-217ENST00000620902 PTPN5P54829 565 aa16.07■□□□□ 0.16
MALAT1-217ENST00000620902 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
MALAT1-217ENST00000620902 WDR97A6NE52 1622 aa16.06■□□□□ 0.16
MALAT1-217ENST00000620902 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
MALAT1-217ENST00000620902 RAD54L2Q9Y4B4 1467 aa16.05■□□□□ 0.16
MALAT1-217ENST00000620902 BCAMP50895 628 aa16.05■□□□□ 0.16
MALAT1-217ENST00000620902 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
MALAT1-217ENST00000620902 DNAJB2P25686 324 aa16.03■□□□□ 0.16
MALAT1-217ENST00000620902 FAM161AQ3B820 660 aa16.02■□□□□ 0.16
MALAT1-217ENST00000620902 TSR3Q9UJK0 312 aaKnown RBP16.02■□□□□ 0.16
MALAT1-217ENST00000620902 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
MALAT1-217ENST00000620902 NYAP1Q6ZVC0 841 aa16.01■□□□□ 0.15
MALAT1-217ENST00000620902 PXYLP1Q8TE99 480 aa16.01■□□□□ 0.15
MALAT1-217ENST00000620902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.99■□□□□ 0.15
MALAT1-217ENST00000620902 RCCD1A6NED2 376 aa15.99■□□□□ 0.15
MALAT1-217ENST00000620902 SLC4A3P48751 1232 aa15.99■□□□□ 0.15
MALAT1-217ENST00000620902 MAP2K5Q13163 448 aa15.99■□□□□ 0.15
MALAT1-217ENST00000620902 METTL3Q86U44 580 aaKnown RBP15.99■□□□□ 0.15
MALAT1-217ENST00000620902 SWT1Q5T5J6 900 aaKnown RBP15.98■□□□□ 0.15
MALAT1-217ENST00000620902 HPS5Q9UPZ3 1129 aa15.98■□□□□ 0.15
MALAT1-217ENST00000620902 NECTIN2Q92692 538 aa15.97■□□□□ 0.15
MALAT1-217ENST00000620902 TMEM134Q9H6X4 195 aa15.97■□□□□ 0.15
MALAT1-217ENST00000620902 MINK1Q8N4C8 1332 aaPredicted RBP15.96■□□□□ 0.15
MALAT1-217ENST00000620902 SOGA1O94964 1423 aa15.96■□□□□ 0.15
MALAT1-217ENST00000620902 PPP4CP60510 307 aa15.96■□□□□ 0.15
MALAT1-217ENST00000620902 SLF2Q8IX21 1173 aa15.96■□□□□ 0.15
MALAT1-217ENST00000620902 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
MALAT1-217ENST00000620902 WBP1LQ9NX94 342 aa15.95■□□□□ 0.14
MALAT1-217ENST00000620902 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
MALAT1-217ENST00000620902 IRF6O14896 467 aa15.94■□□□□ 0.14
MALAT1-217ENST00000620902 ZMYND10O75800 440 aa15.92■□□□□ 0.14
MALAT1-217ENST00000620902 RNF40O75150 1001 aa15.9■□□□□ 0.14
MALAT1-217ENST00000620902 BARGINQ6ZT62 677 aa15.9■□□□□ 0.14
MALAT1-217ENST00000620902 PPRC1Q5VV67 1664 aaKnown RBP15.89■□□□□ 0.13
MALAT1-217ENST00000620902 COL17A1Q9UMD9 1497 aaPredicted RBP15.88■□□□□ 0.13
MALAT1-217ENST00000620902 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
MALAT1-217ENST00000620902 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
MALAT1-217ENST00000620902 KRI1Q8N9T8 703 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms