RNA–Protein interactions for RNA: ENST00000619923.1

SLC46A1-209, Transcript of solute carrier family 46 member 1, humanhuman

Gene SLC46A1, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-209ENST00000619923 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
SLC46A1-209ENST00000619923 RPRD2Q5VT52 1461 aaKnown RBP12.48□□□□□ -0.41
SLC46A1-209ENST00000619923 PHF23Q9BUL5 403 aaPredicted RBP12.48□□□□□ -0.41
SLC46A1-209ENST00000619923 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
SLC46A1-209ENST00000619923 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
SLC46A1-209ENST00000619923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.41
SLC46A1-209ENST00000619923 LRP6O75581 1613 aa12.47□□□□□ -0.41
SLC46A1-209ENST00000619923 ANKRD30AQ9BXX3 1397 aa12.46□□□□□ -0.41
SLC46A1-209ENST00000619923 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.41
SLC46A1-209ENST00000619923 DIP2AQ14689 1571 aa12.46□□□□□ -0.42
SLC46A1-209ENST00000619923 KANK1Q14678 1352 aa12.45□□□□□ -0.42
SLC46A1-209ENST00000619923 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
SLC46A1-209ENST00000619923 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
SLC46A1-209ENST00000619923 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
SLC46A1-209ENST00000619923 CHIC2Q9UKJ5 165 aa12.45□□□□□ -0.42
SLC46A1-209ENST00000619923 ADAMTS13Q76LX8 1427 aa12.45□□□□□ -0.42
SLC46A1-209ENST00000619923 KCNA6P17658 529 aa12.44□□□□□ -0.42
SLC46A1-209ENST00000619923 SPHKAPQ2M3C7 1700 aa12.44□□□□□ -0.42
SLC46A1-209ENST00000619923 ANKRD50Q9ULJ7 1429 aa12.44□□□□□ -0.42
SLC46A1-209ENST00000619923 PLEKHG1Q9ULL1 1385 aa12.43□□□□□ -0.42
SLC46A1-209ENST00000619923 EID1Q9Y6B2 187 aa12.43□□□□□ -0.42
SLC46A1-209ENST00000619923 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
SLC46A1-209ENST00000619923 EP400Q96L91 3159 aa12.42□□□□□ -0.42
SLC46A1-209ENST00000619923 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
SLC46A1-209ENST00000619923 NALCNQ8IZF0 1738 aa12.41□□□□□ -0.42
SLC46A1-209ENST00000619923 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
SLC46A1-209ENST00000619923 MSH6P52701 1360 aa12.38□□□□□ -0.43
SLC46A1-209ENST00000619923 SETBP1Q9Y6X0 1596 aa12.38□□□□□ -0.43
SLC46A1-209ENST00000619923 TRPM2O94759 1503 aa12.37□□□□□ -0.43
SLC46A1-209ENST00000619923 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
SLC46A1-209ENST00000619923 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
SLC46A1-209ENST00000619923 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
SLC46A1-209ENST00000619923 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
SLC46A1-209ENST00000619923 JCADQ9P266 1359 aa12.35□□□□□ -0.43
SLC46A1-209ENST00000619923 LAMC1P11047 1609 aa12.34□□□□□ -0.43
SLC46A1-209ENST00000619923 NEXMIFQ5QGS0 1516 aa12.34□□□□□ -0.43
SLC46A1-209ENST00000619923 ASXL1Q8IXJ9 1541 aa12.34□□□□□ -0.43
SLC46A1-209ENST00000619923 NCOA3Q9Y6Q9 1424 aa12.34□□□□□ -0.43
SLC46A1-209ENST00000619923 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
SLC46A1-209ENST00000619923 KIF1BO60333 1816 aa12.32□□□□□ -0.44
SLC46A1-209ENST00000619923 ROCK1Q13464 1354 aa12.32□□□□□ -0.44
SLC46A1-209ENST00000619923 FAM50AQ14320 339 aaKnown RBP12.31□□□□□ -0.44
SLC46A1-209ENST00000619923 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
SLC46A1-209ENST00000619923 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
SLC46A1-209ENST00000619923 MST1RQ04912 1400 aa12.3□□□□□ -0.44
SLC46A1-209ENST00000619923 TBX22Q9Y458 520 aa12.3□□□□□ -0.44
SLC46A1-209ENST00000619923 DCCP43146 1447 aa12.29□□□□□ -0.44
SLC46A1-209ENST00000619923 PPLO60437 1756 aa12.29□□□□□ -0.44
SLC46A1-209ENST00000619923 APLP2Q06481 763 aa12.28□□□□□ -0.44
SLC46A1-209ENST00000619923 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
SLC46A1-209ENST00000619923 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
SLC46A1-209ENST00000619923 BRINP3Q76B58 766 aa12.26□□□□□ -0.45
SLC46A1-209ENST00000619923 METP08581 1390 aa12.26□□□□□ -0.45
SLC46A1-209ENST00000619923 SETD5Q9C0A6 1442 aa12.26□□□□□ -0.45
SLC46A1-209ENST00000619923 BCANQ96GW7 911 aa12.25□□□□□ -0.45
SLC46A1-209ENST00000619923 SPATA31A6Q5VVP1 1343 aa12.25□□□□□ -0.45
SLC46A1-209ENST00000619923 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
SLC46A1-209ENST00000619923 COL22A1Q8NFW1 1626 aaPredicted RBP12.25□□□□□ -0.45
SLC46A1-209ENST00000619923 IFT172Q9UG01 1749 aa12.25□□□□□ -0.45
SLC46A1-209ENST00000619923 RGS12O14924 1447 aa12.24□□□□□ -0.45
SLC46A1-209ENST00000619923 CDK12Q9NYV4 1490 aaPredicted RBP12.24□□□□□ -0.45
SLC46A1-209ENST00000619923 NUP155O75694 1391 aa12.23□□□□□ -0.45
SLC46A1-209ENST00000619923 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
SLC46A1-209ENST00000619923 PRAG1Q86YV5 1406 aa12.22□□□□□ -0.45
SLC46A1-209ENST00000619923 CADPS2Q86UW7 1296 aa12.22□□□□□ -0.45
SLC46A1-209ENST00000619923 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.22□□□□□ -0.45
SLC46A1-209ENST00000619923 C19orf44Q9H6X5 657 aa12.22□□□□□ -0.45
SLC46A1-209ENST00000619923 AMOTL2Q9Y2J4 779 aa12.22□□□□□ -0.45
SLC46A1-209ENST00000619923 PNPLA6Q8IY17 1366 aa12.21□□□□□ -0.45
SLC46A1-209ENST00000619923 UPF1Q92900 1129 aaKnown RBP eCLIP12.21□□□□□ -0.45
SLC46A1-209ENST00000619923 PTCH1Q13635 1447 aa12.2□□□□□ -0.46
SLC46A1-209ENST00000619923 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
SLC46A1-209ENST00000619923 DDX17Q92841 729 aaKnown RBP12.19□□□□□ -0.46
SLC46A1-209ENST00000619923 KNDC1Q76NI1 1749 aa12.19□□□□□ -0.46
SLC46A1-209ENST00000619923 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
SLC46A1-209ENST00000619923 CDC42BPGQ6DT37 1551 aa12.18□□□□□ -0.46
SLC46A1-209ENST00000619923 ATF3P18847 181 aa12.18□□□□□ -0.46
SLC46A1-209ENST00000619923 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
SLC46A1-209ENST00000619923 NAIPQ13075 1403 aa12.18□□□□□ -0.46
SLC46A1-209ENST00000619923 AFF2P51816 1311 aa12.17□□□□□ -0.46
SLC46A1-209ENST00000619923 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
SLC46A1-209ENST00000619923 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.17□□□□□ -0.46
SLC46A1-209ENST00000619923 RGPD8O14715 1765 aaPredicted RBP12.16□□□□□ -0.46
SLC46A1-209ENST00000619923 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
SLC46A1-209ENST00000619923 ZNF772Q68DY9 489 aaPredicted RBP12.16□□□□□ -0.46
SLC46A1-209ENST00000619923 RRBP1Q9P2E9 1410 aaKnown RBP12.16□□□□□ -0.46
SLC46A1-209ENST00000619923 ABCA3Q99758 1704 aa12.16□□□□□ -0.46
SLC46A1-209ENST00000619923 ROBO2Q9HCK4 1378 aa12.16□□□□□ -0.46
SLC46A1-209ENST00000619923 BRWD3Q6RI45 1802 aa12.15□□□□□ -0.46
SLC46A1-209ENST00000619923 PXDNQ92626 1479 aa12.14□□□□□ -0.47
SLC46A1-209ENST00000619923 FMN2Q9NZ56 1722 aa12.14□□□□□ -0.47
SLC46A1-209ENST00000619923 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
SLC46A1-209ENST00000619923 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
SLC46A1-209ENST00000619923 ITGAEP38570 1179 aa12.14□□□□□ -0.47
SLC46A1-209ENST00000619923 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
SLC46A1-209ENST00000619923 MYOM2P54296 1465 aa12.14□□□□□ -0.47
SLC46A1-209ENST00000619923 PPARGC1BQ86YN6 1023 aaKnown RBP12.12□□□□□ -0.47
SLC46A1-209ENST00000619923 RXRBP28702 533 aa12.11□□□□□ -0.47
SLC46A1-209ENST00000619923 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
SLC46A1-209ENST00000619923 GLI3P10071 1580 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms