RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 HOXB3P14651 431 aaPredicted RBP6.02□□□□□ -1.45
SEC22B-202ENST00000618538 HNRNPUQ00839 825 aaKnown RBP eCLIP6.02□□□□□ -1.45
SEC22B-202ENST00000618538 ZNF687Q8N1G0 1237 aa6.02□□□□□ -1.45
SEC22B-202ENST00000618538 PRKRIP1Q9H875 184 aaPredicted RBP6.02□□□□□ -1.45
SEC22B-202ENST00000618538 SLC24A1O60721 1099 aa6.01□□□□□ -1.45
SEC22B-202ENST00000618538 CHRM1P11229 460 aaPredicted RBP6.01□□□□□ -1.45
SEC22B-202ENST00000618538 CFDP1Q9UEE9 299 aaPredicted RBP6.01□□□□□ -1.45
SEC22B-202ENST00000618538 DHX29Q7Z478 1369 aaKnown RBP6.01□□□□□ -1.45
SEC22B-202ENST00000618538 KIAA1107Q9UPP5 1409 aa6.01□□□□□ -1.45
SEC22B-202ENST00000618538 ATP10BO94823 1461 aa6.01□□□□□ -1.45
SEC22B-202ENST00000618538 ERCC6Q03468 1493 aa6.01□□□□□ -1.45
SEC22B-202ENST00000618538 KDM5CP41229 1560 aa6.01□□□□□ -1.45
SEC22B-202ENST00000618538 IRX6P78412 446 aaPredicted RBP6.01□□□□□ -1.45
SEC22B-202ENST00000618538 GSE1Q14687 1217 aa6□□□□□ -1.45
SEC22B-202ENST00000618538 CHMP7Q8WUX9 453 aaPredicted RBP5.99□□□□□ -1.45
SEC22B-202ENST00000618538 JPH4Q96JJ6 628 aa5.99□□□□□ -1.45
SEC22B-202ENST00000618538 ZNF777Q9ULD5 760 aaPredicted RBP5.99□□□□□ -1.45
SEC22B-202ENST00000618538 ANKRD50Q9ULJ7 1429 aa5.99□□□□□ -1.45
SEC22B-202ENST00000618538 KDM5DQ9BY66 1539 aa5.99□□□□□ -1.45
SEC22B-202ENST00000618538 SHANK2Q9UPX8 1470 aa5.99□□□□□ -1.45
SEC22B-202ENST00000618538 C9orf84Q5VXU9 1444 aa5.98□□□□□ -1.45
SEC22B-202ENST00000618538 PKD2Q13563 968 aa5.98□□□□□ -1.45
SEC22B-202ENST00000618538 CDK11AQ9UQ88 783 aaPredicted RBP5.98□□□□□ -1.45
SEC22B-202ENST00000618538 BOLA1Q9Y3E2 137 aa5.98□□□□□ -1.45
SEC22B-202ENST00000618538 SAMD9LQ8IVG5 1584 aa5.98□□□□□ -1.45
SEC22B-202ENST00000618538 PTPRGP23470 1445 aa5.98□□□□□ -1.45
SEC22B-202ENST00000618538 USP47Q96K76 1375 aa5.98□□□□□ -1.45
SEC22B-202ENST00000618538 NEFLP07196 543 aa5.98□□□□□ -1.45
SEC22B-202ENST00000618538 RBM19Q9Y4C8 960 aaKnown RBP5.98□□□□□ -1.45
SEC22B-202ENST00000618538 UHRF1BP1Q6BDS2 1440 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 CARMIL2Q6F5E8 1435 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 ANKRD30AQ9BXX3 1397 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 PCDHB8Q9UN66 801 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 RALGAPBQ86X10 1494 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 CDC42BPBQ9Y5S2 1711 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 PYGBP11216 843 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 FAM9BQ8IZU0 186 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 MRS2Q9HD23 443 aa5.97□□□□□ -1.45
SEC22B-202ENST00000618538 ARHGEF5Q12774 1597 aa5.96□□□□□ -1.46
SEC22B-202ENST00000618538 RGS20O76081 388 aa5.96□□□□□ -1.46
SEC22B-202ENST00000618538 PREX2Q70Z35 1606 aa5.96□□□□□ -1.46
SEC22B-202ENST00000618538 ZBED9Q6R2W3 1325 aa5.96□□□□□ -1.46
SEC22B-202ENST00000618538 ARHGEF12Q9NZN5 1544 aa5.96□□□□□ -1.46
SEC22B-202ENST00000618538 ZNF326Q5BKZ1 582 aaKnown RBP5.95□□□□□ -1.46
SEC22B-202ENST00000618538 TTC37Q6PGP7 1564 aa5.95□□□□□ -1.46
SEC22B-202ENST00000618538 NUP155O75694 1391 aa5.95□□□□□ -1.46
SEC22B-202ENST00000618538 KIF15Q9NS87 1388 aa5.95□□□□□ -1.46
SEC22B-202ENST00000618538 E9PCH4 1651 aa5.95□□□□□ -1.46
SEC22B-202ENST00000618538 HNRNPMP52272 730 aaKnown RBP eCLIP5.95□□□□□ -1.46
SEC22B-202ENST00000618538 MYT1Q01538 1121 aa5.95□□□□□ -1.46
SEC22B-202ENST00000618538 VARS2Q5ST30 1063 aaKnown RBP5.95□□□□□ -1.46
SEC22B-202ENST00000618538 ERCC6L2Q5T890 1561 aa5.95□□□□□ -1.46
SEC22B-202ENST00000618538 ANP32EQ9BTT0 268 aa5.94□□□□□ -1.46
SEC22B-202ENST00000618538 PLA2R1Q13018 1463 aa5.94□□□□□ -1.46
SEC22B-202ENST00000618538 SENP3-EIF4A1A0A087X0R7 540 aa5.94□□□□□ -1.46
SEC22B-202ENST00000618538 PLEKHD1A6NEE1 506 aa5.94□□□□□ -1.46
SEC22B-202ENST00000618538 PSEN1P49768 467 aa5.94□□□□□ -1.46
SEC22B-202ENST00000618538 SYCP2Q9BX26 1530 aa5.94□□□□□ -1.46
SEC22B-202ENST00000618538 FAM135AQ9P2D6 1515 aa5.94□□□□□ -1.46
SEC22B-202ENST00000618538 CHD1O14646 1710 aa5.93□□□□□ -1.46
SEC22B-202ENST00000618538 CNGB1Q14028 1251 aaPredicted RBP5.93□□□□□ -1.46
SEC22B-202ENST00000618538 CCDC141Q6ZP82 1450 aa5.93□□□□□ -1.46
SEC22B-202ENST00000618538 SHROOM2Q13796 1616 aa5.93□□□□□ -1.46
SEC22B-202ENST00000618538 TRPM1Q7Z4N2 1603 aa5.93□□□□□ -1.46
SEC22B-202ENST00000618538 PDAP1Q13442 181 aaKnown RBP5.93□□□□□ -1.46
SEC22B-202ENST00000618538 AMER1Q5JTC6 1135 aaPredicted RBP5.93□□□□□ -1.46
SEC22B-202ENST00000618538 HCSTQ9UBK5 93 aa5.93□□□□□ -1.46
SEC22B-202ENST00000618538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.92□□□□□ -1.46
SEC22B-202ENST00000618538 PBX2P40425 430 aa5.92□□□□□ -1.46
SEC22B-202ENST00000618538 RTN4Q9NQC3 1192 aaKnown RBP5.92□□□□□ -1.46
SEC22B-202ENST00000618538 PLA2G2EQ9NZK7 142 aa5.92□□□□□ -1.46
SEC22B-202ENST00000618538 UNC13BO14795 1591 aa5.92□□□□□ -1.46
SEC22B-202ENST00000618538 MAST1Q9Y2H9 1570 aa5.91□□□□□ -1.46
SEC22B-202ENST00000618538 POLR3GLQ9BT43 218 aa5.91□□□□□ -1.46
SEC22B-202ENST00000618538 SMG6Q86US8 1419 aaKnown RBP5.91□□□□□ -1.46
SEC22B-202ENST00000618538 A2MP01023 1474 aa5.91□□□□□ -1.46
SEC22B-202ENST00000618538 ST20-MTHFSA0A0A6YYL1 179 aa5.91□□□□□ -1.46
SEC22B-202ENST00000618538 KDM2AQ9Y2K7 1162 aa5.91□□□□□ -1.46
SEC22B-202ENST00000618538 PRAG1Q86YV5 1406 aa5.91□□□□□ -1.46
SEC22B-202ENST00000618538 B4GALNT3Q6L9W6 998 aa5.9□□□□□ -1.46
SEC22B-202ENST00000618538 PNISRQ8TF01 805 aaKnown RBP5.9□□□□□ -1.46
SEC22B-202ENST00000618538 CARD11Q9BXL7 1154 aa5.9□□□□□ -1.46
SEC22B-202ENST00000618538 RNF123Q5XPI4 1314 aa5.9□□□□□ -1.46
SEC22B-202ENST00000618538 LRPPRCP42704 1394 aaKnown RBP5.9□□□□□ -1.47
SEC22B-202ENST00000618538 DCAF11Q8TEB1 546 aa5.9□□□□□ -1.47
SEC22B-202ENST00000618538 PPP4R2Q9NY27 417 aa5.9□□□□□ -1.47
SEC22B-202ENST00000618538 PLXNC1O60486 1568 aa5.9□□□□□ -1.47
SEC22B-202ENST00000618538 ARID4BQ4LE39 1312 aaPredicted RBP5.89□□□□□ -1.47
SEC22B-202ENST00000618538 PLEKHH2Q8IVE3 1493 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 IQGAP3Q86VI3 1631 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 ARHGAP5Q13017 1502 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 MYO5CQ9NQX4 1742 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 TSPY4P0CV99 314 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 TSPY10P0CW01 314 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 NBPF1Q3BBV0 1214 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 MAGI2Q86UL8 1455 aa5.89□□□□□ -1.47
SEC22B-202ENST00000618538 PRDM15P57071 1507 aaPredicted RBP5.88□□□□□ -1.47
SEC22B-202ENST00000618538 ABCC2Q92887 1545 aa5.88□□□□□ -1.47
SEC22B-202ENST00000618538 ROCK2O75116 1388 aaKnown RBP5.88□□□□□ -1.47
SEC22B-202ENST00000618538 GPRASP1Q5JY77 1395 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms