RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-223ENST00000618001 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
TGIF1-223ENST00000618001 FAM50AQ14320 339 aaKnown RBP12.6□□□□□ -0.39
TGIF1-223ENST00000618001 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
TGIF1-223ENST00000618001 PLEKHG1Q9ULL1 1385 aa12.59□□□□□ -0.39
TGIF1-223ENST00000618001 KCNA6P17658 529 aa12.59□□□□□ -0.39
TGIF1-223ENST00000618001 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
TGIF1-223ENST00000618001 DIP2AQ14689 1571 aa12.58□□□□□ -0.4
TGIF1-223ENST00000618001 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
TGIF1-223ENST00000618001 TMEM94Q12767 1356 aa12.57□□□□□ -0.4
TGIF1-223ENST00000618001 CHD2O14647 1828 aaKnown RBP12.56□□□□□ -0.4
TGIF1-223ENST00000618001 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
TGIF1-223ENST00000618001 NCOA3Q9Y6Q9 1424 aa12.55□□□□□ -0.4
TGIF1-223ENST00000618001 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
TGIF1-223ENST00000618001 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
TGIF1-223ENST00000618001 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
TGIF1-223ENST00000618001 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.52□□□□□ -0.4
TGIF1-223ENST00000618001 SLC26A8Q96RN1 970 aa12.52□□□□□ -0.4
TGIF1-223ENST00000618001 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
TGIF1-223ENST00000618001 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
TGIF1-223ENST00000618001 TBX22Q9Y458 520 aa12.51□□□□□ -0.41
TGIF1-223ENST00000618001 RRBP1Q9P2E9 1410 aaKnown RBP12.5□□□□□ -0.41
TGIF1-223ENST00000618001 MSH6P52701 1360 aa12.5□□□□□ -0.41
TGIF1-223ENST00000618001 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
TGIF1-223ENST00000618001 TRPM2O94759 1503 aa12.5□□□□□ -0.41
TGIF1-223ENST00000618001 NUP155O75694 1391 aa12.5□□□□□ -0.41
TGIF1-223ENST00000618001 SETBP1Q9Y6X0 1596 aa12.49□□□□□ -0.41
TGIF1-223ENST00000618001 NRXN3Q9Y4C0 1643 aa12.48□□□□□ -0.41
TGIF1-223ENST00000618001 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
TGIF1-223ENST00000618001 PPP1R15AO75807 674 aaPredicted RBP12.47□□□□□ -0.41
TGIF1-223ENST00000618001 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
TGIF1-223ENST00000618001 PHLPP1O60346 1717 aa12.46□□□□□ -0.42
TGIF1-223ENST00000618001 COL16A1Q07092 1604 aaPredicted RBP12.45□□□□□ -0.42
TGIF1-223ENST00000618001 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
TGIF1-223ENST00000618001 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
TGIF1-223ENST00000618001 BCANQ96GW7 911 aa12.44□□□□□ -0.42
TGIF1-223ENST00000618001 DCCP43146 1447 aa12.44□□□□□ -0.42
TGIF1-223ENST00000618001 SLAIN2Q9P270 581 aa12.44□□□□□ -0.42
TGIF1-223ENST00000618001 CLTCL1P53675 1640 aa12.44□□□□□ -0.42
TGIF1-223ENST00000618001 NAIPQ13075 1403 aa12.44□□□□□ -0.42
TGIF1-223ENST00000618001 PTPRUQ92729 1446 aa12.43□□□□□ -0.42
TGIF1-223ENST00000618001 RGS17Q9UGC6 210 aaPredicted RBP12.43□□□□□ -0.42
TGIF1-223ENST00000618001 NEXMIFQ5QGS0 1516 aa12.43□□□□□ -0.42
TGIF1-223ENST00000618001 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
TGIF1-223ENST00000618001 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
TGIF1-223ENST00000618001 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
TGIF1-223ENST00000618001 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
TGIF1-223ENST00000618001 JCADQ9P266 1359 aa12.41□□□□□ -0.42
TGIF1-223ENST00000618001 C19orf44Q9H6X5 657 aa12.4□□□□□ -0.42
TGIF1-223ENST00000618001 PRAG1Q86YV5 1406 aa12.4□□□□□ -0.42
TGIF1-223ENST00000618001 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.43
TGIF1-223ENST00000618001 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.43
TGIF1-223ENST00000618001 ITGAEP38570 1179 aa12.39□□□□□ -0.43
TGIF1-223ENST00000618001 KIF1BO60333 1816 aa12.39□□□□□ -0.43
TGIF1-223ENST00000618001 SETD1AO15047 1707 aaKnown RBP12.38□□□□□ -0.43
TGIF1-223ENST00000618001 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
TGIF1-223ENST00000618001 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
TGIF1-223ENST00000618001 NHSL1Q5SYE7 1610 aa12.37□□□□□ -0.43
TGIF1-223ENST00000618001 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
TGIF1-223ENST00000618001 ASXL1Q8IXJ9 1541 aa12.36□□□□□ -0.43
TGIF1-223ENST00000618001 METP08581 1390 aa12.36□□□□□ -0.43
TGIF1-223ENST00000618001 PTCH1Q13635 1447 aa12.35□□□□□ -0.43
TGIF1-223ENST00000618001 ATF3P18847 181 aa12.35□□□□□ -0.43
TGIF1-223ENST00000618001 MST1RQ04912 1400 aa12.35□□□□□ -0.43
TGIF1-223ENST00000618001 NALCNQ8IZF0 1738 aa12.35□□□□□ -0.43
TGIF1-223ENST00000618001 LRP6O75581 1613 aa12.35□□□□□ -0.43
TGIF1-223ENST00000618001 LAMC1P11047 1609 aa12.35□□□□□ -0.43
TGIF1-223ENST00000618001 ADGRL3Q9HAR2 1447 aa12.35□□□□□ -0.43
TGIF1-223ENST00000618001 PPARGC1BQ86YN6 1023 aaKnown RBP12.35□□□□□ -0.43
TGIF1-223ENST00000618001 PPLO60437 1756 aa12.33□□□□□ -0.43
TGIF1-223ENST00000618001 POTEAQ6S8J7 498 aa12.33□□□□□ -0.44
TGIF1-223ENST00000618001 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
TGIF1-223ENST00000618001 SETD5Q9C0A6 1442 aa12.33□□□□□ -0.44
TGIF1-223ENST00000618001 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
TGIF1-223ENST00000618001 RPGRIP1LQ68CZ1 1315 aa12.33□□□□□ -0.44
TGIF1-223ENST00000618001 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
TGIF1-223ENST00000618001 VGFO15240 615 aaPredicted RBP12.29□□□□□ -0.44
TGIF1-223ENST00000618001 IFT172Q9UG01 1749 aa12.29□□□□□ -0.44
TGIF1-223ENST00000618001 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.44
TGIF1-223ENST00000618001 C1orf167Q5SNV9 1468 aa12.27□□□□□ -0.45
TGIF1-223ENST00000618001 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.45
TGIF1-223ENST00000618001 ZNF772Q68DY9 489 aaPredicted RBP12.27□□□□□ -0.45
TGIF1-223ENST00000618001 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
TGIF1-223ENST00000618001 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
TGIF1-223ENST00000618001 ROBO2Q9HCK4 1378 aa12.26□□□□□ -0.45
TGIF1-223ENST00000618001 SPATA31E1Q6ZUB1 1445 aa12.26□□□□□ -0.45
TGIF1-223ENST00000618001 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
TGIF1-223ENST00000618001 TECPR2O15040 1411 aa12.25□□□□□ -0.45
TGIF1-223ENST00000618001 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
TGIF1-223ENST00000618001 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
TGIF1-223ENST00000618001 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
TGIF1-223ENST00000618001 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
TGIF1-223ENST00000618001 CCDC144AA2RUR9 1427 aa12.24□□□□□ -0.45
TGIF1-223ENST00000618001 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
TGIF1-223ENST00000618001 MEX3CQ5U5Q3 659 aaKnown RBP12.23□□□□□ -0.45
TGIF1-223ENST00000618001 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
TGIF1-223ENST00000618001 PIK3C2GO75747 1445 aa12.21□□□□□ -0.45
TGIF1-223ENST00000618001 SOS2Q07890 1332 aaPredicted RBP12.21□□□□□ -0.45
TGIF1-223ENST00000618001 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
TGIF1-223ENST00000618001 LRPPRCP42704 1394 aaKnown RBP12.19□□□□□ -0.46
TGIF1-223ENST00000618001 MPHOSPH9Q99550 1183 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms