RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 NUTM2DQ5VT03 806 aaPredicted RBP24.07■■□□□ 1.44
AP3S2-216ENST00000617003 ZFYVE9O95405 1425 aa24.06■■□□□ 1.44
AP3S2-216ENST00000617003 IQGAP1P46940 1657 aa24.06■■□□□ 1.44
AP3S2-216ENST00000617003 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.05■■□□□ 1.44
AP3S2-216ENST00000617003 CCDC144AA2RUR9 1427 aa24.04■■□□□ 1.44
AP3S2-216ENST00000617003 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
AP3S2-216ENST00000617003 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
AP3S2-216ENST00000617003 ZNF335Q9H4Z2 1342 aaPredicted RBP24.02■■□□□ 1.44
AP3S2-216ENST00000617003 BCANQ96GW7 911 aa24.01■■□□□ 1.43
AP3S2-216ENST00000617003 ANKRD30BQ9BXX2 1392 aa24.01■■□□□ 1.43
AP3S2-216ENST00000617003 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
AP3S2-216ENST00000617003 SLC26A8Q96RN1 970 aa23.98■■□□□ 1.43
AP3S2-216ENST00000617003 PLEKHG1Q9ULL1 1385 aa23.98■■□□□ 1.43
AP3S2-216ENST00000617003 LTBP4Q8N2S1 1624 aa23.95■■□□□ 1.42
AP3S2-216ENST00000617003 RPGRIP1LQ68CZ1 1315 aa23.95■■□□□ 1.42
AP3S2-216ENST00000617003 CERKQ8TCT0 537 aa23.95■■□□□ 1.42
AP3S2-216ENST00000617003 NEXMIFQ5QGS0 1516 aa23.94■■□□□ 1.42
AP3S2-216ENST00000617003 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
AP3S2-216ENST00000617003 SPATA31E1Q6ZUB1 1445 aa23.93■■□□□ 1.42
AP3S2-216ENST00000617003 VGFO15240 615 aaPredicted RBP23.91■■□□□ 1.42
AP3S2-216ENST00000617003 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
AP3S2-216ENST00000617003 STRCP1A6NGW2 1772 aa23.88■■□□□ 1.41
AP3S2-216ENST00000617003 PPLO60437 1756 aa23.88■■□□□ 1.41
AP3S2-216ENST00000617003 ADAMTS13Q76LX8 1427 aa23.87■■□□□ 1.41
AP3S2-216ENST00000617003 DHX57Q6P158 1386 aaKnown RBP23.86■■□□□ 1.41
AP3S2-216ENST00000617003 KCNA6P17658 529 aa23.85■■□□□ 1.41
AP3S2-216ENST00000617003 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.41
AP3S2-216ENST00000617003 NRXN3Q9Y4C0 1643 aa23.83■■□□□ 1.4
AP3S2-216ENST00000617003 CPS1P31327 1500 aa23.82■■□□□ 1.4
AP3S2-216ENST00000617003 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
AP3S2-216ENST00000617003 IFT172Q9UG01 1749 aa23.81■■□□□ 1.4
AP3S2-216ENST00000617003 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
AP3S2-216ENST00000617003 DIP2AQ14689 1571 aa23.8■■□□□ 1.4
AP3S2-216ENST00000617003 SIN3AQ96ST3 1273 aa23.78■■□□□ 1.4
AP3S2-216ENST00000617003 PIK3R4Q99570 1358 aa23.77■■□□□ 1.4
AP3S2-216ENST00000617003 LRRC7Q96NW7 1537 aa23.76■■□□□ 1.39
AP3S2-216ENST00000617003 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
AP3S2-216ENST00000617003 KDM2AQ9Y2K7 1162 aa23.76■■□□□ 1.39
AP3S2-216ENST00000617003 METP08581 1390 aa23.76■■□□□ 1.39
AP3S2-216ENST00000617003 AMOTL2Q9Y2J4 779 aa23.75■■□□□ 1.39
AP3S2-216ENST00000617003 PROSER2Q86WR7 435 aaPredicted RBP23.74■■□□□ 1.39
AP3S2-216ENST00000617003 PTPRUQ92729 1446 aa23.74■■□□□ 1.39
AP3S2-216ENST00000617003 ALKQ9UM73 1620 aa23.74■■□□□ 1.39
AP3S2-216ENST00000617003 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
AP3S2-216ENST00000617003 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
AP3S2-216ENST00000617003 NWD1Q149M9 1564 aa23.73■■□□□ 1.39
AP3S2-216ENST00000617003 RBM33Q96EV2 1170 aaKnown RBP23.73■■□□□ 1.39
AP3S2-216ENST00000617003 FBXO41Q8TF61 875 aa23.72■■□□□ 1.39
AP3S2-216ENST00000617003 SETD1AO15047 1707 aaKnown RBP23.71■■□□□ 1.39
AP3S2-216ENST00000617003 XIRP1Q702N8 1843 aaKnown RBP23.7■■□□□ 1.38
AP3S2-216ENST00000617003 MYOM2P54296 1465 aa23.69■■□□□ 1.38
AP3S2-216ENST00000617003 STAC3Q96MF2 364 aa23.69■■□□□ 1.38
AP3S2-216ENST00000617003 PIK3C2GO75747 1445 aa23.69■■□□□ 1.38
AP3S2-216ENST00000617003 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
AP3S2-216ENST00000617003 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
AP3S2-216ENST00000617003 NRXN1Q9ULB1 1477 aa23.68■■□□□ 1.38
AP3S2-216ENST00000617003 ILDR1Q86SU0 546 aaPredicted RBP23.68■■□□□ 1.38
AP3S2-216ENST00000617003 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
AP3S2-216ENST00000617003 C14orf93Q9H972 538 aaKnown RBP23.67■■□□□ 1.38
AP3S2-216ENST00000617003 UBAP1LF5GYI3 381 aa23.65■■□□□ 1.38
AP3S2-216ENST00000617003 TMEM132EQ6IEE7 984 aa23.65■■□□□ 1.38
AP3S2-216ENST00000617003 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.37
AP3S2-216ENST00000617003 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
AP3S2-216ENST00000617003 TOM1O60784 492 aa23.61■■□□□ 1.37
AP3S2-216ENST00000617003 STK26Q9P289 416 aa23.61■■□□□ 1.37
AP3S2-216ENST00000617003 C14orf37Q86TY3 774 aa23.58■■□□□ 1.37
AP3S2-216ENST00000617003 ASXL1Q8IXJ9 1541 aa23.57■■□□□ 1.36
AP3S2-216ENST00000617003 NCOA3Q9Y6Q9 1424 aa23.57■■□□□ 1.36
AP3S2-216ENST00000617003 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
AP3S2-216ENST00000617003 LAMC1P11047 1609 aa23.56■■□□□ 1.36
AP3S2-216ENST00000617003 LRPPRCP42704 1394 aaKnown RBP23.56■■□□□ 1.36
AP3S2-216ENST00000617003 PIP4K2BP78356 416 aa23.55■■□□□ 1.36
AP3S2-216ENST00000617003 MSH6P52701 1360 aa23.55■■□□□ 1.36
AP3S2-216ENST00000617003 YTHDC2Q9H6S0 1430 aaKnown RBP23.54■■□□□ 1.36
AP3S2-216ENST00000617003 ABCC11Q96J66 1382 aa23.53■■□□□ 1.36
AP3S2-216ENST00000617003 C19orf44Q9H6X5 657 aa23.53■■□□□ 1.36
AP3S2-216ENST00000617003 PTCH1Q13635 1447 aa23.52■■□□□ 1.36
AP3S2-216ENST00000617003 PRAG1Q86YV5 1406 aa23.52■■□□□ 1.36
AP3S2-216ENST00000617003 SCAF1Q9H7N4 1312 aaKnown RBP23.52■■□□□ 1.36
AP3S2-216ENST00000617003 WAPLQ7Z5K2 1190 aa23.52■■□□□ 1.36
AP3S2-216ENST00000617003 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
AP3S2-216ENST00000617003 TONSLQ96HA7 1378 aa23.5■■□□□ 1.35
AP3S2-216ENST00000617003 ADGRB1O14514 1584 aa23.49■■□□□ 1.35
AP3S2-216ENST00000617003 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
AP3S2-216ENST00000617003 TECPR2O15040 1411 aa23.49■■□□□ 1.35
AP3S2-216ENST00000617003 NBPF1Q3BBV0 1214 aa23.48■■□□□ 1.35
AP3S2-216ENST00000617003 SIRT1Q96EB6 747 aa23.48■■□□□ 1.35
AP3S2-216ENST00000617003 KNDC1Q76NI1 1749 aa23.48■■□□□ 1.35
AP3S2-216ENST00000617003 ATF3P18847 181 aa23.48■■□□□ 1.35
AP3S2-216ENST00000617003 TRAK1Q9UPV9 953 aa23.48■■□□□ 1.35
AP3S2-216ENST00000617003 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
AP3S2-216ENST00000617003 KIAA1210Q9ULL0 1709 aa23.46■■□□□ 1.35
AP3S2-216ENST00000617003 CADPS2Q86UW7 1296 aa23.46■■□□□ 1.35
AP3S2-216ENST00000617003 PLEKHH1Q9ULM0 1364 aa23.46■■□□□ 1.35
AP3S2-216ENST00000617003 SLAIN2Q9P270 581 aa23.45■■□□□ 1.34
AP3S2-216ENST00000617003 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.34
AP3S2-216ENST00000617003 NBPF8Q3BBV2 869 aa23.44■■□□□ 1.34
AP3S2-216ENST00000617003 NALCNQ8IZF0 1738 aa23.44■■□□□ 1.34
AP3S2-216ENST00000617003 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
AP3S2-216ENST00000617003 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms