RNA–Protein interactions for RNA: ENST00000617548.1

ACACA-239, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,063 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-239ENST00000617548 SLC26A8Q96RN1 970 aa34.52■■■■□ 3.12
ACACA-239ENST00000617548 SLC4A1APQ9BWU0 796 aaKnown RBP34.52■■■■□ 3.12
ACACA-239ENST00000617548 ZFYVE9O95405 1425 aa34.52■■■■□ 3.12
ACACA-239ENST00000617548 SENP3Q9H4L4 574 aaPredicted RBP34.51■■■■□ 3.12
ACACA-239ENST00000617548 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.5■■■■□ 3.11
ACACA-239ENST00000617548 NUTM2DQ5VT03 806 aaPredicted RBP34.46■■■■□ 3.11
ACACA-239ENST00000617548 PLEKHG1Q9ULL1 1385 aa34.46■■■■□ 3.11
ACACA-239ENST00000617548 LRRC7Q96NW7 1537 aa34.44■■■■□ 3.1
ACACA-239ENST00000617548 TRPM2O94759 1503 aa34.43■■■■□ 3.1
ACACA-239ENST00000617548 TOM1O60784 492 aa34.42■■■■□ 3.1
ACACA-239ENST00000617548 ZNF326Q5BKZ1 582 aaKnown RBP34.42■■■■□ 3.1
ACACA-239ENST00000617548 CLTCL1P53675 1640 aa34.41■■■■□ 3.1
ACACA-239ENST00000617548 SCAF1Q9H7N4 1312 aaKnown RBP34.38■■■■□ 3.09
ACACA-239ENST00000617548 KCNA6P17658 529 aa34.38■■■■□ 3.09
ACACA-239ENST00000617548 SETD5Q9C0A6 1442 aa34.37■■■■□ 3.09
ACACA-239ENST00000617548 PIP4K2BP78356 416 aa34.35■■■■□ 3.09
ACACA-239ENST00000617548 KIF1BO60333 1816 aa34.34■■■■□ 3.09
ACACA-239ENST00000617548 ACIN1Q9UKV3 1341 aaKnown RBP34.33■■■■□ 3.09
ACACA-239ENST00000617548 FOXD1Q16676 465 aa34.33■■■■□ 3.09
ACACA-239ENST00000617548 MPHOSPH9Q99550 1183 aa34.32■■■■□ 3.08
ACACA-239ENST00000617548 TBX22Q9Y458 520 aa34.31■■■■□ 3.08
ACACA-239ENST00000617548 PROSER2Q86WR7 435 aaPredicted RBP34.29■■■■□ 3.08
ACACA-239ENST00000617548 ADAMTS13Q76LX8 1427 aa34.26■■■■□ 3.07
ACACA-239ENST00000617548 NWD1Q149M9 1564 aa34.26■■■■□ 3.07
ACACA-239ENST00000617548 XIRP1Q702N8 1843 aaKnown RBP34.25■■■■□ 3.07
ACACA-239ENST00000617548 TMEM94Q12767 1356 aa34.24■■■■□ 3.07
ACACA-239ENST00000617548 RAB3GAP2Q9H2M9 1393 aa34.24■■■■□ 3.07
ACACA-239ENST00000617548 DIP2AQ14689 1571 aa34.24■■■■□ 3.07
ACACA-239ENST00000617548 NKTRP30414 1462 aaKnown RBP34.24■■■■□ 3.07
ACACA-239ENST00000617548 CHD2O14647 1828 aaKnown RBP34.23■■■■□ 3.07
ACACA-239ENST00000617548 RBM33Q96EV2 1170 aaKnown RBP34.22■■■■□ 3.07
ACACA-239ENST00000617548 NEXMIFQ5QGS0 1516 aa34.2■■■■□ 3.07
ACACA-239ENST00000617548 ALKQ9UM73 1620 aa34.19■■■■□ 3.06
ACACA-239ENST00000617548 CCDC144AA2RUR9 1427 aa34.18■■■■□ 3.06
ACACA-239ENST00000617548 PIK3R4Q99570 1358 aa34.17■■■■□ 3.06
ACACA-239ENST00000617548 SETBP1Q9Y6X0 1596 aa34.16■■■■□ 3.06
ACACA-239ENST00000617548 RPGRIP1LQ68CZ1 1315 aa34.13■■■■□ 3.05
ACACA-239ENST00000617548 NRXN3Q9Y4C0 1643 aa34.13■■■■□ 3.05
ACACA-239ENST00000617548 VGFO15240 615 aaPredicted RBP34.13■■■■□ 3.05
ACACA-239ENST00000617548 HSPA1LP34931 641 aa34.12■■■■□ 3.05
ACACA-239ENST00000617548 AMOTL2Q9Y2J4 779 aa34.1■■■■□ 3.05
ACACA-239ENST00000617548 MSH6P52701 1360 aa34.1■■■■□ 3.05
ACACA-239ENST00000617548 C14orf37Q86TY3 774 aa34.08■■■■□ 3.05
ACACA-239ENST00000617548 RGL3Q3MIN7 710 aa34.07■■■■□ 3.04
ACACA-239ENST00000617548 PTPRUQ92729 1446 aa34.05■■■■□ 3.04
ACACA-239ENST00000617548 PPLO60437 1756 aa34.04■■■■□ 3.04
ACACA-239ENST00000617548 METP08581 1390 aa34.04■■■■□ 3.04
ACACA-239ENST00000617548 HRCP23327 699 aa34.01■■■■□ 3.03
ACACA-239ENST00000617548 NCOA3Q9Y6Q9 1424 aa34.01■■■■□ 3.03
ACACA-239ENST00000617548 SPATA31E1Q6ZUB1 1445 aa34■■■■□ 3.03
ACACA-239ENST00000617548 XRN1Q8IZH2 1706 aaKnown RBP33.97■■■■□ 3.03
ACACA-239ENST00000617548 DISP3Q9P2K9 1392 aa33.95■■■■□ 3.02
ACACA-239ENST00000617548 ANKRD30BQ9BXX2 1392 aa33.94■■■■□ 3.02
ACACA-239ENST00000617548 FAM135BQ49AJ0 1406 aa33.94■■■■□ 3.02
ACACA-239ENST00000617548 C19orf44Q9H6X5 657 aa33.93■■■■□ 3.02
ACACA-239ENST00000617548 SLAIN2Q9P270 581 aa33.93■■■■□ 3.02
ACACA-239ENST00000617548 ADGRF5Q8IZF2 1346 aa33.91■■■■□ 3.02
ACACA-239ENST00000617548 ATF3P18847 181 aa33.91■■■■□ 3.02
ACACA-239ENST00000617548 ROBO1Q9Y6N7 1651 aa33.9■■■■□ 3.02
ACACA-239ENST00000617548 CADPS2Q86UW7 1296 aa33.89■■■■□ 3.02
ACACA-239ENST00000617548 SETD1AO15047 1707 aaKnown RBP33.89■■■■□ 3.02
ACACA-239ENST00000617548 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.89■■■■□ 3.02
ACACA-239ENST00000617548 IFT172Q9UG01 1749 aa33.89■■■■□ 3.02
ACACA-239ENST00000617548 DCCP43146 1447 aa33.78■■■■□ 3
ACACA-239ENST00000617548 PTCH1Q13635 1447 aa33.78■■■■□ 3
ACACA-239ENST00000617548 PIK3C2GO75747 1445 aa33.77■■■■□ 3
ACACA-239ENST00000617548 ROBO2Q9HCK4 1378 aa33.76■■■■□ 3
ACACA-239ENST00000617548 ADGRL3Q9HAR2 1447 aa33.75■■■□□ 2.99
ACACA-239ENST00000617548 STK26Q9P289 416 aa33.73■■■□□ 2.99
ACACA-239ENST00000617548 MED1Q15648 1581 aaPredicted RBP33.72■■■□□ 2.99
ACACA-239ENST00000617548 MYOM2P54296 1465 aa33.72■■■□□ 2.99
ACACA-239ENST00000617548 NALCNQ8IZF0 1738 aa33.72■■■□□ 2.99
ACACA-239ENST00000617548 TMEM132EQ6IEE7 984 aa33.71■■■□□ 2.99
ACACA-239ENST00000617548 PRAG1Q86YV5 1406 aa33.7■■■□□ 2.99
ACACA-239ENST00000617548 PHLPP1O60346 1717 aa33.7■■■□□ 2.99
ACACA-239ENST00000617548 C14orf93Q9H972 538 aaKnown RBP33.67■■■□□ 2.98
ACACA-239ENST00000617548 NRXN1Q9ULB1 1477 aa33.67■■■□□ 2.98
ACACA-239ENST00000617548 LRPPRCP42704 1394 aaKnown RBP33.66■■■□□ 2.98
ACACA-239ENST00000617548 MST1RQ04912 1400 aa33.66■■■□□ 2.98
ACACA-239ENST00000617548 KDM2AQ9Y2K7 1162 aa33.66■■■□□ 2.98
ACACA-239ENST00000617548 BRINP3Q76B58 766 aa33.65■■■□□ 2.98
ACACA-239ENST00000617548 DCAF11Q8TEB1 546 aa33.65■■■□□ 2.98
ACACA-239ENST00000617548 CFAP70Q5T0N1 1121 aa33.64■■■□□ 2.98
ACACA-239ENST00000617548 ASXL1Q8IXJ9 1541 aa33.63■■■□□ 2.97
ACACA-239ENST00000617548 LAMC1P11047 1609 aa33.62■■■□□ 2.97
ACACA-239ENST00000617548 ABCC11Q96J66 1382 aa33.61■■■□□ 2.97
ACACA-239ENST00000617548 PHF23Q9BUL5 403 aaPredicted RBP33.61■■■□□ 2.97
ACACA-239ENST00000617548 TECPR2O15040 1411 aa33.61■■■□□ 2.97
ACACA-239ENST00000617548 YTHDC2Q9H6S0 1430 aaKnown RBP33.61■■■□□ 2.97
ACACA-239ENST00000617548 WAPLQ7Z5K2 1190 aa33.59■■■□□ 2.97
ACACA-239ENST00000617548 DHX57Q6P158 1386 aaKnown RBP33.59■■■□□ 2.97
ACACA-239ENST00000617548 ILDR2Q71H61 639 aa33.58■■■□□ 2.97
ACACA-239ENST00000617548 KNDC1Q76NI1 1749 aa33.58■■■□□ 2.97
ACACA-239ENST00000617548 AHDC1Q5TGY3 1603 aaPredicted RBP33.57■■■□□ 2.97
ACACA-239ENST00000617548 STAC3Q96MF2 364 aa33.57■■■□□ 2.96
ACACA-239ENST00000617548 COL16A1Q07092 1604 aaPredicted RBP33.57■■■□□ 2.96
ACACA-239ENST00000617548 JCADQ9P266 1359 aa33.55■■■□□ 2.96
ACACA-239ENST00000617548 C1orf167Q5SNV9 1468 aa33.54■■■□□ 2.96
ACACA-239ENST00000617548 PLEKHH1Q9ULM0 1364 aa33.51■■■□□ 2.96
ACACA-239ENST00000617548 SIRT1Q96EB6 747 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms