RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 ZFYVE9O95405 1425 aa33.12■■■□□ 2.89
CBWD3-212ENST00000616550 UBAP1LF5GYI3 381 aa33.09■■■□□ 2.89
CBWD3-212ENST00000616550 SLC26A8Q96RN1 970 aa33.09■■■□□ 2.89
CBWD3-212ENST00000616550 STRCP1A6NGW2 1772 aa33.09■■■□□ 2.89
CBWD3-212ENST00000616550 PLEKHG1Q9ULL1 1385 aa33.06■■■□□ 2.88
CBWD3-212ENST00000616550 ACIN1Q9UKV3 1341 aaKnown RBP33.05■■■□□ 2.88
CBWD3-212ENST00000616550 SETD5Q9C0A6 1442 aa33.05■■■□□ 2.88
CBWD3-212ENST00000616550 SENP3Q9H4L4 574 aaPredicted RBP33.05■■■□□ 2.88
CBWD3-212ENST00000616550 TRPM2O94759 1503 aa33.05■■■□□ 2.88
CBWD3-212ENST00000616550 NUTM2DQ5VT03 806 aaPredicted RBP33.04■■■□□ 2.88
CBWD3-212ENST00000616550 ZNF326Q5BKZ1 582 aaKnown RBP33.02■■■□□ 2.88
CBWD3-212ENST00000616550 CLTCL1P53675 1640 aa33.01■■■□□ 2.87
CBWD3-212ENST00000616550 LRRC7Q96NW7 1537 aa33■■■□□ 2.87
CBWD3-212ENST00000616550 TOM1O60784 492 aa32.99■■■□□ 2.87
CBWD3-212ENST00000616550 KCNA6P17658 529 aa32.99■■■□□ 2.87
CBWD3-212ENST00000616550 MPHOSPH9Q99550 1183 aa32.99■■■□□ 2.87
CBWD3-212ENST00000616550 KIF1BO60333 1816 aa32.98■■■□□ 2.87
CBWD3-212ENST00000616550 FOXD1Q16676 465 aa32.96■■■□□ 2.87
CBWD3-212ENST00000616550 TBX22Q9Y458 520 aa32.94■■■□□ 2.86
CBWD3-212ENST00000616550 RAB3GAP2Q9H2M9 1393 aa32.91■■■□□ 2.86
CBWD3-212ENST00000616550 SCAF1Q9H7N4 1312 aaKnown RBP32.89■■■□□ 2.86
CBWD3-212ENST00000616550 PIP4K2BP78356 416 aa32.88■■■□□ 2.85
CBWD3-212ENST00000616550 PROSER2Q86WR7 435 aaPredicted RBP32.88■■■□□ 2.85
CBWD3-212ENST00000616550 ADAMTS13Q76LX8 1427 aa32.86■■■□□ 2.85
CBWD3-212ENST00000616550 DIP2AQ14689 1571 aa32.86■■■□□ 2.85
CBWD3-212ENST00000616550 CHD2O14647 1828 aaKnown RBP32.85■■■□□ 2.85
CBWD3-212ENST00000616550 NWD1Q149M9 1564 aa32.84■■■□□ 2.85
CBWD3-212ENST00000616550 XIRP1Q702N8 1843 aaKnown RBP32.84■■■□□ 2.85
CBWD3-212ENST00000616550 NKTRP30414 1462 aaKnown RBP32.83■■■□□ 2.85
CBWD3-212ENST00000616550 TMEM94Q12767 1356 aa32.83■■■□□ 2.85
CBWD3-212ENST00000616550 NEXMIFQ5QGS0 1516 aa32.82■■■□□ 2.85
CBWD3-212ENST00000616550 CCDC144AA2RUR9 1427 aa32.82■■■□□ 2.84
CBWD3-212ENST00000616550 RPGRIP1LQ68CZ1 1315 aa32.8■■■□□ 2.84
CBWD3-212ENST00000616550 PIK3R4Q99570 1358 aa32.8■■■□□ 2.84
CBWD3-212ENST00000616550 VGFO15240 615 aaPredicted RBP32.79■■■□□ 2.84
CBWD3-212ENST00000616550 RBM33Q96EV2 1170 aaKnown RBP32.78■■■□□ 2.84
CBWD3-212ENST00000616550 HRCP23327 699 aa32.77■■■□□ 2.84
CBWD3-212ENST00000616550 SETBP1Q9Y6X0 1596 aa32.77■■■□□ 2.84
CBWD3-212ENST00000616550 ALKQ9UM73 1620 aa32.75■■■□□ 2.83
CBWD3-212ENST00000616550 NRXN3Q9Y4C0 1643 aa32.74■■■□□ 2.83
CBWD3-212ENST00000616550 AMOTL2Q9Y2J4 779 aa32.72■■■□□ 2.83
CBWD3-212ENST00000616550 RGL3Q3MIN7 710 aa32.7■■■□□ 2.83
CBWD3-212ENST00000616550 PPLO60437 1756 aa32.68■■■□□ 2.82
CBWD3-212ENST00000616550 MSH6P52701 1360 aa32.68■■■□□ 2.82
CBWD3-212ENST00000616550 HSPA1LP34931 641 aa32.67■■■□□ 2.82
CBWD3-212ENST00000616550 PTPRUQ92729 1446 aa32.67■■■□□ 2.82
CBWD3-212ENST00000616550 METP08581 1390 aa32.66■■■□□ 2.82
CBWD3-212ENST00000616550 C14orf37Q86TY3 774 aa32.65■■■□□ 2.82
CBWD3-212ENST00000616550 SPATA31E1Q6ZUB1 1445 aa32.65■■■□□ 2.82
CBWD3-212ENST00000616550 NCOA3Q9Y6Q9 1424 aa32.65■■■□□ 2.82
CBWD3-212ENST00000616550 ANKRD30BQ9BXX2 1392 aa32.59■■■□□ 2.81
CBWD3-212ENST00000616550 XRN1Q8IZH2 1706 aaKnown RBP32.58■■■□□ 2.81
CBWD3-212ENST00000616550 C19orf44Q9H6X5 657 aa32.56■■■□□ 2.8
CBWD3-212ENST00000616550 ADGRF5Q8IZF2 1346 aa32.55■■■□□ 2.8
CBWD3-212ENST00000616550 FAM135BQ49AJ0 1406 aa32.55■■■□□ 2.8
CBWD3-212ENST00000616550 SLAIN2Q9P270 581 aa32.54■■■□□ 2.8
CBWD3-212ENST00000616550 IFT172Q9UG01 1749 aa32.54■■■□□ 2.8
CBWD3-212ENST00000616550 SETD1AO15047 1707 aaKnown RBP32.52■■■□□ 2.8
CBWD3-212ENST00000616550 ATF3P18847 181 aa32.52■■■□□ 2.8
CBWD3-212ENST00000616550 CADPS2Q86UW7 1296 aa32.51■■■□□ 2.79
CBWD3-212ENST00000616550 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.5■■■□□ 2.79
CBWD3-212ENST00000616550 ROBO1Q9Y6N7 1651 aa32.46■■■□□ 2.79
CBWD3-212ENST00000616550 DISP3Q9P2K9 1392 aa32.45■■■□□ 2.78
CBWD3-212ENST00000616550 PIK3C2GO75747 1445 aa32.42■■■□□ 2.78
CBWD3-212ENST00000616550 PTCH1Q13635 1447 aa32.41■■■□□ 2.78
CBWD3-212ENST00000616550 DCCP43146 1447 aa32.4■■■□□ 2.78
CBWD3-212ENST00000616550 ROBO2Q9HCK4 1378 aa32.38■■■□□ 2.77
CBWD3-212ENST00000616550 MYOM2P54296 1465 aa32.37■■■□□ 2.77
CBWD3-212ENST00000616550 ADGRL3Q9HAR2 1447 aa32.37■■■□□ 2.77
CBWD3-212ENST00000616550 PRAG1Q86YV5 1406 aa32.36■■■□□ 2.77
CBWD3-212ENST00000616550 TMEM132EQ6IEE7 984 aa32.35■■■□□ 2.77
CBWD3-212ENST00000616550 C14orf93Q9H972 538 aaKnown RBP32.35■■■□□ 2.77
CBWD3-212ENST00000616550 STK26Q9P289 416 aa32.35■■■□□ 2.77
CBWD3-212ENST00000616550 NRXN1Q9ULB1 1477 aa32.34■■■□□ 2.77
CBWD3-212ENST00000616550 DCAF11Q8TEB1 546 aa32.33■■■□□ 2.77
CBWD3-212ENST00000616550 KDM2AQ9Y2K7 1162 aa32.33■■■□□ 2.77
CBWD3-212ENST00000616550 NALCNQ8IZF0 1738 aa32.32■■■□□ 2.76
CBWD3-212ENST00000616550 LRPPRCP42704 1394 aaKnown RBP32.32■■■□□ 2.76
CBWD3-212ENST00000616550 CFAP70Q5T0N1 1121 aa32.31■■■□□ 2.76
CBWD3-212ENST00000616550 STAC3Q96MF2 364 aa32.3■■■□□ 2.76
CBWD3-212ENST00000616550 PHLPP1O60346 1717 aa32.29■■■□□ 2.76
CBWD3-212ENST00000616550 LAMC1P11047 1609 aa32.28■■■□□ 2.76
CBWD3-212ENST00000616550 ABCC11Q96J66 1382 aa32.28■■■□□ 2.76
CBWD3-212ENST00000616550 MST1RQ04912 1400 aa32.27■■■□□ 2.76
CBWD3-212ENST00000616550 ASXL1Q8IXJ9 1541 aa32.27■■■□□ 2.76
CBWD3-212ENST00000616550 BRINP3Q76B58 766 aa32.26■■■□□ 2.75
CBWD3-212ENST00000616550 DHX57Q6P158 1386 aaKnown RBP32.26■■■□□ 2.75
CBWD3-212ENST00000616550 MED1Q15648 1581 aaPredicted RBP32.26■■■□□ 2.75
CBWD3-212ENST00000616550 TECPR2O15040 1411 aa32.26■■■□□ 2.75
CBWD3-212ENST00000616550 YTHDC2Q9H6S0 1430 aaKnown RBP32.26■■■□□ 2.75
CBWD3-212ENST00000616550 TRIM26Q12899 539 aaPredicted RBP32.25■■■□□ 2.75
CBWD3-212ENST00000616550 WAPLQ7Z5K2 1190 aa32.23■■■□□ 2.75
CBWD3-212ENST00000616550 KNDC1Q76NI1 1749 aa32.23■■■□□ 2.75
CBWD3-212ENST00000616550 SIRT1Q96EB6 747 aa32.19■■■□□ 2.74
CBWD3-212ENST00000616550 AHDC1Q5TGY3 1603 aaPredicted RBP32.18■■■□□ 2.74
CBWD3-212ENST00000616550 C1orf167Q5SNV9 1468 aa32.16■■■□□ 2.74
CBWD3-212ENST00000616550 COL16A1Q07092 1604 aaPredicted RBP32.15■■■□□ 2.74
CBWD3-212ENST00000616550 PHF23Q9BUL5 403 aaPredicted RBP32.15■■■□□ 2.74
CBWD3-212ENST00000616550 JCADQ9P266 1359 aa32.15■■■□□ 2.74
CBWD3-212ENST00000616550 PLEKHH1Q9ULM0 1364 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms