RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 CPS1P31327 1500 aa25.46■■□□□ 1.67
LHX1-202ENST00000616237 FOXD1Q16676 465 aa25.44■■□□□ 1.66
LHX1-202ENST00000616237 NUTM2DQ5VT03 806 aaPredicted RBP25.44■■□□□ 1.66
LHX1-202ENST00000616237 SLC26A8Q96RN1 970 aa25.44■■□□□ 1.66
LHX1-202ENST00000616237 MPHOSPH9Q99550 1183 aa25.43■■□□□ 1.66
LHX1-202ENST00000616237 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
LHX1-202ENST00000616237 RAB3GAP2Q9H2M9 1393 aa25.43■■□□□ 1.66
LHX1-202ENST00000616237 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
LHX1-202ENST00000616237 PPP1R15AO75807 674 aaPredicted RBP25.39■■□□□ 1.65
LHX1-202ENST00000616237 HDGFP51858 240 aaKnown RBP25.39■■□□□ 1.65
LHX1-202ENST00000616237 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.39■■□□□ 1.65
LHX1-202ENST00000616237 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
LHX1-202ENST00000616237 BCANQ96GW7 911 aa25.35■■□□□ 1.65
LHX1-202ENST00000616237 ADAMTS13Q76LX8 1427 aa25.34■■□□□ 1.65
LHX1-202ENST00000616237 ZNF326Q5BKZ1 582 aaKnown RBP25.33■■□□□ 1.65
LHX1-202ENST00000616237 KCNA6P17658 529 aa25.32■■□□□ 1.64
LHX1-202ENST00000616237 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
LHX1-202ENST00000616237 KIF1BO60333 1816 aa25.32■■□□□ 1.64
LHX1-202ENST00000616237 UBAP1LF5GYI3 381 aa25.31■■□□□ 1.64
LHX1-202ENST00000616237 NEXMIFQ5QGS0 1516 aa25.31■■□□□ 1.64
LHX1-202ENST00000616237 TBX22Q9Y458 520 aa25.3■■□□□ 1.64
LHX1-202ENST00000616237 NWD1Q149M9 1564 aa25.27■■□□□ 1.64
LHX1-202ENST00000616237 ALKQ9UM73 1620 aa25.27■■□□□ 1.64
LHX1-202ENST00000616237 NRXN3Q9Y4C0 1643 aa25.27■■□□□ 1.64
LHX1-202ENST00000616237 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
LHX1-202ENST00000616237 HRCP23327 699 aa25.25■■□□□ 1.63
LHX1-202ENST00000616237 CCDC144AA2RUR9 1427 aa25.25■■□□□ 1.63
LHX1-202ENST00000616237 DIP2AQ14689 1571 aa25.24■■□□□ 1.63
LHX1-202ENST00000616237 SETBP1Q9Y6X0 1596 aa25.24■■□□□ 1.63
LHX1-202ENST00000616237 CHD2O14647 1828 aaKnown RBP25.23■■□□□ 1.63
LHX1-202ENST00000616237 TMEM94Q12767 1356 aa25.23■■□□□ 1.63
LHX1-202ENST00000616237 RBM33Q96EV2 1170 aaKnown RBP25.22■■□□□ 1.63
LHX1-202ENST00000616237 NKTRP30414 1462 aaKnown RBP25.22■■□□□ 1.63
LHX1-202ENST00000616237 SPATA31E1Q6ZUB1 1445 aa25.21■■□□□ 1.63
LHX1-202ENST00000616237 TOM1O60784 492 aa25.21■■□□□ 1.63
LHX1-202ENST00000616237 PTPRUQ92729 1446 aa25.2■■□□□ 1.62
LHX1-202ENST00000616237 PROSER2Q86WR7 435 aaPredicted RBP25.19■■□□□ 1.62
LHX1-202ENST00000616237 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
LHX1-202ENST00000616237 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
LHX1-202ENST00000616237 PIP4K2BP78356 416 aa25.17■■□□□ 1.62
LHX1-202ENST00000616237 METP08581 1390 aa25.16■■□□□ 1.62
LHX1-202ENST00000616237 PPLO60437 1756 aa25.16■■□□□ 1.62
LHX1-202ENST00000616237 VGFO15240 615 aaPredicted RBP25.16■■□□□ 1.62
LHX1-202ENST00000616237 RGL3Q3MIN7 710 aa25.16■■□□□ 1.62
LHX1-202ENST00000616237 ANKRD30BQ9BXX2 1392 aa25.15■■□□□ 1.62
LHX1-202ENST00000616237 AMOTL2Q9Y2J4 779 aa25.14■■□□□ 1.61
LHX1-202ENST00000616237 SCAF1Q9H7N4 1312 aaKnown RBP25.13■■□□□ 1.61
LHX1-202ENST00000616237 ADGRF5Q8IZF2 1346 aa25.1■■□□□ 1.61
LHX1-202ENST00000616237 SETD1AO15047 1707 aaKnown RBP25.09■■□□□ 1.61
LHX1-202ENST00000616237 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
LHX1-202ENST00000616237 IFT172Q9UG01 1749 aa25.09■■□□□ 1.61
LHX1-202ENST00000616237 HSPA1LP34931 641 aa25.05■■□□□ 1.6
LHX1-202ENST00000616237 NCOA3Q9Y6Q9 1424 aa25.05■■□□□ 1.6
LHX1-202ENST00000616237 MSH6P52701 1360 aa25.04■■□□□ 1.6
LHX1-202ENST00000616237 PIK3C2GO75747 1445 aa25■■□□□ 1.59
LHX1-202ENST00000616237 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
LHX1-202ENST00000616237 C14orf37Q86TY3 774 aa24.97■■□□□ 1.59
LHX1-202ENST00000616237 C19orf44Q9H6X5 657 aa24.97■■□□□ 1.59
LHX1-202ENST00000616237 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.97■■□□□ 1.59
LHX1-202ENST00000616237 NRXN1Q9ULB1 1477 aa24.97■■□□□ 1.59
LHX1-202ENST00000616237 MYOM2P54296 1465 aa24.96■■□□□ 1.59
LHX1-202ENST00000616237 ASXL1Q8IXJ9 1541 aa24.96■■□□□ 1.59
LHX1-202ENST00000616237 ROBO2Q9HCK4 1378 aa24.95■■□□□ 1.59
LHX1-202ENST00000616237 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.58
LHX1-202ENST00000616237 SLAIN2Q9P270 581 aa24.94■■□□□ 1.58
LHX1-202ENST00000616237 PTCH1Q13635 1447 aa24.94■■□□□ 1.58
LHX1-202ENST00000616237 ROBO1Q9Y6N7 1651 aa24.92■■□□□ 1.58
LHX1-202ENST00000616237 TRIM26Q12899 539 aaPredicted RBP24.92■■□□□ 1.58
LHX1-202ENST00000616237 TMEM132EQ6IEE7 984 aa24.92■■□□□ 1.58
LHX1-202ENST00000616237 DHX57Q6P158 1386 aaKnown RBP24.91■■□□□ 1.58
LHX1-202ENST00000616237 CADPS2Q86UW7 1296 aa24.91■■□□□ 1.58
LHX1-202ENST00000616237 C14orf93Q9H972 538 aaKnown RBP24.91■■□□□ 1.58
LHX1-202ENST00000616237 ADGRL3Q9HAR2 1447 aa24.9■■□□□ 1.58
LHX1-202ENST00000616237 ATF3P18847 181 aa24.89■■□□□ 1.57
LHX1-202ENST00000616237 CFAP70Q5T0N1 1121 aa24.89■■□□□ 1.57
LHX1-202ENST00000616237 DCCP43146 1447 aa24.88■■□□□ 1.57
LHX1-202ENST00000616237 NALCNQ8IZF0 1738 aa24.88■■□□□ 1.57
LHX1-202ENST00000616237 DCAF11Q8TEB1 546 aa24.88■■□□□ 1.57
LHX1-202ENST00000616237 LRPPRCP42704 1394 aaKnown RBP24.88■■□□□ 1.57
LHX1-202ENST00000616237 STK26Q9P289 416 aa24.86■■□□□ 1.57
LHX1-202ENST00000616237 KDM2AQ9Y2K7 1162 aa24.86■■□□□ 1.57
LHX1-202ENST00000616237 TECPR2O15040 1411 aa24.86■■□□□ 1.57
LHX1-202ENST00000616237 ABCC11Q96J66 1382 aa24.85■■□□□ 1.57
LHX1-202ENST00000616237 MST1RQ04912 1400 aa24.84■■□□□ 1.57
LHX1-202ENST00000616237 YTHDC2Q9H6S0 1430 aaKnown RBP24.84■■□□□ 1.57
LHX1-202ENST00000616237 LAMC1P11047 1609 aa24.82■■□□□ 1.56
LHX1-202ENST00000616237 WAPLQ7Z5K2 1190 aa24.81■■□□□ 1.56
LHX1-202ENST00000616237 PLEKHH1Q9ULM0 1364 aa24.81■■□□□ 1.56
LHX1-202ENST00000616237 KNDC1Q76NI1 1749 aa24.8■■□□□ 1.56
LHX1-202ENST00000616237 BRINP3Q76B58 766 aa24.8■■□□□ 1.56
LHX1-202ENST00000616237 ADGRB1O14514 1584 aa24.79■■□□□ 1.56
LHX1-202ENST00000616237 STAC3Q96MF2 364 aa24.79■■□□□ 1.56
LHX1-202ENST00000616237 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
LHX1-202ENST00000616237 DISP3Q9P2K9 1392 aa24.76■■□□□ 1.55
LHX1-202ENST00000616237 SIRT1Q96EB6 747 aa24.75■■□□□ 1.55
LHX1-202ENST00000616237 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
LHX1-202ENST00000616237 PHLPP1O60346 1717 aa24.74■■□□□ 1.55
LHX1-202ENST00000616237 MED1Q15648 1581 aaPredicted RBP24.73■■□□□ 1.55
LHX1-202ENST00000616237 COL16A1Q07092 1604 aaPredicted RBP24.72■■□□□ 1.55
LHX1-202ENST00000616237 AHDC1Q5TGY3 1603 aaPredicted RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms