RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 PRKCSHP14314 528 aaPredicted RBP21.76■■□□□ 1.07
ATXN2-227ENST00000616825 DZIP1LQ8IYY4 767 aaKnown RBP21.76■■□□□ 1.07
ATXN2-227ENST00000616825 USP35Q9P2H5 1018 aa21.76■■□□□ 1.07
ATXN2-227ENST00000616825 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
ATXN2-227ENST00000616825 FKBP5Q13451 457 aaPredicted RBP21.74■■□□□ 1.07
ATXN2-227ENST00000616825 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
ATXN2-227ENST00000616825 AMER1Q5JTC6 1135 aaPredicted RBP21.74■■□□□ 1.07
ATXN2-227ENST00000616825 BECN2A8MW95 431 aa21.73■■□□□ 1.07
ATXN2-227ENST00000616825 PES1O00541 588 aaKnown RBP21.73■■□□□ 1.07
ATXN2-227ENST00000616825 WIZO95785 1651 aa21.73■■□□□ 1.07
ATXN2-227ENST00000616825 MYOM3Q5VTT5 1437 aa21.73■■□□□ 1.07
ATXN2-227ENST00000616825 IFIT2P09913 472 aaKnown RBP21.73■■□□□ 1.07
ATXN2-227ENST00000616825 GOLGA6L19H0YKK7 550 aa21.72■■□□□ 1.07
ATXN2-227ENST00000616825 TPD52L1Q16890 204 aaPredicted RBP21.72■■□□□ 1.07
ATXN2-227ENST00000616825 ARID3AQ99856 593 aa21.72■■□□□ 1.07
ATXN2-227ENST00000616825 SKOR2Q2VWA4 1001 aaPredicted RBP21.71■■□□□ 1.07
ATXN2-227ENST00000616825 TSR1Q2NL82 804 aaKnown RBP21.71■■□□□ 1.07
ATXN2-227ENST00000616825 NOL10Q9BSC4 688 aaKnown RBP21.71■■□□□ 1.07
ATXN2-227ENST00000616825 MSH5O43196 834 aa21.7■■□□□ 1.07
ATXN2-227ENST00000616825 GOLGA6L1Q8N7Z2 621 aa21.7■■□□□ 1.07
ATXN2-227ENST00000616825 RUNDC1Q96C34 613 aa21.7■■□□□ 1.07
ATXN2-227ENST00000616825 FOXD4L6Q3SYB3 417 aaPredicted RBP21.7■■□□□ 1.06
ATXN2-227ENST00000616825 MCTP1Q6DN14 999 aa21.7■■□□□ 1.06
ATXN2-227ENST00000616825 FOXD4L3Q6VB84 417 aaPredicted RBP21.7■■□□□ 1.06
ATXN2-227ENST00000616825 NECTIN2Q92692 538 aa21.7■■□□□ 1.06
ATXN2-227ENST00000616825 GNAI1P63096 354 aa21.7■■□□□ 1.06
ATXN2-227ENST00000616825 G3BP1Q13283 466 aaKnown RBP eCLIP21.7■■□□□ 1.06
ATXN2-227ENST00000616825 AMOTL1Q8IY63 956 aa21.69■■□□□ 1.06
ATXN2-227ENST00000616825 RAPGEF4Q8WZA2 1011 aa21.69■■□□□ 1.06
ATXN2-227ENST00000616825 CPLX1O14810 134 aa21.69■■□□□ 1.06
ATXN2-227ENST00000616825 PDE4CQ08493 712 aa21.69■■□□□ 1.06
ATXN2-227ENST00000616825 A0A0U1RQG5 324 aaPredicted RBP21.68■■□□□ 1.06
ATXN2-227ENST00000616825 SYTL4Q96C24 671 aaPredicted RBP21.68■■□□□ 1.06
ATXN2-227ENST00000616825 APPP05067 770 aa21.68■■□□□ 1.06
ATXN2-227ENST00000616825 SLC4A3P48751 1232 aa21.68■■□□□ 1.06
ATXN2-227ENST00000616825 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
ATXN2-227ENST00000616825 RNF20Q5VTR2 975 aa21.67■■□□□ 1.06
ATXN2-227ENST00000616825 TRDNQ13061 729 aa21.67■■□□□ 1.06
ATXN2-227ENST00000616825 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
ATXN2-227ENST00000616825 FAM69CQ0P6D2 419 aa21.66■■□□□ 1.06
ATXN2-227ENST00000616825 TRIM29Q14134 588 aa21.66■■□□□ 1.06
ATXN2-227ENST00000616825 ROCK1Q13464 1354 aa21.66■■□□□ 1.06
ATXN2-227ENST00000616825 ANO2Q9NQ90 1003 aa21.66■■□□□ 1.06
ATXN2-227ENST00000616825 IGF1RP08069 1367 aa21.65■■□□□ 1.06
ATXN2-227ENST00000616825 TPM1P09493 284 aa21.65■■□□□ 1.06
ATXN2-227ENST00000616825 TSPYL4Q9UJ04 414 aa21.65■■□□□ 1.06
ATXN2-227ENST00000616825 VPS37DQ86XT2 251 aa21.64■■□□□ 1.06
ATXN2-227ENST00000616825 ZNF644Q9H582 1327 aaPredicted RBP21.64■■□□□ 1.05
ATXN2-227ENST00000616825 GGNBP2Q9H3C7 697 aa21.63■■□□□ 1.05
ATXN2-227ENST00000616825 HMOX1P09601 288 aa21.61■■□□□ 1.05
ATXN2-227ENST00000616825 PRM3Q9NNZ6 103 aa21.61■■□□□ 1.05
ATXN2-227ENST00000616825 TRIM34Q9BYJ4 488 aa21.6■■□□□ 1.05
ATXN2-227ENST00000616825 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
ATXN2-227ENST00000616825 ATF3P18847 181 aa21.6■■□□□ 1.05
ATXN2-227ENST00000616825 NLRP2Q9NX02 1062 aa21.6■■□□□ 1.05
ATXN2-227ENST00000616825 TPM2P07951 284 aa21.59■■□□□ 1.05
ATXN2-227ENST00000616825 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
ATXN2-227ENST00000616825 RAD21O60216 631 aa21.59■■□□□ 1.05
ATXN2-227ENST00000616825 NLRP6P59044 892 aa21.59■■□□□ 1.05
ATXN2-227ENST00000616825 AAMPQ13685 434 aa21.59■■□□□ 1.05
ATXN2-227ENST00000616825 LNPKQ9C0E8 428 aa21.59■■□□□ 1.05
ATXN2-227ENST00000616825 ERC2O15083 957 aa21.58■■□□□ 1.05
ATXN2-227ENST00000616825 CHMP5Q9NZZ3 219 aa21.58■■□□□ 1.05
ATXN2-227ENST00000616825 CCDC47Q96A33 483 aaKnown RBP21.58■■□□□ 1.04
ATXN2-227ENST00000616825 DHX16O60231 1041 aaKnown RBP21.57■■□□□ 1.04
ATXN2-227ENST00000616825 IPO7O95373 1038 aaKnown RBP21.57■■□□□ 1.04
ATXN2-227ENST00000616825 INTS3Q68E01 1043 aaKnown RBP21.57■■□□□ 1.04
ATXN2-227ENST00000616825 CCDC7Q96M83 1385 aa21.57■■□□□ 1.04
ATXN2-227ENST00000616825 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
ATXN2-227ENST00000616825 GSE1Q14687 1217 aa21.56■■□□□ 1.04
ATXN2-227ENST00000616825 TNNT3P45378 269 aaPredicted RBP21.56■■□□□ 1.04
ATXN2-227ENST00000616825 TMEM132EQ6IEE7 984 aa21.56■■□□□ 1.04
ATXN2-227ENST00000616825 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
ATXN2-227ENST00000616825 CTDP1Q9Y5B0 961 aaPredicted RBP21.56■■□□□ 1.04
ATXN2-227ENST00000616825 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
ATXN2-227ENST00000616825 TCEAL9Q9UHQ7 104 aa21.55■■□□□ 1.04
ATXN2-227ENST00000616825 MIA2Q96PC5 1412 aa21.55■■□□□ 1.04
ATXN2-227ENST00000616825 ANKRD20A12PQ8NF67 263 aa21.55■■□□□ 1.04
ATXN2-227ENST00000616825 BICD2Q8TD16 824 aa21.55■■□□□ 1.04
ATXN2-227ENST00000616825 VPS37CA5D8V6 355 aaPredicted RBP21.54■■□□□ 1.04
ATXN2-227ENST00000616825 MTHFSP49914 203 aa21.54■■□□□ 1.04
ATXN2-227ENST00000616825 CCAR2Q8N163 923 aaKnown RBP21.54■■□□□ 1.04
ATXN2-227ENST00000616825 CABP2Q9NPB3 220 aa21.53■■□□□ 1.04
ATXN2-227ENST00000616825 SMC3Q9UQE7 1217 aa21.53■■□□□ 1.04
ATXN2-227ENST00000616825 ERICH2A1L162 156 aa21.53■■□□□ 1.04
ATXN2-227ENST00000616825 NUCB2P80303 420 aa21.52■■□□□ 1.04
ATXN2-227ENST00000616825 NFXL1Q6ZNB6 911 aa21.52■■□□□ 1.04
ATXN2-227ENST00000616825 NEUROD6Q96NK8 337 aa21.52■■□□□ 1.04
ATXN2-227ENST00000616825 AFAP1Q8N556 730 aa21.52■■□□□ 1.04
ATXN2-227ENST00000616825 UBTFL1P0CB47 393 aaPredicted RBP21.52■■□□□ 1.04
ATXN2-227ENST00000616825 RALYLQ86SE5 291 aaKnown RBP21.52■■□□□ 1.04
ATXN2-227ENST00000616825 HOOK1Q9UJC3 728 aaKnown RBP21.52■■□□□ 1.04
ATXN2-227ENST00000616825 AIMP1Q12904 312 aaKnown RBP21.51■■□□□ 1.03
ATXN2-227ENST00000616825 SAFBQ15424 915 aaKnown RBP eCLIP21.5■■□□□ 1.03
ATXN2-227ENST00000616825 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.5■■□□□ 1.03
ATXN2-227ENST00000616825 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
ATXN2-227ENST00000616825 TCP11L2Q8N4U5 519 aa21.5■■□□□ 1.03
ATXN2-227ENST00000616825 CFAP70Q5T0N1 1121 aa21.49■■□□□ 1.03
ATXN2-227ENST00000616825 NUTM2GQ5VZR2 741 aa21.49■■□□□ 1.03
ATXN2-227ENST00000616825 CLASRPQ8N2M8 674 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms