RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 HSPA1LP34931 641 aa33.89■■■■□ 3.02
NEDD4L-237ENST00000617539 RIMS2Q9UQ26 1411 aa33.88■■■■□ 3.01
NEDD4L-237ENST00000617539 NWD1Q149M9 1564 aa33.86■■■■□ 3.01
NEDD4L-237ENST00000617539 NAIPQ13075 1403 aa33.85■■■■□ 3.01
NEDD4L-237ENST00000617539 SPHKAPQ2M3C7 1700 aa33.84■■■■□ 3.01
NEDD4L-237ENST00000617539 PLEKHG1Q9ULL1 1385 aa33.84■■■■□ 3.01
NEDD4L-237ENST00000617539 KCNA6P17658 529 aa33.81■■■■□ 3
NEDD4L-237ENST00000617539 ILDR2Q71H61 639 aa33.8■■■■□ 3
NEDD4L-237ENST00000617539 SENP3Q9H4L4 574 aaPredicted RBP33.8■■■■□ 3
NEDD4L-237ENST00000617539 CHD2O14647 1828 aaKnown RBP33.79■■■■□ 3
NEDD4L-237ENST00000617539 TMEM94Q12767 1356 aa33.78■■■■□ 3
NEDD4L-237ENST00000617539 CHGAP10645 457 aaKnown RBP33.78■■■■□ 3
NEDD4L-237ENST00000617539 NKTRP30414 1462 aaKnown RBP33.77■■■■□ 3
NEDD4L-237ENST00000617539 PPP1R15AO75807 674 aaPredicted RBP33.74■■■□□ 2.99
NEDD4L-237ENST00000617539 BCANQ96GW7 911 aa33.74■■■□□ 2.99
NEDD4L-237ENST00000617539 HFM1A2PYH4 1435 aa33.72■■■□□ 2.99
NEDD4L-237ENST00000617539 ADAMTS13Q76LX8 1427 aa33.71■■■□□ 2.99
NEDD4L-237ENST00000617539 HDGFP51858 240 aaKnown RBP33.71■■■□□ 2.99
NEDD4L-237ENST00000617539 NUTM2DQ5VT03 806 aaPredicted RBP33.71■■■□□ 2.99
NEDD4L-237ENST00000617539 RBM33Q96EV2 1170 aaKnown RBP33.71■■■□□ 2.99
NEDD4L-237ENST00000617539 MED1Q15648 1581 aaPredicted RBP33.7■■■□□ 2.99
NEDD4L-237ENST00000617539 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.7■■■□□ 2.99
NEDD4L-237ENST00000617539 CLTCL1P53675 1640 aa33.69■■■□□ 2.98
NEDD4L-237ENST00000617539 PROSER2Q86WR7 435 aaPredicted RBP33.68■■■□□ 2.98
NEDD4L-237ENST00000617539 DIP2AQ14689 1571 aa33.68■■■□□ 2.98
NEDD4L-237ENST00000617539 TRPM2O94759 1503 aa33.67■■■□□ 2.98
NEDD4L-237ENST00000617539 TBX22Q9Y458 520 aa33.66■■■□□ 2.98
NEDD4L-237ENST00000617539 NRXN3Q9Y4C0 1643 aa33.64■■■□□ 2.98
NEDD4L-237ENST00000617539 FAM135BQ49AJ0 1406 aa33.59■■■□□ 2.97
NEDD4L-237ENST00000617539 ROBO1Q9Y6N7 1651 aa33.58■■■□□ 2.97
NEDD4L-237ENST00000617539 SETBP1Q9Y6X0 1596 aa33.57■■■□□ 2.96
NEDD4L-237ENST00000617539 KIF1BO60333 1816 aa33.56■■■□□ 2.96
NEDD4L-237ENST00000617539 NEXMIFQ5QGS0 1516 aa33.56■■■□□ 2.96
NEDD4L-237ENST00000617539 PIK3R4Q99570 1358 aa33.55■■■□□ 2.96
NEDD4L-237ENST00000617539 PTPRUQ92729 1446 aa33.53■■■□□ 2.96
NEDD4L-237ENST00000617539 MSH6P52701 1360 aa33.53■■■□□ 2.96
NEDD4L-237ENST00000617539 TRIM52Q96A61 297 aa33.52■■■□□ 2.96
NEDD4L-237ENST00000617539 XRN1Q8IZH2 1706 aaKnown RBP33.5■■■□□ 2.95
NEDD4L-237ENST00000617539 ZNF326Q5BKZ1 582 aaKnown RBP33.49■■■□□ 2.95
NEDD4L-237ENST00000617539 NCOA3Q9Y6Q9 1424 aa33.48■■■□□ 2.95
NEDD4L-237ENST00000617539 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.46■■■□□ 2.95
NEDD4L-237ENST00000617539 SOCS7O14512 581 aa33.46■■■□□ 2.95
NEDD4L-237ENST00000617539 SLC4A1APQ9BWU0 796 aaKnown RBP33.45■■■□□ 2.95
NEDD4L-237ENST00000617539 AMOTL2Q9Y2J4 779 aa33.43■■■□□ 2.94
NEDD4L-237ENST00000617539 SLAIN2Q9P270 581 aa33.42■■■□□ 2.94
NEDD4L-237ENST00000617539 METP08581 1390 aa33.42■■■□□ 2.94
NEDD4L-237ENST00000617539 SETD1AO15047 1707 aaKnown RBP33.38■■■□□ 2.93
NEDD4L-237ENST00000617539 PHLPP1O60346 1717 aa33.37■■■□□ 2.93
NEDD4L-237ENST00000617539 FOXD1Q16676 465 aa33.36■■■□□ 2.93
NEDD4L-237ENST00000617539 PPLO60437 1756 aa33.36■■■□□ 2.93
NEDD4L-237ENST00000617539 C14orf37Q86TY3 774 aa33.35■■■□□ 2.93
NEDD4L-237ENST00000617539 C19orf44Q9H6X5 657 aa33.33■■■□□ 2.93
NEDD4L-237ENST00000617539 COL16A1Q07092 1604 aaPredicted RBP33.31■■■□□ 2.92
NEDD4L-237ENST00000617539 PHF23Q9BUL5 403 aaPredicted RBP33.3■■■□□ 2.92
NEDD4L-237ENST00000617539 CADPS2Q86UW7 1296 aa33.29■■■□□ 2.92
NEDD4L-237ENST00000617539 DCCP43146 1447 aa33.27■■■□□ 2.92
NEDD4L-237ENST00000617539 NALCNQ8IZF0 1738 aa33.26■■■□□ 2.92
NEDD4L-237ENST00000617539 ATF3P18847 181 aa33.25■■■□□ 2.91
NEDD4L-237ENST00000617539 MPHOSPH9Q99550 1183 aa33.25■■■□□ 2.91
NEDD4L-237ENST00000617539 RPGRIP1LQ68CZ1 1315 aa33.25■■■□□ 2.91
NEDD4L-237ENST00000617539 VGFO15240 615 aaPredicted RBP33.24■■■□□ 2.91
NEDD4L-237ENST00000617539 AHDC1Q5TGY3 1603 aaPredicted RBP33.24■■■□□ 2.91
NEDD4L-237ENST00000617539 IFT172Q9UG01 1749 aa33.22■■■□□ 2.91
NEDD4L-237ENST00000617539 RGS17Q9UGC6 210 aaPredicted RBP33.22■■■□□ 2.91
NEDD4L-237ENST00000617539 CCDC144AA2RUR9 1427 aa33.21■■■□□ 2.91
NEDD4L-237ENST00000617539 SPATA31E1Q6ZUB1 1445 aa33.21■■■□□ 2.91
NEDD4L-237ENST00000617539 SETD5Q9C0A6 1442 aa33.19■■■□□ 2.9
NEDD4L-237ENST00000617539 ADGRL3Q9HAR2 1447 aa33.19■■■□□ 2.9
NEDD4L-237ENST00000617539 MST1RQ04912 1400 aa33.19■■■□□ 2.9
NEDD4L-237ENST00000617539 PTCH1Q13635 1447 aa33.17■■■□□ 2.9
NEDD4L-237ENST00000617539 PRAG1Q86YV5 1406 aa33.17■■■□□ 2.9
NEDD4L-237ENST00000617539 BRINP3Q76B58 766 aa33.16■■■□□ 2.9
NEDD4L-237ENST00000617539 JCADQ9P266 1359 aa33.16■■■□□ 2.9
NEDD4L-237ENST00000617539 ASXL1Q8IXJ9 1541 aa33.15■■■□□ 2.9
NEDD4L-237ENST00000617539 ROBO2Q9HCK4 1378 aa33.14■■■□□ 2.9
NEDD4L-237ENST00000617539 SHPRHQ149N8 1683 aa33.11■■■□□ 2.89
NEDD4L-237ENST00000617539 ADGRF5Q8IZF2 1346 aa33.11■■■□□ 2.89
NEDD4L-237ENST00000617539 NHSL1Q5SYE7 1610 aa33.11■■■□□ 2.89
NEDD4L-237ENST00000617539 RAB3GAP2Q9H2M9 1393 aa33.09■■■□□ 2.89
NEDD4L-237ENST00000617539 RGL3Q3MIN7 710 aa33.08■■■□□ 2.89
NEDD4L-237ENST00000617539 LRP6O75581 1613 aa33.07■■■□□ 2.88
NEDD4L-237ENST00000617539 ACIN1Q9UKV3 1341 aaKnown RBP33.05■■■□□ 2.88
NEDD4L-237ENST00000617539 ANKRD30BQ9BXX2 1392 aa33.04■■■□□ 2.88
NEDD4L-237ENST00000617539 PIK3C2GO75747 1445 aa33.02■■■□□ 2.88
NEDD4L-237ENST00000617539 C1orf167Q5SNV9 1468 aa33■■■□□ 2.87
NEDD4L-237ENST00000617539 POTEAQ6S8J7 498 aa33■■■□□ 2.87
NEDD4L-237ENST00000617539 SPATA31A6Q5VVP1 1343 aa32.99■■■□□ 2.87
NEDD4L-237ENST00000617539 LAMC1P11047 1609 aa32.97■■■□□ 2.87
NEDD4L-237ENST00000617539 KNDC1Q76NI1 1749 aa32.97■■■□□ 2.87
NEDD4L-237ENST00000617539 TECPR2O15040 1411 aa32.95■■■□□ 2.87
NEDD4L-237ENST00000617539 DDX17Q92841 729 aaKnown RBP32.95■■■□□ 2.87
NEDD4L-237ENST00000617539 NRXN1Q9ULB1 1477 aa32.93■■■□□ 2.86
NEDD4L-237ENST00000617539 CDC42BPGQ6DT37 1551 aa32.93■■■□□ 2.86
NEDD4L-237ENST00000617539 LRPPRCP42704 1394 aaKnown RBP32.92■■■□□ 2.86
NEDD4L-237ENST00000617539 MYOM2P54296 1465 aa32.91■■■□□ 2.86
NEDD4L-237ENST00000617539 TMEM132EQ6IEE7 984 aa32.89■■■□□ 2.86
NEDD4L-237ENST00000617539 STK26Q9P289 416 aa32.88■■■□□ 2.85
NEDD4L-237ENST00000617539 ABCC11Q96J66 1382 aa32.87■■■□□ 2.85
NEDD4L-237ENST00000617539 ORAI2Q96SN7 254 aa32.87■■■□□ 2.85
NEDD4L-237ENST00000617539 WAPLQ7Z5K2 1190 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms