RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 MPHOSPH9Q99550 1183 aa20.52■□□□□ 0.88
UPK1A-203ENST00000616789 FOXD1Q16676 465 aa20.5■□□□□ 0.87
UPK1A-203ENST00000616789 RAB3GAP2Q9H2M9 1393 aa20.5■□□□□ 0.87
UPK1A-203ENST00000616789 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
UPK1A-203ENST00000616789 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
UPK1A-203ENST00000616789 LRRC7Q96NW7 1537 aa20.47■□□□□ 0.87
UPK1A-203ENST00000616789 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
UPK1A-203ENST00000616789 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
UPK1A-203ENST00000616789 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
UPK1A-203ENST00000616789 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.46■□□□□ 0.87
UPK1A-203ENST00000616789 KIF1BO60333 1816 aa20.45■□□□□ 0.86
UPK1A-203ENST00000616789 ACIN1Q9UKV3 1341 aaKnown RBP20.45■□□□□ 0.86
UPK1A-203ENST00000616789 HRCP23327 699 aa20.45■□□□□ 0.86
UPK1A-203ENST00000616789 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
UPK1A-203ENST00000616789 XIRP1Q702N8 1843 aaKnown RBP20.45■□□□□ 0.86
UPK1A-203ENST00000616789 ALKQ9UM73 1620 aa20.44■□□□□ 0.86
UPK1A-203ENST00000616789 NEXMIFQ5QGS0 1516 aa20.44■□□□□ 0.86
UPK1A-203ENST00000616789 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
UPK1A-203ENST00000616789 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
UPK1A-203ENST00000616789 CHD2O14647 1828 aaKnown RBP20.42■□□□□ 0.86
UPK1A-203ENST00000616789 KCNA6P17658 529 aa20.42■□□□□ 0.86
UPK1A-203ENST00000616789 NWD1Q149M9 1564 aa20.41■□□□□ 0.86
UPK1A-203ENST00000616789 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
UPK1A-203ENST00000616789 PPP1R15AO75807 674 aaPredicted RBP20.38■□□□□ 0.85
UPK1A-203ENST00000616789 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
UPK1A-203ENST00000616789 SPATA31E1Q6ZUB1 1445 aa20.38■□□□□ 0.85
UPK1A-203ENST00000616789 DIP2AQ14689 1571 aa20.37■□□□□ 0.85
UPK1A-203ENST00000616789 UBAP1LF5GYI3 381 aa20.36■□□□□ 0.85
UPK1A-203ENST00000616789 ZNF326Q5BKZ1 582 aaKnown RBP20.36■□□□□ 0.85
UPK1A-203ENST00000616789 PTPRUQ92729 1446 aa20.34■□□□□ 0.85
UPK1A-203ENST00000616789 PPLO60437 1756 aa20.34■□□□□ 0.85
UPK1A-203ENST00000616789 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
UPK1A-203ENST00000616789 BCANQ96GW7 911 aa20.34■□□□□ 0.85
UPK1A-203ENST00000616789 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
UPK1A-203ENST00000616789 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.84
UPK1A-203ENST00000616789 RPGRIP1LQ68CZ1 1315 aa20.33■□□□□ 0.84
UPK1A-203ENST00000616789 TMEM94Q12767 1356 aa20.32■□□□□ 0.84
UPK1A-203ENST00000616789 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
UPK1A-203ENST00000616789 SETD1AO15047 1707 aaKnown RBP20.3■□□□□ 0.84
UPK1A-203ENST00000616789 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
UPK1A-203ENST00000616789 METP08581 1390 aa20.3■□□□□ 0.84
UPK1A-203ENST00000616789 RBM33Q96EV2 1170 aaKnown RBP20.3■□□□□ 0.84
UPK1A-203ENST00000616789 TOM1O60784 492 aa20.29■□□□□ 0.84
UPK1A-203ENST00000616789 VGFO15240 615 aaPredicted RBP20.28■□□□□ 0.84
UPK1A-203ENST00000616789 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
UPK1A-203ENST00000616789 XRN1Q8IZH2 1706 aaKnown RBP20.27■□□□□ 0.84
UPK1A-203ENST00000616789 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
UPK1A-203ENST00000616789 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
UPK1A-203ENST00000616789 RGL3Q3MIN7 710 aa20.24■□□□□ 0.83
UPK1A-203ENST00000616789 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
UPK1A-203ENST00000616789 PIP4K2BP78356 416 aa20.22■□□□□ 0.83
UPK1A-203ENST00000616789 NRXN1Q9ULB1 1477 aa20.2■□□□□ 0.82
UPK1A-203ENST00000616789 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
UPK1A-203ENST00000616789 PIK3C2GO75747 1445 aa20.18■□□□□ 0.82
UPK1A-203ENST00000616789 HSPA1LP34931 641 aa20.18■□□□□ 0.82
UPK1A-203ENST00000616789 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
UPK1A-203ENST00000616789 FAM135BQ49AJ0 1406 aa20.16■□□□□ 0.82
UPK1A-203ENST00000616789 ASXL1Q8IXJ9 1541 aa20.15■□□□□ 0.82
UPK1A-203ENST00000616789 MSH6P52701 1360 aa20.15■□□□□ 0.82
UPK1A-203ENST00000616789 MYOM2P54296 1465 aa20.14■□□□□ 0.82
UPK1A-203ENST00000616789 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
UPK1A-203ENST00000616789 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
UPK1A-203ENST00000616789 DHX57Q6P158 1386 aaKnown RBP20.13■□□□□ 0.81
UPK1A-203ENST00000616789 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
UPK1A-203ENST00000616789 PTCH1Q13635 1447 aa20.12■□□□□ 0.81
UPK1A-203ENST00000616789 C14orf93Q9H972 538 aaKnown RBP20.11■□□□□ 0.81
UPK1A-203ENST00000616789 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
UPK1A-203ENST00000616789 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
UPK1A-203ENST00000616789 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
UPK1A-203ENST00000616789 TECPR2O15040 1411 aa20.09■□□□□ 0.81
UPK1A-203ENST00000616789 NALCNQ8IZF0 1738 aa20.08■□□□□ 0.81
UPK1A-203ENST00000616789 DCCP43146 1447 aa20.08■□□□□ 0.8
UPK1A-203ENST00000616789 TMEM132EQ6IEE7 984 aa20.08■□□□□ 0.8
UPK1A-203ENST00000616789 CFAP70Q5T0N1 1121 aa20.07■□□□□ 0.8
UPK1A-203ENST00000616789 ADGRL3Q9HAR2 1447 aa20.06■□□□□ 0.8
UPK1A-203ENST00000616789 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
UPK1A-203ENST00000616789 ABCC11Q96J66 1382 aa20.06■□□□□ 0.8
UPK1A-203ENST00000616789 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
UPK1A-203ENST00000616789 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
UPK1A-203ENST00000616789 DCAF11Q8TEB1 546 aa20.04■□□□□ 0.8
UPK1A-203ENST00000616789 LAMC1P11047 1609 aa20.03■□□□□ 0.8
UPK1A-203ENST00000616789 ATF3P18847 181 aa20.03■□□□□ 0.8
UPK1A-203ENST00000616789 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
UPK1A-203ENST00000616789 STAC3Q96MF2 364 aa20.03■□□□□ 0.8
UPK1A-203ENST00000616789 MST1RQ04912 1400 aa20.03■□□□□ 0.8
UPK1A-203ENST00000616789 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
UPK1A-203ENST00000616789 ADGRB1O14514 1584 aa20.03■□□□□ 0.8
UPK1A-203ENST00000616789 KDM2AQ9Y2K7 1162 aa20.01■□□□□ 0.79
UPK1A-203ENST00000616789 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
UPK1A-203ENST00000616789 SIRT1Q96EB6 747 aa20■□□□□ 0.79
UPK1A-203ENST00000616789 STK26Q9P289 416 aa20■□□□□ 0.79
UPK1A-203ENST00000616789 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
UPK1A-203ENST00000616789 BRINP3Q76B58 766 aa19.98■□□□□ 0.79
UPK1A-203ENST00000616789 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
UPK1A-203ENST00000616789 COL16A1Q07092 1604 aaPredicted RBP19.96■□□□□ 0.79
UPK1A-203ENST00000616789 C1orf167Q5SNV9 1468 aa19.95■□□□□ 0.78
UPK1A-203ENST00000616789 AHDC1Q5TGY3 1603 aaPredicted RBP19.95■□□□□ 0.78
UPK1A-203ENST00000616789 PHLPP1O60346 1717 aa19.94■□□□□ 0.78
UPK1A-203ENST00000616789 DLC1Q96QB1 1528 aa19.93■□□□□ 0.78
UPK1A-203ENST00000616789 CDC42BPGQ6DT37 1551 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms