RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RIMS2Q9UQ26 1411 aa26.02■■□□□ 1.76
HMGN3-203ENST00000620514 ALKQ9UM73 1620 aa26.02■■□□□ 1.76
HMGN3-203ENST00000620514 BCANQ96GW7 911 aa25.98■■□□□ 1.75
HMGN3-203ENST00000620514 PPP1R15AO75807 674 aaPredicted RBP25.96■■□□□ 1.75
HMGN3-203ENST00000620514 PLEKHG1Q9ULL1 1385 aa25.95■■□□□ 1.75
HMGN3-203ENST00000620514 NUTM2DQ5VT03 806 aaPredicted RBP25.95■■□□□ 1.74
HMGN3-203ENST00000620514 HFM1A2PYH4 1435 aa25.95■■□□□ 1.74
HMGN3-203ENST00000620514 KCNA6P17658 529 aa25.94■■□□□ 1.74
HMGN3-203ENST00000620514 HSPA1LP34931 641 aa25.94■■□□□ 1.74
HMGN3-203ENST00000620514 XIRP1Q702N8 1843 aaKnown RBP25.93■■□□□ 1.74
HMGN3-203ENST00000620514 HDGFP51858 240 aaKnown RBP25.93■■□□□ 1.74
HMGN3-203ENST00000620514 SPHKAPQ2M3C7 1700 aa25.92■■□□□ 1.74
HMGN3-203ENST00000620514 DISP3Q9P2K9 1392 aa25.92■■□□□ 1.74
HMGN3-203ENST00000620514 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.9■■□□□ 1.74
HMGN3-203ENST00000620514 TRIM52Q96A61 297 aa25.89■■□□□ 1.74
HMGN3-203ENST00000620514 RBM33Q96EV2 1170 aaKnown RBP25.89■■□□□ 1.74
HMGN3-203ENST00000620514 TMEM94Q12767 1356 aa25.89■■□□□ 1.74
HMGN3-203ENST00000620514 NWD1Q149M9 1564 aa25.88■■□□□ 1.73
HMGN3-203ENST00000620514 PROSER2Q86WR7 435 aaPredicted RBP25.87■■□□□ 1.73
HMGN3-203ENST00000620514 ADAMTS13Q76LX8 1427 aa25.85■■□□□ 1.73
HMGN3-203ENST00000620514 TBX22Q9Y458 520 aa25.84■■□□□ 1.73
HMGN3-203ENST00000620514 CLTCL1P53675 1640 aa25.84■■□□□ 1.73
HMGN3-203ENST00000620514 NKTRP30414 1462 aaKnown RBP25.84■■□□□ 1.73
HMGN3-203ENST00000620514 TRPM2O94759 1503 aa25.83■■□□□ 1.72
HMGN3-203ENST00000620514 CHD2O14647 1828 aaKnown RBP25.81■■□□□ 1.72
HMGN3-203ENST00000620514 ZNF326Q5BKZ1 582 aaKnown RBP25.8■■□□□ 1.72
HMGN3-203ENST00000620514 SLC4A1APQ9BWU0 796 aaKnown RBP25.79■■□□□ 1.72
HMGN3-203ENST00000620514 DIP2AQ14689 1571 aa25.78■■□□□ 1.72
HMGN3-203ENST00000620514 ILDR2Q71H61 639 aa25.77■■□□□ 1.72
HMGN3-203ENST00000620514 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
HMGN3-203ENST00000620514 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
HMGN3-203ENST00000620514 PIK3R4Q99570 1358 aa25.72■■□□□ 1.71
HMGN3-203ENST00000620514 FOXD1Q16676 465 aa25.72■■□□□ 1.71
HMGN3-203ENST00000620514 KIF1BO60333 1816 aa25.72■■□□□ 1.71
HMGN3-203ENST00000620514 PTPRUQ92729 1446 aa25.71■■□□□ 1.71
HMGN3-203ENST00000620514 MSH6P52701 1360 aa25.71■■□□□ 1.71
HMGN3-203ENST00000620514 SETBP1Q9Y6X0 1596 aa25.71■■□□□ 1.71
HMGN3-203ENST00000620514 FAM135BQ49AJ0 1406 aa25.7■■□□□ 1.7
HMGN3-203ENST00000620514 MED1Q15648 1581 aaPredicted RBP25.69■■□□□ 1.7
HMGN3-203ENST00000620514 AMOTL2Q9Y2J4 779 aa25.68■■□□□ 1.7
HMGN3-203ENST00000620514 ROBO1Q9Y6N7 1651 aa25.65■■□□□ 1.7
HMGN3-203ENST00000620514 MPHOSPH9Q99550 1183 aa25.65■■□□□ 1.7
HMGN3-203ENST00000620514 METP08581 1390 aa25.65■■□□□ 1.7
HMGN3-203ENST00000620514 NCOA3Q9Y6Q9 1424 aa25.64■■□□□ 1.7
HMGN3-203ENST00000620514 C14orf37Q86TY3 774 aa25.64■■□□□ 1.7
HMGN3-203ENST00000620514 SLAIN2Q9P270 581 aa25.63■■□□□ 1.69
HMGN3-203ENST00000620514 XRN1Q8IZH2 1706 aaKnown RBP25.61■■□□□ 1.69
HMGN3-203ENST00000620514 SETD5Q9C0A6 1442 aa25.61■■□□□ 1.69
HMGN3-203ENST00000620514 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.58■■□□□ 1.69
HMGN3-203ENST00000620514 C19orf44Q9H6X5 657 aa25.58■■□□□ 1.69
HMGN3-203ENST00000620514 RPGRIP1LQ68CZ1 1315 aa25.58■■□□□ 1.69
HMGN3-203ENST00000620514 VGFO15240 615 aaPredicted RBP25.57■■□□□ 1.68
HMGN3-203ENST00000620514 CCDC144AA2RUR9 1427 aa25.56■■□□□ 1.68
HMGN3-203ENST00000620514 PPLO60437 1756 aa25.55■■□□□ 1.68
HMGN3-203ENST00000620514 ATF3P18847 181 aa25.54■■□□□ 1.68
HMGN3-203ENST00000620514 CADPS2Q86UW7 1296 aa25.54■■□□□ 1.68
HMGN3-203ENST00000620514 RAB3GAP2Q9H2M9 1393 aa25.53■■□□□ 1.68
HMGN3-203ENST00000620514 SETD1AO15047 1707 aaKnown RBP25.52■■□□□ 1.68
HMGN3-203ENST00000620514 RGL3Q3MIN7 710 aa25.51■■□□□ 1.67
HMGN3-203ENST00000620514 SPATA31E1Q6ZUB1 1445 aa25.51■■□□□ 1.67
HMGN3-203ENST00000620514 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
HMGN3-203ENST00000620514 SOCS7O14512 581 aa25.49■■□□□ 1.67
HMGN3-203ENST00000620514 PHLPP1O60346 1717 aa25.49■■□□□ 1.67
HMGN3-203ENST00000620514 ADGRF5Q8IZF2 1346 aa25.48■■□□□ 1.67
HMGN3-203ENST00000620514 ACIN1Q9UKV3 1341 aaKnown RBP25.48■■□□□ 1.67
HMGN3-203ENST00000620514 DCCP43146 1447 aa25.46■■□□□ 1.67
HMGN3-203ENST00000620514 ADGRL3Q9HAR2 1447 aa25.44■■□□□ 1.66
HMGN3-203ENST00000620514 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
HMGN3-203ENST00000620514 COL16A1Q07092 1604 aaPredicted RBP25.43■■□□□ 1.66
HMGN3-203ENST00000620514 IFT172Q9UG01 1749 aa25.43■■□□□ 1.66
HMGN3-203ENST00000620514 BRINP3Q76B58 766 aa25.42■■□□□ 1.66
HMGN3-203ENST00000620514 MST1RQ04912 1400 aa25.42■■□□□ 1.66
HMGN3-203ENST00000620514 PTCH1Q13635 1447 aa25.42■■□□□ 1.66
HMGN3-203ENST00000620514 NALCNQ8IZF0 1738 aa25.42■■□□□ 1.66
HMGN3-203ENST00000620514 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
HMGN3-203ENST00000620514 AHDC1Q5TGY3 1603 aaPredicted RBP25.4■■□□□ 1.66
HMGN3-203ENST00000620514 RGS17Q9UGC6 210 aaPredicted RBP25.39■■□□□ 1.66
HMGN3-203ENST00000620514 JCADQ9P266 1359 aa25.39■■□□□ 1.65
HMGN3-203ENST00000620514 PRAG1Q86YV5 1406 aa25.38■■□□□ 1.65
HMGN3-203ENST00000620514 ASXL1Q8IXJ9 1541 aa25.37■■□□□ 1.65
HMGN3-203ENST00000620514 PIK3C2GO75747 1445 aa25.34■■□□□ 1.65
HMGN3-203ENST00000620514 TMEM132EQ6IEE7 984 aa25.33■■□□□ 1.65
HMGN3-203ENST00000620514 STK26Q9P289 416 aa25.33■■□□□ 1.65
HMGN3-203ENST00000620514 C1orf167Q5SNV9 1468 aa25.31■■□□□ 1.64
HMGN3-203ENST00000620514 HRCP23327 699 aa25.3■■□□□ 1.64
HMGN3-203ENST00000620514 DDX17Q92841 729 aaKnown RBP25.3■■□□□ 1.64
HMGN3-203ENST00000620514 LRPPRCP42704 1394 aaKnown RBP25.3■■□□□ 1.64
HMGN3-203ENST00000620514 NHSL1Q5SYE7 1610 aa25.28■■□□□ 1.64
HMGN3-203ENST00000620514 LRP6O75581 1613 aa25.27■■□□□ 1.64
HMGN3-203ENST00000620514 WAPLQ7Z5K2 1190 aa25.27■■□□□ 1.64
HMGN3-203ENST00000620514 TECPR2O15040 1411 aa25.27■■□□□ 1.64
HMGN3-203ENST00000620514 MYOM2P54296 1465 aa25.27■■□□□ 1.64
HMGN3-203ENST00000620514 NRXN1Q9ULB1 1477 aa25.27■■□□□ 1.64
HMGN3-203ENST00000620514 SHPRHQ149N8 1683 aa25.26■■□□□ 1.63
HMGN3-203ENST00000620514 SPATA31A6Q5VVP1 1343 aa25.26■■□□□ 1.63
HMGN3-203ENST00000620514 CFAP70Q5T0N1 1121 aa25.25■■□□□ 1.63
HMGN3-203ENST00000620514 POTEAQ6S8J7 498 aa25.25■■□□□ 1.63
HMGN3-203ENST00000620514 ORAI2Q96SN7 254 aa25.25■■□□□ 1.63
HMGN3-203ENST00000620514 C14orf93Q9H972 538 aaKnown RBP25.25■■□□□ 1.63
HMGN3-203ENST00000620514 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms